RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 ADKP55263 362 aaKnown RBP17.71■□□□□ 0.43
C9orf78-201ENST00000372447 UGCGQ16739 394 aa17.71■□□□□ 0.43
C9orf78-201ENST00000372447 PLPPR4Q7Z2D5 763 aa17.71■□□□□ 0.43
C9orf78-201ENST00000372447 IRF2BP1Q8IU81 584 aa17.71■□□□□ 0.43
C9orf78-201ENST00000372447 BANK1Q8NDB2 785 aa17.71■□□□□ 0.43
C9orf78-201ENST00000372447 AFAP1L1Q8TED9 768 aa17.71■□□□□ 0.43
C9orf78-201ENST00000372447 DYDC2Q96IM9 177 aa17.71■□□□□ 0.43
C9orf78-201ENST00000372447 BAG1Q99933 345 aaPredicted RBP17.71■□□□□ 0.43
C9orf78-201ENST00000372447 SMARCAD1Q9H4L7 1026 aa17.71■□□□□ 0.43
C9orf78-201ENST00000372447 TUT1Q9H6E5 874 aaKnown RBP17.71■□□□□ 0.43
C9orf78-201ENST00000372447 DNAH12Q6ZR08 3092 aa17.71■□□□□ 0.43
C9orf78-201ENST00000372447 ITIH6Q6UXX5 1313 aa17.71■□□□□ 0.43
C9orf78-201ENST00000372447 A0A1W2PQ45 241 aaPredicted RBP17.71■□□□□ 0.43
C9orf78-201ENST00000372447 A0A1W2PQY0 241 aa17.71■□□□□ 0.43
C9orf78-201ENST00000372447 AKR1B15C9JRZ8 316 aaPredicted RBP17.71■□□□□ 0.43
C9orf78-201ENST00000372447 ARHGAP6O43182 974 aa17.71■□□□□ 0.43
C9orf78-201ENST00000372447 CABYRO75952 493 aa17.71■□□□□ 0.43
C9orf78-201ENST00000372447 SLITRK3O94933 977 aa17.71■□□□□ 0.43
C9orf78-201ENST00000372447 P4HBP07237 508 aaKnown RBP17.71■□□□□ 0.43
C9orf78-201ENST00000372447 ATP4AP20648 1035 aa17.71■□□□□ 0.43
C9orf78-201ENST00000372447 SOX10P56693 466 aa17.71■□□□□ 0.43
C9orf78-201ENST00000372447 PSMC6P62333 389 aa17.71■□□□□ 0.43
C9orf78-201ENST00000372447 CYP4A11Q02928 519 aa17.71■□□□□ 0.43
C9orf78-201ENST00000372447 FAM160B1Q5W0V3 765 aa17.71■□□□□ 0.43
C9orf78-201ENST00000372447 CEP135Q66GS9 1140 aa17.71■□□□□ 0.43
C9orf78-201ENST00000372447 DYMQ7RTS9 669 aa17.71■□□□□ 0.43
C9orf78-201ENST00000372447 PPFIBP1Q86W92 1011 aa17.71■□□□□ 0.43
C9orf78-201ENST00000372447 KIAA0895Q8NCT3 520 aa17.71■□□□□ 0.43
C9orf78-201ENST00000372447 DDX12PQ92771 950 aa17.71■□□□□ 0.43
C9orf78-201ENST00000372447 P2RX5Q93086 422 aa17.71■□□□□ 0.43
C9orf78-201ENST00000372447 PPP1R13BQ96KQ4 1090 aa17.71■□□□□ 0.43
C9orf78-201ENST00000372447 GLT1D1Q96MS3 346 aa17.71■□□□□ 0.43
C9orf78-201ENST00000372447 SRRTQ9BXP5 876 aaKnown RBP17.71■□□□□ 0.43
C9orf78-201ENST00000372447 VPS16Q9H269 839 aa17.71■□□□□ 0.43
C9orf78-201ENST00000372447 RNPEPQ9H4A4 650 aa17.71■□□□□ 0.43
C9orf78-201ENST00000372447 TAB2Q9NYJ8 693 aa17.71■□□□□ 0.43
C9orf78-201ENST00000372447 WRAP73Q9P2S5 460 aaPredicted RBP17.71■□□□□ 0.43
C9orf78-201ENST00000372447 CCP110O43303 1012 aa17.7■□□□□ 0.42
C9orf78-201ENST00000372447 STX10O60499 249 aa17.7■□□□□ 0.42
C9orf78-201ENST00000372447 SPATA31C1P0DKV0 1188 aa17.7■□□□□ 0.42
C9orf78-201ENST00000372447 COL6A1P12109 1028 aa17.7■□□□□ 0.42
C9orf78-201ENST00000372447 EEF1GP26641 437 aaKnown RBP17.7■□□□□ 0.42
C9orf78-201ENST00000372447 MARK3P27448 753 aa17.7■□□□□ 0.42
C9orf78-201ENST00000372447 CHMP4BP1P59074 171 aa17.7■□□□□ 0.42
C9orf78-201ENST00000372447 CTTNQ14247 550 aaKnown RBP17.7■□□□□ 0.42
C9orf78-201ENST00000372447 CATSPER3Q86XQ3 398 aa17.7■□□□□ 0.42
C9orf78-201ENST00000372447 CREBRFQ8IUR6 639 aa17.7■□□□□ 0.42
C9orf78-201ENST00000372447 PPP1R13LQ8WUF5 828 aa17.7■□□□□ 0.42
C9orf78-201ENST00000372447 VTI1AQ96AJ9 217 aa17.7■□□□□ 0.42
C9orf78-201ENST00000372447 PAWRQ96IZ0 340 aaKnown RBP17.7■□□□□ 0.42
C9orf78-201ENST00000372447 DUSP9Q99956 384 aaKnown RBP17.7■□□□□ 0.42
C9orf78-201ENST00000372447 SENP6Q9GZR1 1112 aaPredicted RBP17.7■□□□□ 0.42
C9orf78-201ENST00000372447 ERAP1Q9NZ08 941 aa17.7■□□□□ 0.42
C9orf78-201ENST00000372447 PAXBP1Q9Y5B6 917 aa17.7■□□□□ 0.42
C9orf78-201ENST00000372447 IGSF9BQ9UPX0 1349 aa17.69■□□□□ 0.42
C9orf78-201ENST00000372447 HAS3O00219 553 aa17.69■□□□□ 0.42
C9orf78-201ENST00000372447 ZNF862O60290 1169 aa17.69■□□□□ 0.42
C9orf78-201ENST00000372447 MED24O75448 989 aa17.69■□□□□ 0.42
C9orf78-201ENST00000372447 QARSP47897 775 aaKnown RBP17.69■□□□□ 0.42
C9orf78-201ENST00000372447 PSEN2P49810 448 aa17.69■□□□□ 0.42
C9orf78-201ENST00000372447 PSMC5P62195 406 aa17.69■□□□□ 0.42
C9orf78-201ENST00000372447 RBL2Q08999 1139 aa17.69■□□□□ 0.42
C9orf78-201ENST00000372447 KIAA0753Q2KHM9 967 aa17.69■□□□□ 0.42
C9orf78-201ENST00000372447 TRMT1LQ7Z2T5 733 aaKnown RBP17.69■□□□□ 0.42
C9orf78-201ENST00000372447 TPH2Q8IWU9 490 aa17.69■□□□□ 0.42
C9orf78-201ENST00000372447 CSGALNACT2Q8N6G5 542 aa17.69■□□□□ 0.42
C9orf78-201ENST00000372447 HPS3Q969F9 1004 aa17.69■□□□□ 0.42
C9orf78-201ENST00000372447 PANX2Q96RD6 677 aa17.69■□□□□ 0.42
C9orf78-201ENST00000372447 LXNQ9BS40 222 aa17.69■□□□□ 0.42
C9orf78-201ENST00000372447 SLC39A2Q9NP94 309 aa17.69■□□□□ 0.42
C9orf78-201ENST00000372447 STARD7Q9NQZ5 370 aa17.69■□□□□ 0.42
C9orf78-201ENST00000372447 MAGEC2Q9UBF1 373 aaPredicted RBP17.69■□□□□ 0.42
C9orf78-201ENST00000372447 ZNF215Q9UL58 517 aaPredicted RBP17.69■□□□□ 0.42
C9orf78-201ENST00000372447 KIAA1024Q9UPX6 916 aa17.69■□□□□ 0.42
C9orf78-201ENST00000372447 GRIN2DO15399 1336 aa17.69■□□□□ 0.42
C9orf78-201ENST00000372447 KIF2AO00139 706 aaPredicted RBP17.68■□□□□ 0.42
C9orf78-201ENST00000372447 GTF2F1P35269 517 aaKnown RBP eCLIP17.68■□□□□ 0.42
C9orf78-201ENST00000372447 MFSD10Q14728 455 aa17.68■□□□□ 0.42
C9orf78-201ENST00000372447 NBPF20Q3BBV1 942 aa17.68■□□□□ 0.42
C9orf78-201ENST00000372447 HAUS3Q68CZ6 603 aa17.68■□□□□ 0.42
C9orf78-201ENST00000372447 ANKRD40Q6AI12 368 aa17.68■□□□□ 0.42
C9orf78-201ENST00000372447 UBE2Q1Q7Z7E8 422 aa17.68■□□□□ 0.42
C9orf78-201ENST00000372447 ERMNQ8TAM6 284 aa17.68■□□□□ 0.42
C9orf78-201ENST00000372447 POLR3CQ9BUI4 534 aaPredicted RBP17.68■□□□□ 0.42
C9orf78-201ENST00000372447 KATNAL1Q9BW62 490 aa17.68■□□□□ 0.42
C9orf78-201ENST00000372447 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.68■□□□□ 0.426e-8■■□□□ 14.3
C9orf78-201ENST00000372447 POTEB3A0JP26 581 aa17.68■□□□□ 0.42
C9orf78-201ENST00000372447 DYNC1I1O14576 645 aa17.68■□□□□ 0.42
C9orf78-201ENST00000372447 IDEP14735 1019 aa17.68■□□□□ 0.42
C9orf78-201ENST00000372447 RPA1P27694 616 aa17.68■□□□□ 0.42
C9orf78-201ENST00000372447 SLC26A2P50443 739 aa17.68■□□□□ 0.42
C9orf78-201ENST00000372447 PSMD2Q13200 908 aa17.68■□□□□ 0.42
C9orf78-201ENST00000372447 ITGA7Q13683 1181 aa17.68■□□□□ 0.42
C9orf78-201ENST00000372447 PLCB4Q15147 1175 aa17.68■□□□□ 0.42
C9orf78-201ENST00000372447 POTEBQ6S5H4 581 aa17.68■□□□□ 0.42
C9orf78-201ENST00000372447 ATP6V0A1Q93050 837 aa17.68■□□□□ 0.42
C9orf78-201ENST00000372447 ZSWIM4Q9H7M6 989 aa17.68■□□□□ 0.42
C9orf78-201ENST00000372447 STK24Q9Y6E0 443 aa17.68■□□□□ 0.42
C9orf78-201ENST00000372447 E9PMD0 336 aa17.67■□□□□ 0.42
C9orf78-201ENST00000372447 RIOK3O14730 519 aaKnown RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms