RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 PTPN22Q9Y2R2 807 aa12.55□□□□□ -0.4
TSPAN1-201ENST00000372003 BAZ2BQ9UIF8 2168 aaKnown RBP12.54□□□□□ -0.4
TSPAN1-201ENST00000372003 COL11A1P12107 1806 aaPredicted RBP12.54□□□□□ -0.4
TSPAN1-201ENST00000372003 DNAJC25-GNG10A0A024R161 153 aa12.54□□□□□ -0.4
TSPAN1-201ENST00000372003 TRIM49BA6NDI0 452 aa12.54□□□□□ -0.4
TSPAN1-201ENST00000372003 RCCD1A6NED2 376 aa12.54□□□□□ -0.4
TSPAN1-201ENST00000372003 B4DLN1 442 aa12.54□□□□□ -0.4
TSPAN1-201ENST00000372003 FSBPO95073 299 aa12.54□□□□□ -0.4
TSPAN1-201ENST00000372003 ELNP15502 786 aa12.54□□□□□ -0.4
TSPAN1-201ENST00000372003 ADCY7P51828 1080 aa12.54□□□□□ -0.4
TSPAN1-201ENST00000372003 MRPL12P52815 198 aaKnown RBP12.54□□□□□ -0.4
TSPAN1-201ENST00000372003 PMS1P54277 932 aaKnown RBP12.54□□□□□ -0.4
TSPAN1-201ENST00000372003 GSCP56915 257 aaPredicted RBP12.54□□□□□ -0.4
TSPAN1-201ENST00000372003 AMPD3Q01432 767 aa12.54□□□□□ -0.4
TSPAN1-201ENST00000372003 ORC2Q13416 577 aaPredicted RBP12.54□□□□□ -0.4
TSPAN1-201ENST00000372003 DRP2Q13474 957 aa12.54□□□□□ -0.4
TSPAN1-201ENST00000372003 PLCB4Q15147 1175 aa12.54□□□□□ -0.4
TSPAN1-201ENST00000372003 ZNF792Q3KQV3 632 aa12.54□□□□□ -0.4
TSPAN1-201ENST00000372003 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.54□□□□□ -0.4
TSPAN1-201ENST00000372003 IFT20Q8IY31 132 aa12.54□□□□□ -0.4
TSPAN1-201ENST00000372003 PLCD3Q8N3E9 789 aa12.54□□□□□ -0.4
TSPAN1-201ENST00000372003 TAAR1Q96RJ0 339 aa12.54□□□□□ -0.4
TSPAN1-201ENST00000372003 OSBPL9Q96SU4 736 aa12.54□□□□□ -0.4
TSPAN1-201ENST00000372003 APBA2Q99767 749 aa12.54□□□□□ -0.4
TSPAN1-201ENST00000372003 C7orf25Q9BPX7 421 aa12.54□□□□□ -0.4
TSPAN1-201ENST00000372003 C6orf50Q9HD87 102 aa12.54□□□□□ -0.4
TSPAN1-201ENST00000372003 AGPAT5Q9NUQ2 364 aa12.54□□□□□ -0.4
TSPAN1-201ENST00000372003 COL20A1Q9P218 1284 aa12.54□□□□□ -0.4
TSPAN1-201ENST00000372003 PCDHA4Q9UN74 947 aa12.54□□□□□ -0.4
TSPAN1-201ENST00000372003 PCDHA13Q9Y5I0 950 aa12.54□□□□□ -0.4
TSPAN1-201ENST00000372003 ZSWIM8A7E2V4 1837 aa12.53□□□□□ -0.4
TSPAN1-201ENST00000372003 SSU72P8A0A1W2PR75 194 aa12.53□□□□□ -0.4
TSPAN1-201ENST00000372003 GRID2IPA4D2P6 1211 aa12.53□□□□□ -0.4
TSPAN1-201ENST00000372003 SOWAHBA6NEL2 793 aa12.53□□□□□ -0.4
TSPAN1-201ENST00000372003 MEIS2O14770 477 aa12.53□□□□□ -0.4
TSPAN1-201ENST00000372003 ADAMTS3O15072 1205 aa12.53□□□□□ -0.4
TSPAN1-201ENST00000372003 ADCY3O60266 1144 aa12.53□□□□□ -0.4
TSPAN1-201ENST00000372003 UBA7P41226 1012 aa12.53□□□□□ -0.4
TSPAN1-201ENST00000372003 HSD17B4P51659 736 aa12.53□□□□□ -0.4
TSPAN1-201ENST00000372003 PRMT2P55345 433 aa12.53□□□□□ -0.4
TSPAN1-201ENST00000372003 SETQ01105 290 aaPredicted RBP12.53□□□□□ -0.4
TSPAN1-201ENST00000372003 PAK2Q13177 524 aa12.53□□□□□ -0.4
TSPAN1-201ENST00000372003 MAPK8IP2Q13387 824 aaPredicted RBP12.53□□□□□ -0.4
TSPAN1-201ENST00000372003 CCDC181Q5TID7 509 aa12.53□□□□□ -0.4
TSPAN1-201ENST00000372003 PPP1R18Q6NYC8 613 aa12.53□□□□□ -0.4
TSPAN1-201ENST00000372003 FAM133AQ8N9E0 248 aa12.53□□□□□ -0.4
TSPAN1-201ENST00000372003 MAML3Q96JK9 1138 aa12.53□□□□□ -0.4
TSPAN1-201ENST00000372003 ZFP91Q96JP5 570 aaPredicted RBP12.53□□□□□ -0.4
TSPAN1-201ENST00000372003 LRRC1Q9BTT6 524 aa12.53□□□□□ -0.4
TSPAN1-201ENST00000372003 NOC4LQ9BVI4 516 aaKnown RBP12.53□□□□□ -0.4
TSPAN1-201ENST00000372003 IFIH1Q9BYX4 1025 aaKnown RBP12.53□□□□□ -0.4
TSPAN1-201ENST00000372003 NUCKS1Q9H1E3 243 aaKnown RBP12.53□□□□□ -0.4
TSPAN1-201ENST00000372003 RIC8AQ9NPQ8 531 aa12.53□□□□□ -0.4
TSPAN1-201ENST00000372003 GDF3Q9NR23 364 aa12.53□□□□□ -0.4
TSPAN1-201ENST00000372003 RNF216Q9NWF9 866 aaPredicted RBP12.53□□□□□ -0.4
TSPAN1-201ENST00000372003 TMEM260Q9NX78 707 aa12.53□□□□□ -0.4
TSPAN1-201ENST00000372003 FLRT1Q9NZU1 646 aa12.53□□□□□ -0.4
TSPAN1-201ENST00000372003 BIN2Q9UBW5 565 aaPredicted RBP12.53□□□□□ -0.4
TSPAN1-201ENST00000372003 M0R2N6 131 aa12.52□□□□□ -0.4
TSPAN1-201ENST00000372003 ZNF185O15231 689 aa12.52□□□□□ -0.4
TSPAN1-201ENST00000372003 KIAA0754O94854 1291 aa12.52□□□□□ -0.4
TSPAN1-201ENST00000372003 HOXC6P09630 235 aa12.52□□□□□ -0.4
TSPAN1-201ENST00000372003 XRCC5P13010 732 aaKnown RBP12.52□□□□□ -0.4
TSPAN1-201ENST00000372003 GNA11P29992 359 aa12.52□□□□□ -0.4
TSPAN1-201ENST00000372003 HNRNPH1P31943 449 aaKnown RBP12.52□□□□□ -0.4
TSPAN1-201ENST00000372003 MTIF2P46199 727 aaKnown RBP12.52□□□□□ -0.4
TSPAN1-201ENST00000372003 UBXN2AP68543 259 aa12.52□□□□□ -0.4
TSPAN1-201ENST00000372003 IRF5Q13568 498 aa12.52□□□□□ -0.4
TSPAN1-201ENST00000372003 MIIPQ5JXC2 388 aa12.52□□□□□ -0.4
TSPAN1-201ENST00000372003 ARHGEF16Q5VV41 709 aa12.52□□□□□ -0.4
TSPAN1-201ENST00000372003 HAUS3Q68CZ6 603 aa12.52□□□□□ -0.4
TSPAN1-201ENST00000372003 CNNM4Q6P4Q7 775 aa12.52□□□□□ -0.4
TSPAN1-201ENST00000372003 CNOT6LQ96LI5 555 aaKnown RBP12.52□□□□□ -0.4
TSPAN1-201ENST00000372003 RMDN3Q96TC7 470 aa12.52□□□□□ -0.4
TSPAN1-201ENST00000372003 ZMYND12Q9H0C1 365 aa12.52□□□□□ -0.4
TSPAN1-201ENST00000372003 LUC7LQ9NQ29 371 aaKnown RBP12.52□□□□□ -0.4
TSPAN1-201ENST00000372003 MACROD2A1Z1Q3 448 aa12.51□□□□□ -0.41
TSPAN1-201ENST00000372003 RBAK-RBAKDNI3L0D1 243 aa12.51□□□□□ -0.41
TSPAN1-201ENST00000372003 PES1O00541 588 aaKnown RBP12.51□□□□□ -0.41
TSPAN1-201ENST00000372003 MEFVO15553 781 aaPredicted RBP12.51□□□□□ -0.41
TSPAN1-201ENST00000372003 ZMYND10O75800 440 aa12.51□□□□□ -0.41
TSPAN1-201ENST00000372003 MYCP01106 439 aaPredicted RBP12.51□□□□□ -0.41
TSPAN1-201ENST00000372003 EIF2AK2P19525 551 aaKnown RBP12.51□□□□□ -0.41
TSPAN1-201ENST00000372003 KIF11P52732 1056 aa12.51□□□□□ -0.41
TSPAN1-201ENST00000372003 CFAP221Q4G0U5 840 aa12.51□□□□□ -0.41
TSPAN1-201ENST00000372003 C8orf74Q6P047 294 aa12.51□□□□□ -0.41
TSPAN1-201ENST00000372003 FBXO46Q6PJ61 603 aaPredicted RBP12.51□□□□□ -0.41
TSPAN1-201ENST00000372003 IQCKQ8N0W5 287 aa12.51□□□□□ -0.41
TSPAN1-201ENST00000372003 RASGRP4Q8TDF6 673 aa12.51□□□□□ -0.41
TSPAN1-201ENST00000372003 SH3TC2Q8TF17 1288 aa12.51□□□□□ -0.41
TSPAN1-201ENST00000372003 WHAMMQ8TF30 809 aa12.51□□□□□ -0.41
TSPAN1-201ENST00000372003 TRIB2Q92519 343 aa12.51□□□□□ -0.41
TSPAN1-201ENST00000372003 SYN2Q92777 582 aaPredicted RBP12.51□□□□□ -0.41
TSPAN1-201ENST00000372003 FGD4Q96M96 766 aa12.51□□□□□ -0.41
TSPAN1-201ENST00000372003 MAP3K20Q9NYL2 800 aaKnown RBP12.51□□□□□ -0.41
TSPAN1-201ENST00000372003 LRWD1Q9UFC0 647 aa12.51□□□□□ -0.41
TSPAN1-201ENST00000372003 DMGDHQ9UI17 866 aaKnown RBP12.51□□□□□ -0.41
TSPAN1-201ENST00000372003 MAPK8IP1Q9UQF2 711 aa12.51□□□□□ -0.41
TSPAN1-201ENST00000372003 DIS3Q9Y2L1 958 aaKnown RBP12.51□□□□□ -0.41
TSPAN1-201ENST00000372003 CASP8AP2Q9UKL3 1982 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms