RNA–Protein interactions for RNA: ENST00000373020.8

TSPAN6-201, Transcript of tetraspanin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN6, Length 2,206 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6-201ENST00000373020 GMLQ99445 158 aa13.68□□□□□ -0.22
TSPAN6-201ENST00000373020 ZNF70Q9UC06 446 aaPredicted RBP13.68□□□□□ -0.22
TSPAN6-201ENST00000373020 RRP15Q9Y3B9 282 aaKnown RBP13.68□□□□□ -0.22
TSPAN6-201ENST00000373020 TCP10L2B9ZVM9 353 aa13.67□□□□□ -0.22
TSPAN6-201ENST00000373020 PGRMC1O00264 195 aaKnown RBP13.67□□□□□ -0.22
TSPAN6-201ENST00000373020 PPIP5K2O43314 1243 aa13.67□□□□□ -0.22
TSPAN6-201ENST00000373020 ARP10275 920 aa13.67□□□□□ -0.22
TSPAN6-201ENST00000373020 ECHS1P30084 290 aa13.67□□□□□ -0.22
TSPAN6-201ENST00000373020 CBWD6Q4V339 395 aa13.67□□□□□ -0.22
TSPAN6-201ENST00000373020 CBWD3Q5JTY5 395 aa13.67□□□□□ -0.22
TSPAN6-201ENST00000373020 CBWD5Q5RIA9 395 aa13.67□□□□□ -0.22
TSPAN6-201ENST00000373020 RSBN1LQ6PCB5 846 aaPredicted RBP13.67□□□□□ -0.22
TSPAN6-201ENST00000373020 NT5DC3Q86UY8 548 aa13.67□□□□□ -0.22
TSPAN6-201ENST00000373020 DNAAF5Q86Y56 855 aa13.67□□□□□ -0.22
TSPAN6-201ENST00000373020 SYCE1Q8N0S2 351 aa13.67□□□□□ -0.22
TSPAN6-201ENST00000373020 DAW1Q8N136 415 aa13.67□□□□□ -0.22
TSPAN6-201ENST00000373020 C1orf131Q8NDD1 294 aaKnown RBP13.67□□□□□ -0.22
TSPAN6-201ENST00000373020 TMEM174Q8WUU8 243 aa13.67□□□□□ -0.22
TSPAN6-201ENST00000373020 LMBR1Q8WVP7 490 aa13.67□□□□□ -0.22
TSPAN6-201ENST00000373020 RIT2Q99578 217 aa13.67□□□□□ -0.22
TSPAN6-201ENST00000373020 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.67□□□□□ -0.221e-6■□□□□ 8.5
TSPAN6-201ENST00000373020 LXNQ9BS40 222 aa13.67□□□□□ -0.22
TSPAN6-201ENST00000373020 ZNF577Q9BSK1 485 aa13.67□□□□□ -0.22
TSPAN6-201ENST00000373020 TEKT3Q9BXF9 490 aa13.67□□□□□ -0.22
TSPAN6-201ENST00000373020 ISCUQ9H1K1 167 aa13.67□□□□□ -0.22
TSPAN6-201ENST00000373020 LCMT1Q9UIC8 334 aa13.67□□□□□ -0.22
TSPAN6-201ENST00000373020 NOC2LQ9Y3T9 749 aaKnown RBP13.67□□□□□ -0.22
TSPAN6-201ENST00000373020 RPTORQ8N122 1335 aa13.67□□□□□ -0.22
TSPAN6-201ENST00000373020 TBC1D12O60347 775 aa13.67□□□□□ -0.22
TSPAN6-201ENST00000373020 BCRP11274 1271 aa13.67□□□□□ -0.22
TSPAN6-201ENST00000373020 LMNB1P20700 586 aa13.67□□□□□ -0.22
TSPAN6-201ENST00000373020 HSPA9P38646 679 aaKnown RBP13.67□□□□□ -0.22
TSPAN6-201ENST00000373020 NOP2P46087 812 aaKnown RBP13.67□□□□□ -0.22
TSPAN6-201ENST00000373020 HSD17B4P51659 736 aa13.67□□□□□ -0.22
TSPAN6-201ENST00000373020 ERVK-9P63128 1117 aa13.67□□□□□ -0.22
TSPAN6-201ENST00000373020 UBXN2AP68543 259 aa13.67□□□□□ -0.22
TSPAN6-201ENST00000373020 SPDYE2Q495Y8 402 aa13.67□□□□□ -0.22
TSPAN6-201ENST00000373020 FMNL3Q8IVF7 1028 aa13.67□□□□□ -0.22
TSPAN6-201ENST00000373020 U2AF1L4Q8WU68 220 aaKnown RBP13.67□□□□□ -0.22
TSPAN6-201ENST00000373020 HES6Q96HZ4 224 aa13.67□□□□□ -0.22
TSPAN6-201ENST00000373020 CCDC43Q96MW1 224 aaKnown RBP13.67□□□□□ -0.22
TSPAN6-201ENST00000373020 RUFY1Q96T51 708 aa13.67□□□□□ -0.22
TSPAN6-201ENST00000373020 INTS2Q9H0H0 1204 aaKnown RBP13.67□□□□□ -0.22
TSPAN6-201ENST00000373020 TSPYL1Q9H0U9 437 aa13.67□□□□□ -0.22
TSPAN6-201ENST00000373020 TAF1DQ9H5J8 278 aaPredicted RBP13.67□□□□□ -0.22
TSPAN6-201ENST00000373020 COL4A5P29400 1685 aa13.66□□□□□ -0.22
TSPAN6-201ENST00000373020 CCDC188H7C350 402 aa13.66□□□□□ -0.22
TSPAN6-201ENST00000373020 MYO1CO00159 1063 aa13.66□□□□□ -0.22
TSPAN6-201ENST00000373020 TMEM253P0C7T8 217 aa13.66□□□□□ -0.22
TSPAN6-201ENST00000373020 RFX1P22670 979 aa13.66□□□□□ -0.22
TSPAN6-201ENST00000373020 IRAK1P51617 712 aa13.66□□□□□ -0.22
TSPAN6-201ENST00000373020 GALCP54803 685 aa13.66□□□□□ -0.22
TSPAN6-201ENST00000373020 GHRHRQ02643 423 aa13.66□□□□□ -0.22
TSPAN6-201ENST00000373020 DRAP1Q14919 205 aaPredicted RBP13.66□□□□□ -0.22
TSPAN6-201ENST00000373020 ODR4Q5SWX8 454 aa13.66□□□□□ -0.22
TSPAN6-201ENST00000373020 CFAP58Q5T655 872 aa13.66□□□□□ -0.22
TSPAN6-201ENST00000373020 EMC10Q5UCC4 262 aa13.66□□□□□ -0.22
TSPAN6-201ENST00000373020 FKBP1CQ5VVH2 108 aa13.66□□□□□ -0.22
TSPAN6-201ENST00000373020 PEX26Q7Z412 305 aa13.66□□□□□ -0.22
TSPAN6-201ENST00000373020 LDHDQ86WU2 507 aa13.66□□□□□ -0.22
TSPAN6-201ENST00000373020 KSR1Q8IVT5 923 aa13.66□□□□□ -0.22
TSPAN6-201ENST00000373020 RFFLQ8WZ73 363 aa13.66□□□□□ -0.22
TSPAN6-201ENST00000373020 MXRA8Q9BRK3 442 aa13.66□□□□□ -0.22
TSPAN6-201ENST00000373020 APEX2Q9UBZ4 518 aa13.66□□□□□ -0.22
TSPAN6-201ENST00000373020 DNAJC12Q9UKB3 198 aa13.66□□□□□ -0.22
TSPAN6-201ENST00000373020 TTC7AQ9ULT0 858 aaPredicted RBP13.66□□□□□ -0.22
TSPAN6-201ENST00000373020 CLRN2A0PK11 232 aa13.66□□□□□ -0.22
TSPAN6-201ENST00000373020 ZNF233A6NK53 670 aa13.66□□□□□ -0.22
TSPAN6-201ENST00000373020 IPO5O00410 1097 aaKnown RBP13.66□□□□□ -0.22
TSPAN6-201ENST00000373020 CEP104O60308 925 aa13.66□□□□□ -0.22
TSPAN6-201ENST00000373020 MYL7Q01449 175 aa13.66□□□□□ -0.22
TSPAN6-201ENST00000373020 PPATQ06203 517 aa13.66□□□□□ -0.22
TSPAN6-201ENST00000373020 BFSP1Q12934 665 aa13.66□□□□□ -0.22
TSPAN6-201ENST00000373020 CUL1Q13616 776 aa13.66□□□□□ -0.22
TSPAN6-201ENST00000373020 KLHL7Q8IXQ5 586 aa13.66□□□□□ -0.22
TSPAN6-201ENST00000373020 BANK1Q8NDB2 785 aa13.66□□□□□ -0.22
TSPAN6-201ENST00000373020 LMO3Q8TAP4 145 aa13.66□□□□□ -0.22
TSPAN6-201ENST00000373020 IFT81Q8WYA0 676 aa13.66□□□□□ -0.22
TSPAN6-201ENST00000373020 CAPS2Q9BXY5 557 aa13.66□□□□□ -0.22
TSPAN6-201ENST00000373020 FEZ2Q9UHY8 353 aaPredicted RBP13.66□□□□□ -0.22
TSPAN6-201ENST00000373020 FEM1BQ9UK73 627 aa13.66□□□□□ -0.22
TSPAN6-201ENST00000373020 FRMD4BQ9Y2L6 1034 aa13.66□□□□□ -0.22
TSPAN6-201ENST00000373020 HIP1RO75146 1068 aa13.65□□□□□ -0.22
TSPAN6-201ENST00000373020 TRIM49P0CI25 452 aa13.65□□□□□ -0.22
TSPAN6-201ENST00000373020 TRIM49CP0CI26 452 aa13.65□□□□□ -0.22
TSPAN6-201ENST00000373020 MAPTP10636 758 aaKnown RBP13.65□□□□□ -0.22
TSPAN6-201ENST00000373020 CYP2J2P51589 502 aa13.65□□□□□ -0.22
TSPAN6-201ENST00000373020 RNASE9P60153 205 aaKnown RBP13.65□□□□□ -0.22
TSPAN6-201ENST00000373020 KIF22Q14807 665 aa13.65□□□□□ -0.22
TSPAN6-201ENST00000373020 TRADDQ15628 312 aa13.65□□□□□ -0.22
TSPAN6-201ENST00000373020 NIPA1Q7RTP0 329 aa13.65□□□□□ -0.22
TSPAN6-201ENST00000373020 C12orf56Q8IXR9 622 aa13.65□□□□□ -0.22
TSPAN6-201ENST00000373020 ARHGEF35A5YM69 484 aa13.64□□□□□ -0.23
TSPAN6-201ENST00000373020 A6NNZ2 444 aa13.64□□□□□ -0.23
TSPAN6-201ENST00000373020 EIF3HO15372 352 aaKnown RBP eCLIP13.64□□□□□ -0.23
TSPAN6-201ENST00000373020 ITGB5P18084 799 aa13.64□□□□□ -0.23
TSPAN6-201ENST00000373020 PTGER2P43116 358 aa13.64□□□□□ -0.23
TSPAN6-201ENST00000373020 ALCAMQ13740 583 aa13.64□□□□□ -0.23
TSPAN6-201ENST00000373020 TUBB8Q3ZCM7 444 aa13.64□□□□□ -0.23
TSPAN6-201ENST00000373020 GLYCTKQ8IVS8 523 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms