RNA–Protein interactions for RNA: ENST00000372269.7

FAM78A-202, Transcript of family with sequence similarity 78 member A, humanhuman

TSL 1 (best) BASIC

Gene FAM78A, Length 3,659 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78A-202ENST00000372269 IRF2BP2Q7Z5L9 587 aa12.99□□□□□ -0.33
FAM78A-202ENST00000372269 UBL4BQ8N7F7 174 aa12.99□□□□□ -0.33
FAM78A-202ENST00000372269 PARD3BQ8TEW8 1205 aa12.99□□□□□ -0.33
FAM78A-202ENST00000372269 NT5C3AQ9H0P0 336 aa12.99□□□□□ -0.33
FAM78A-202ENST00000372269 BAZ2AQ9UIF9 1905 aaKnown RBP12.99□□□□□ -0.33
FAM78A-202ENST00000372269 SRRM3A6NNA2 597 aaPredicted RBP12.99□□□□□ -0.33
FAM78A-202ENST00000372269 USP17L15C9J2P7 530 aa12.99□□□□□ -0.33
FAM78A-202ENST00000372269 USP17L13C9JLJ4 530 aa12.99□□□□□ -0.33
FAM78A-202ENST00000372269 USP17L11C9JVI0 530 aa12.99□□□□□ -0.33
FAM78A-202ENST00000372269 USP17L18D6R9N7 530 aa12.99□□□□□ -0.33
FAM78A-202ENST00000372269 USP17L22D6RA61 530 aa12.99□□□□□ -0.33
FAM78A-202ENST00000372269 USP17L17D6RBQ6 530 aa12.99□□□□□ -0.33
FAM78A-202ENST00000372269 USP17L19D6RCP7 530 aa12.99□□□□□ -0.33
FAM78A-202ENST00000372269 USP17L20D6RJB6 530 aa12.99□□□□□ -0.33
FAM78A-202ENST00000372269 DDX3XO00571 662 aaKnown RBP eCLIP12.99□□□□□ -0.33
FAM78A-202ENST00000372269 CREB1P16220 341 aa12.99□□□□□ -0.33
FAM78A-202ENST00000372269 MSH2P43246 934 aa12.99□□□□□ -0.33
FAM78A-202ENST00000372269 SLC8A3P57103 927 aa12.99□□□□□ -0.33
FAM78A-202ENST00000372269 USP17L24Q0WX57 530 aa12.99□□□□□ -0.33
FAM78A-202ENST00000372269 CCDC137Q6PK04 289 aaKnown RBP12.99□□□□□ -0.33
FAM78A-202ENST00000372269 USP17L6PQ6QN14 398 aa12.99□□□□□ -0.33
FAM78A-202ENST00000372269 C1orf131Q8NDD1 294 aaKnown RBP12.99□□□□□ -0.33
FAM78A-202ENST00000372269 BATF3Q9NR55 127 aa12.99□□□□□ -0.33
FAM78A-202ENST00000372269 SUCLA2Q9P2R7 463 aaPredicted RBP12.99□□□□□ -0.33
FAM78A-202ENST00000372269 MTUS1Q9ULD2 1270 aa12.99□□□□□ -0.33
FAM78A-202ENST00000372269 BCL9LQ86UU0 1499 aa12.99□□□□□ -0.33
FAM78A-202ENST00000372269 EME2A4GXA9 379 aaPredicted RBP12.99□□□□□ -0.33
FAM78A-202ENST00000372269 PALM3A6NDB9 673 aaPredicted RBP12.99□□□□□ -0.33
FAM78A-202ENST00000372269 C5orf60A6NFR6 353 aa12.99□□□□□ -0.33
FAM78A-202ENST00000372269 BRAFP15056 766 aa12.99□□□□□ -0.33
FAM78A-202ENST00000372269 GBP1P32455 592 aa12.99□□□□□ -0.33
FAM78A-202ENST00000372269 ERFP50548 548 aa12.99□□□□□ -0.33
FAM78A-202ENST00000372269 CASP5P51878 434 aa12.99□□□□□ -0.33
FAM78A-202ENST00000372269 RAD23BP54727 409 aa12.99□□□□□ -0.33
FAM78A-202ENST00000372269 COPS2P61201 443 aa12.99□□□□□ -0.33
FAM78A-202ENST00000372269 PRR16Q569H4 304 aa12.99□□□□□ -0.33
FAM78A-202ENST00000372269 UBAP2Q5T6F2 1119 aaKnown RBP12.99□□□□□ -0.33
FAM78A-202ENST00000372269 TXNRD3Q86VQ6 643 aa12.99□□□□□ -0.33
FAM78A-202ENST00000372269 SYCP3Q8IZU3 236 aa12.99□□□□□ -0.33
FAM78A-202ENST00000372269 MYH7P12883 1935 aa12.99□□□□□ -0.33
FAM78A-202ENST00000372269 CHMP2AO43633 222 aa12.98□□□□□ -0.33
FAM78A-202ENST00000372269 CALUO43852 315 aaPredicted RBP12.98□□□□□ -0.33
FAM78A-202ENST00000372269 AP1G2O75843 785 aa12.98□□□□□ -0.33
FAM78A-202ENST00000372269 RNASELQ05823 741 aaKnown RBP12.98□□□□□ -0.33
FAM78A-202ENST00000372269 DRAP1Q14919 205 aaPredicted RBP12.98□□□□□ -0.33
FAM78A-202ENST00000372269 NKX1-1Q15270 411 aaPredicted RBP12.98□□□□□ -0.33
FAM78A-202ENST00000372269 EMC10Q5UCC4 262 aa12.98□□□□□ -0.33
FAM78A-202ENST00000372269 SPATA21Q7Z572 469 aa12.98□□□□□ -0.33
FAM78A-202ENST00000372269 LMNTD2Q8IXW0 634 aa12.98□□□□□ -0.33
FAM78A-202ENST00000372269 DAGLBQ8NCG7 672 aa12.98□□□□□ -0.33
FAM78A-202ENST00000372269 RBM46Q8TBY0 533 aaKnown RBP12.98□□□□□ -0.33
FAM78A-202ENST00000372269 TGS1Q96RS0 853 aaKnown RBP12.98□□□□□ -0.33
FAM78A-202ENST00000372269 TMEM59LQ9UK28 342 aa12.98□□□□□ -0.33
FAM78A-202ENST00000372269 DNM3Q9UQ16 869 aa12.98□□□□□ -0.33
FAM78A-202ENST00000372269 ABCB11O95342 1321 aa12.98□□□□□ -0.33
FAM78A-202ENST00000372269 MYBP10242 640 aa12.98□□□□□ -0.33
FAM78A-202ENST00000372269 CDK8P49336 464 aa12.98□□□□□ -0.33
FAM78A-202ENST00000372269 RBBP5Q15291 538 aaKnown RBP12.98□□□□□ -0.33
FAM78A-202ENST00000372269 ANKRD20A2Q5SQ80 823 aa12.98□□□□□ -0.33
FAM78A-202ENST00000372269 ANKRD20A1Q5TYW2 823 aa12.98□□□□□ -0.33
FAM78A-202ENST00000372269 ANKRD20A3Q5VUR7 823 aa12.98□□□□□ -0.33
FAM78A-202ENST00000372269 LONP2Q86WA8 852 aa12.98□□□□□ -0.33
FAM78A-202ENST00000372269 THAP2Q9H0W7 228 aa12.98□□□□□ -0.33
FAM78A-202ENST00000372269 GANQ9H2C0 597 aa12.98□□□□□ -0.33
FAM78A-202ENST00000372269 IKZF4Q9H2S9 585 aa12.98□□□□□ -0.33
FAM78A-202ENST00000372269 PSTPIP2Q9H939 334 aa12.98□□□□□ -0.33
FAM78A-202ENST00000372269 CTNNAL1Q9UBT7 734 aa12.98□□□□□ -0.33
FAM78A-202ENST00000372269 DNAJC12Q9UKB3 198 aa12.98□□□□□ -0.33
FAM78A-202ENST00000372269 M0R2N6 131 aa12.98□□□□□ -0.33
FAM78A-202ENST00000372269 ASAP2O43150 1006 aa12.98□□□□□ -0.33
FAM78A-202ENST00000372269 THAP12O43422 761 aa12.98□□□□□ -0.33
FAM78A-202ENST00000372269 SNX3O60493 162 aa12.98□□□□□ -0.33
FAM78A-202ENST00000372269 AGTP01019 485 aa12.98□□□□□ -0.33
FAM78A-202ENST00000372269 TRIM49P0CI25 452 aa12.98□□□□□ -0.33
FAM78A-202ENST00000372269 TRIM49CP0CI26 452 aa12.98□□□□□ -0.33
FAM78A-202ENST00000372269 FERP16591 822 aa12.98□□□□□ -0.33
FAM78A-202ENST00000372269 CCND1P24385 295 aa12.98□□□□□ -0.33
FAM78A-202ENST00000372269 NCALDP61601 193 aa12.98□□□□□ -0.33
FAM78A-202ENST00000372269 ITIH4Q14624 930 aa12.98□□□□□ -0.33
FAM78A-202ENST00000372269 SEPT7Q16181 437 aaKnown RBP12.98□□□□□ -0.33
FAM78A-202ENST00000372269 ZNF772Q68DY9 489 aaPredicted RBP12.98□□□□□ -0.33
FAM78A-202ENST00000372269 CYP4F22Q6NT55 531 aa12.98□□□□□ -0.33
FAM78A-202ENST00000372269 PHLDB2Q86SQ0 1253 aa12.98□□□□□ -0.33
FAM78A-202ENST00000372269 LRRC57Q8N9N7 239 aa12.98□□□□□ -0.33
FAM78A-202ENST00000372269 AKAP3O75969 853 aa12.97□□□□□ -0.33
FAM78A-202ENST00000372269 ZNF131P52739 623 aa12.97□□□□□ -0.33
FAM78A-202ENST00000372269 MUM1Q2TAK8 710 aa12.97□□□□□ -0.33
FAM78A-202ENST00000372269 KCTD1Q719H9 257 aa12.97□□□□□ -0.33
FAM78A-202ENST00000372269 MYCT1Q8N699 235 aa12.97□□□□□ -0.33
FAM78A-202ENST00000372269 RFFLQ8WZ73 363 aa12.97□□□□□ -0.33
FAM78A-202ENST00000372269 DNAJC19Q96DA6 116 aa12.97□□□□□ -0.33
FAM78A-202ENST00000372269 ZNF317Q96PQ6 595 aaPredicted RBP12.97□□□□□ -0.33
FAM78A-202ENST00000372269 PITPNM3Q9BZ71 974 aa12.97□□□□□ -0.33
FAM78A-202ENST00000372269 TMX4Q9H1E5 349 aaPredicted RBP12.97□□□□□ -0.33
FAM78A-202ENST00000372269 SCN11AQ9UI33 1791 aa12.97□□□□□ -0.33
FAM78A-202ENST00000372269 LRRD1A4D1F6 860 aa12.97□□□□□ -0.33
FAM78A-202ENST00000372269 ATMINO43313 823 aaPredicted RBP12.97□□□□□ -0.33
FAM78A-202ENST00000372269 RPL21P46778 160 aaKnown RBP12.97□□□□□ -0.33
FAM78A-202ENST00000372269 MAPK7Q13164 816 aa12.97□□□□□ -0.33
FAM78A-202ENST00000372269 HP1BP3Q5SSJ5 553 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms