RNA–Protein interactions for RNA: ENST00000372998.1

LCN2-202, Transcript of lipocalin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LCN2, Length 631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-202ENST00000372998 SMTNP53814 917 aa11.81□□□□□ -0.52
LCN2-202ENST00000372998 GALCP54803 685 aa11.81□□□□□ -0.52
LCN2-202ENST00000372998 EIF6P56537 245 aaKnown RBP11.81□□□□□ -0.52
LCN2-202ENST00000372998 ICA1Q05084 483 aa11.81□□□□□ -0.52
LCN2-202ENST00000372998 ENPEPQ07075 957 aa11.81□□□□□ -0.52
LCN2-202ENST00000372998 ADCY2Q08462 1091 aa11.81□□□□□ -0.52
LCN2-202ENST00000372998 USP17L24Q0WX57 530 aa11.81□□□□□ -0.52
LCN2-202ENST00000372998 KIF22Q14807 665 aa11.81□□□□□ -0.52
LCN2-202ENST00000372998 C6orf118Q5T5N4 469 aa11.81□□□□□ -0.52
LCN2-202ENST00000372998 RBM26Q5T8P6 1007 aaKnown RBP11.81□□□□□ -0.52
LCN2-202ENST00000372998 GKAP1Q5VSY0 366 aaPredicted RBP11.81□□□□□ -0.52
LCN2-202ENST00000372998 USP17L6PQ6QN14 398 aa11.81□□□□□ -0.52
LCN2-202ENST00000372998 INTS8Q75QN2 995 aaKnown RBP11.81□□□□□ -0.52
LCN2-202ENST00000372998 C12orf56Q8IXR9 622 aa11.81□□□□□ -0.52
LCN2-202ENST00000372998 CACNA2D3Q8IZS8 1091 aa11.81□□□□□ -0.52
LCN2-202ENST00000372998 MYCT1Q8N699 235 aa11.81□□□□□ -0.52
LCN2-202ENST00000372998 SAMD3Q8N6K7 520 aa11.81□□□□□ -0.52
LCN2-202ENST00000372998 ANKS4BQ8N8V4 417 aa11.81□□□□□ -0.52
LCN2-202ENST00000372998 BORCS6Q96GS4 357 aa11.81□□□□□ -0.52
LCN2-202ENST00000372998 PSMD1Q99460 953 aa11.81□□□□□ -0.52
LCN2-202ENST00000372998 PLCD4Q9BRC7 762 aa11.81□□□□□ -0.52
LCN2-202ENST00000372998 TMEM109Q9BVC6 243 aa11.81□□□□□ -0.52
LCN2-202ENST00000372998 PACSIN1Q9BY11 444 aa11.81□□□□□ -0.52
LCN2-202ENST00000372998 WNT8AQ9H1J5 351 aa11.81□□□□□ -0.52
LCN2-202ENST00000372998 ARHGEF10LQ9HCE6 1279 aa11.81□□□□□ -0.52
LCN2-202ENST00000372998 SIX2Q9NPC8 291 aa11.81□□□□□ -0.52
LCN2-202ENST00000372998 EHD2Q9NZN4 543 aa11.81□□□□□ -0.52
LCN2-202ENST00000372998 APEX2Q9UBZ4 518 aa11.81□□□□□ -0.52
LCN2-202ENST00000372998 PNMA2Q9UL42 364 aa11.81□□□□□ -0.52
LCN2-202ENST00000372998 USP20Q9Y2K6 914 aa11.81□□□□□ -0.52
LCN2-202ENST00000372998 FRMPD4Q14CM0 1322 aa11.81□□□□□ -0.52
LCN2-202ENST00000372998 NPHP3-ACAD11A0A0J9YXS1 232 aa11.8□□□□□ -0.52
LCN2-202ENST00000372998 F5H6K3 240 aa11.8□□□□□ -0.52
LCN2-202ENST00000372998 H0YGN5 161 aa11.8□□□□□ -0.52
LCN2-202ENST00000372998 DDX3XO00571 662 aaKnown RBP eCLIP11.8□□□□□ -0.52
LCN2-202ENST00000372998 NKRFO15226 690 aaKnown RBP eCLIP11.8□□□□□ -0.52
LCN2-202ENST00000372998 TRAPPC3O43617 180 aa11.8□□□□□ -0.52
LCN2-202ENST00000372998 EVI5O60447 810 aa11.8□□□□□ -0.52
LCN2-202ENST00000372998 PLA2G6O60733 806 aa11.8□□□□□ -0.52
LCN2-202ENST00000372998 MTA2O94776 668 aa11.8□□□□□ -0.52
LCN2-202ENST00000372998 ABCD1P33897 745 aa11.8□□□□□ -0.52
LCN2-202ENST00000372998 RDXP35241 583 aaKnown RBP11.8□□□□□ -0.52
LCN2-202ENST00000372998 PDE6BP35913 854 aa11.8□□□□□ -0.52
LCN2-202ENST00000372998 SLC16A2P36021 539 aa11.8□□□□□ -0.52
LCN2-202ENST00000372998 CRKP46108 304 aa11.8□□□□□ -0.52
LCN2-202ENST00000372998 LIG3P49916 1009 aa11.8□□□□□ -0.52
LCN2-202ENST00000372998 ATP1A2P50993 1020 aa11.8□□□□□ -0.52
LCN2-202ENST00000372998 PRELPP51888 382 aa11.8□□□□□ -0.52
LCN2-202ENST00000372998 ZNF131P52739 623 aa11.8□□□□□ -0.52
LCN2-202ENST00000372998 MYL7Q01449 175 aa11.8□□□□□ -0.52
LCN2-202ENST00000372998 DR1Q01658 176 aa11.8□□□□□ -0.52
LCN2-202ENST00000372998 PPATQ06203 517 aa11.8□□□□□ -0.52
LCN2-202ENST00000372998 KLRC3Q07444 240 aa11.8□□□□□ -0.52
LCN2-202ENST00000372998 ACTN3Q08043 901 aaPredicted RBP11.8□□□□□ -0.52
LCN2-202ENST00000372998 ZNF844Q08AG5 666 aa11.8□□□□□ -0.52
LCN2-202ENST00000372998 IKQ13123 557 aaPredicted RBP11.8□□□□□ -0.52
LCN2-202ENST00000372998 ABCB5Q2M3G0 1257 aa11.8□□□□□ -0.52
LCN2-202ENST00000372998 KRT71Q3SY84 523 aa11.8□□□□□ -0.52
LCN2-202ENST00000372998 SEL1L2Q5TEA6 688 aa11.8□□□□□ -0.52
LCN2-202ENST00000372998 KCTD16Q68DU8 428 aa11.8□□□□□ -0.52
LCN2-202ENST00000372998 SMYD5Q6GMV2 418 aa11.8□□□□□ -0.52
LCN2-202ENST00000372998 RINT1Q6NUQ1 792 aa11.8□□□□□ -0.52
LCN2-202ENST00000372998 TAOK1Q7L7X3 1001 aa11.8□□□□□ -0.52
LCN2-202ENST00000372998 TMC3Q7Z5M5 1100 aa11.8□□□□□ -0.52
LCN2-202ENST00000372998 USP37Q86T82 979 aa11.8□□□□□ -0.52
LCN2-202ENST00000372998 FAM178BQ8IXR5 827 aa11.8□□□□□ -0.52
LCN2-202ENST00000372998 IPO4Q8TEX9 1081 aaKnown RBP11.8□□□□□ -0.52
LCN2-202ENST00000372998 CHURC1Q8WUH1 139 aa11.8□□□□□ -0.52
LCN2-202ENST00000372998 PGM2Q96G03 612 aa11.8□□□□□ -0.52
LCN2-202ENST00000372998 ERP44Q9BS26 406 aa11.8□□□□□ -0.52
LCN2-202ENST00000372998 ROPN1BQ9BZX4 212 aaPredicted RBP11.8□□□□□ -0.52
LCN2-202ENST00000372998 BHMT2Q9H2M3 363 aa11.8□□□□□ -0.52
LCN2-202ENST00000372998 VCPKMTQ9H867 229 aa11.8□□□□□ -0.52
LCN2-202ENST00000372998 ROPN1Q9HAT0 212 aaPredicted RBP11.8□□□□□ -0.52
LCN2-202ENST00000372998 DDX4Q9NQI0 724 aaKnown RBP11.8□□□□□ -0.52
LCN2-202ENST00000372998 DMAC2Q9NW81 257 aa11.8□□□□□ -0.52
LCN2-202ENST00000372998 SMARCAL1Q9NZC9 954 aa11.8□□□□□ -0.52
LCN2-202ENST00000372998 DNAJC12Q9UKB3 198 aa11.8□□□□□ -0.52
LCN2-202ENST00000372998 VAV3Q9UKW4 847 aa11.8□□□□□ -0.52
LCN2-202ENST00000372998 MRPL11Q9Y3B7 192 aaKnown RBP11.8□□□□□ -0.52
LCN2-202ENST00000372998 NFS1Q9Y697 457 aa11.8□□□□□ -0.52
LCN2-202ENST00000372998 CAPN7Q9Y6W3 813 aa11.8□□□□□ -0.52
LCN2-202ENST00000372998 ZNF536O15090 1300 aa11.8□□□□□ -0.52
LCN2-202ENST00000372998 SPATA31A6Q5VVP1 1343 aa11.8□□□□□ -0.52
LCN2-202ENST00000372998 MYH11P35749 1972 aa11.79□□□□□ -0.52
LCN2-202ENST00000372998 CHUKO15111 745 aa11.79□□□□□ -0.52
LCN2-202ENST00000372998 MSH4O15457 936 aa11.79□□□□□ -0.52
LCN2-202ENST00000372998 PHF2O75151 1096 aa11.79□□□□□ -0.52
LCN2-202ENST00000372998 AGTP01019 485 aa11.79□□□□□ -0.52
LCN2-202ENST00000372998 ZBTB48P10074 688 aaPredicted RBP11.79□□□□□ -0.52
LCN2-202ENST00000372998 GZMAP12544 262 aa11.79□□□□□ -0.52
LCN2-202ENST00000372998 ACTN1P12814 892 aa11.79□□□□□ -0.52
LCN2-202ENST00000372998 PLS1Q14651 629 aa11.79□□□□□ -0.52
LCN2-202ENST00000372998 DRAP1Q14919 205 aaPredicted RBP11.79□□□□□ -0.52
LCN2-202ENST00000372998 ENOX2Q16206 610 aaKnown RBP11.79□□□□□ -0.52
LCN2-202ENST00000372998 NBPF9Q3BBW0 867 aa11.79□□□□□ -0.52
LCN2-202ENST00000372998 LACTB2Q53H82 288 aaPredicted RBP11.79□□□□□ -0.52
LCN2-202ENST00000372998 RNF187Q5TA31 235 aaPredicted RBP11.79□□□□□ -0.52
LCN2-202ENST00000372998 STRIP1Q5VSL9 837 aa11.79□□□□□ -0.52
LCN2-202ENST00000372998 DENND2CQ68D51 928 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms