RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 TMEM199Q8N511 208 aa7.74□□□□□ -1.17
USP1-202ENST00000371146 PAF1Q8N7H5 531 aa7.74□□□□□ -1.17
USP1-202ENST00000371146 REPS2Q8NFH8 660 aa7.74□□□□□ -1.17
USP1-202ENST00000371146 LMBR1Q8WVP7 490 aa7.74□□□□□ -1.17
USP1-202ENST00000371146 POMGNT1Q8WZA1 660 aa7.74□□□□□ -1.17
USP1-202ENST00000371146 PHF20Q9BVI0 1012 aa7.74□□□□□ -1.17
USP1-202ENST00000371146 KATNAL1Q9BW62 490 aa7.74□□□□□ -1.17
USP1-202ENST00000371146 KCNH3Q9ULD8 1083 aa7.74□□□□□ -1.17
USP1-202ENST00000371146 CIZ1Q9ULV3 898 aaPredicted RBP7.74□□□□□ -1.17
USP1-202ENST00000371146 CDY2AQ9Y6F7 541 aa7.74□□□□□ -1.17
USP1-202ENST00000371146 LAMB2P55268 1798 aa7.74□□□□□ -1.17
USP1-202ENST00000371146 TBKBP1A7MCY6 615 aa7.74□□□□□ -1.17
USP1-202ENST00000371146 B4GALT4O60513 344 aa7.74□□□□□ -1.17
USP1-202ENST00000371146 IPO7O95373 1038 aaKnown RBP7.74□□□□□ -1.17
USP1-202ENST00000371146 SPATA31D3P0C874 917 aa7.74□□□□□ -1.17
USP1-202ENST00000371146 ZNF865P0CJ78 1059 aaPredicted RBP7.74□□□□□ -1.17
USP1-202ENST00000371146 BFSP2Q13515 415 aa7.74□□□□□ -1.17
USP1-202ENST00000371146 TSGA10IPQ3SY00 556 aa7.74□□□□□ -1.17
USP1-202ENST00000371146 MORN1Q5T089 497 aa7.74□□□□□ -1.17
USP1-202ENST00000371146 ZNF618Q5T7W0 954 aa7.74□□□□□ -1.17
USP1-202ENST00000371146 PCNX4Q63HM2 1172 aa7.74□□□□□ -1.17
USP1-202ENST00000371146 SPATA31D4Q6ZUB0 917 aa7.74□□□□□ -1.17
USP1-202ENST00000371146 TMC7Q7Z402 723 aa7.74□□□□□ -1.17
USP1-202ENST00000371146 PAXBP1Q9Y5B6 917 aa7.74□□□□□ -1.17
USP1-202ENST00000371146 RPS6KL1Q9Y6S9 549 aa7.74□□□□□ -1.17
USP1-202ENST00000371146 LTBP1Q14766 1721 aa7.73□□□□□ -1.17
USP1-202ENST00000371146 NMT1P30419 496 aaKnown RBP7.73□□□□□ -1.17
USP1-202ENST00000371146 GJA8P48165 433 aa7.73□□□□□ -1.17
USP1-202ENST00000371146 PRMT2P55345 433 aa7.73□□□□□ -1.17
USP1-202ENST00000371146 ST3GAL1Q11201 340 aa7.73□□□□□ -1.17
USP1-202ENST00000371146 DMP1Q13316 513 aaPredicted RBP7.73□□□□□ -1.17
USP1-202ENST00000371146 ZFYVE27Q5T4F4 411 aa7.73□□□□□ -1.17
USP1-202ENST00000371146 SAAL1Q96ER3 474 aa7.73□□□□□ -1.17
USP1-202ENST00000371146 ZSCAN16Q9H4T2 348 aaPredicted RBP7.73□□□□□ -1.17
USP1-202ENST00000371146 ELP1O95163 1332 aa7.73□□□□□ -1.17
USP1-202ENST00000371146 FGRP09769 529 aa7.73□□□□□ -1.17
USP1-202ENST00000371146 PLA2G4BP0C869 781 aa7.73□□□□□ -1.17
USP1-202ENST00000371146 ACOT2P49753 483 aa7.73□□□□□ -1.17
USP1-202ENST00000371146 ARID5AQ03989 594 aa7.73□□□□□ -1.17
USP1-202ENST00000371146 CCDC40Q4G0X9 1142 aa7.73□□□□□ -1.17
USP1-202ENST00000371146 ZC2HC1CQ53FD0 456 aaPredicted RBP7.73□□□□□ -1.17
USP1-202ENST00000371146 NACC1Q96RE7 527 aa7.73□□□□□ -1.17
USP1-202ENST00000371146 ALDH8A1Q9H2A2 487 aaPredicted RBP7.73□□□□□ -1.17
USP1-202ENST00000371146 HOOK1Q9UJC3 728 aaKnown RBP7.73□□□□□ -1.17
USP1-202ENST00000371146 PCDHA7Q9UN72 937 aa7.73□□□□□ -1.17
USP1-202ENST00000371146 MED24O75448 989 aa7.73□□□□□ -1.17
USP1-202ENST00000371146 XRCC5P13010 732 aaKnown RBP7.73□□□□□ -1.17
USP1-202ENST00000371146 CYBAP13498 195 aa7.73□□□□□ -1.17
USP1-202ENST00000371146 SREBF1P36956 1147 aa7.73□□□□□ -1.17
USP1-202ENST00000371146 MAGEA10P43363 369 aaPredicted RBP7.73□□□□□ -1.17
USP1-202ENST00000371146 GATMP50440 423 aa7.73□□□□□ -1.17
USP1-202ENST00000371146 LLGL2Q6P1M3 1020 aa7.73□□□□□ -1.17
USP1-202ENST00000371146 SLC39A5Q6ZMH5 540 aa7.73□□□□□ -1.17
USP1-202ENST00000371146 BRAPQ7Z569 592 aa7.73□□□□□ -1.17
USP1-202ENST00000371146 CATSPER3Q86XQ3 398 aa7.73□□□□□ -1.17
USP1-202ENST00000371146 TRMT44Q8IYL2 757 aaKnown RBP7.73□□□□□ -1.17
USP1-202ENST00000371146 NME8Q8N427 588 aa7.73□□□□□ -1.17
USP1-202ENST00000371146 IQUBQ8NA54 791 aa7.73□□□□□ -1.17
USP1-202ENST00000371146 GIMAP8Q8ND71 665 aaPredicted RBP7.73□□□□□ -1.17
USP1-202ENST00000371146 CPLX3Q8WVH0 158 aa7.73□□□□□ -1.17
USP1-202ENST00000371146 ERLEC1Q96DZ1 483 aa7.73□□□□□ -1.17
USP1-202ENST00000371146 MTRQ99707 1265 aa7.73□□□□□ -1.17
USP1-202ENST00000371146 TARS2Q9BW92 718 aaKnown RBP7.73□□□□□ -1.17
USP1-202ENST00000371146 SCAND2PQ9GZW5 306 aaPredicted RBP7.73□□□□□ -1.17
USP1-202ENST00000371146 IKZF4Q9H2S9 585 aa7.73□□□□□ -1.17
USP1-202ENST00000371146 LARSQ9P2J5 1176 aaKnown RBP7.73□□□□□ -1.17
USP1-202ENST00000371146 TIMM13Q9Y5L4 95 aaPredicted RBP7.73□□□□□ -1.17
USP1-202ENST00000371146 CACNA1HO95180 2353 aa7.72□□□□□ -1.17
USP1-202ENST00000371146 ASTN1O14525 1302 aa7.72□□□□□ -1.17
USP1-202ENST00000371146 ANKRD33BA6NCL7 494 aa7.72□□□□□ -1.17
USP1-202ENST00000371146 UNCXA6NJT0 531 aa7.72□□□□□ -1.17
USP1-202ENST00000371146 I3L4J1 428 aa7.72□□□□□ -1.17
USP1-202ENST00000371146 HBP1O60381 514 aa7.72□□□□□ -1.17
USP1-202ENST00000371146 EXOC3O60645 756 aa7.72□□□□□ -1.17
USP1-202ENST00000371146 DKC1O60832 514 aaKnown RBP eCLIP7.72□□□□□ -1.17
USP1-202ENST00000371146 OATP04181 439 aa7.72□□□□□ -1.17
USP1-202ENST00000371146 SLFN14P0C7P3 912 aa7.72□□□□□ -1.17
USP1-202ENST00000371146 ACTN1P12814 892 aa7.72□□□□□ -1.17
USP1-202ENST00000371146 PNOCQ13519 176 aa7.72□□□□□ -1.17
USP1-202ENST00000371146 AMHR2Q16671 573 aa7.72□□□□□ -1.17
USP1-202ENST00000371146 C9orf50Q5SZB4 431 aa7.72□□□□□ -1.17
USP1-202ENST00000371146 TAPT1Q6NXT6 567 aa7.72□□□□□ -1.17
USP1-202ENST00000371146 KCNV1Q6PIU1 500 aa7.72□□□□□ -1.17
USP1-202ENST00000371146 MYRIPQ8NFW9 859 aa7.72□□□□□ -1.17
USP1-202ENST00000371146 FNBP1Q96RU3 617 aa7.72□□□□□ -1.17
USP1-202ENST00000371146 GPR20Q99678 358 aa7.72□□□□□ -1.17
USP1-202ENST00000371146 GCOM2Q9BZD3 368 aaPredicted RBP7.72□□□□□ -1.17
USP1-202ENST00000371146 FOXP1Q9H334 677 aaPredicted RBP7.72□□□□□ -1.17
USP1-202ENST00000371146 NXF1Q9UBU9 619 aaKnown RBP7.72□□□□□ -1.17
USP1-202ENST00000371146 VCANP13611 3396 aa7.72□□□□□ -1.17
USP1-202ENST00000371146 MYH1P12882 1939 aa7.72□□□□□ -1.17
USP1-202ENST00000371146 CASTOR2A6NHX0 329 aa7.72□□□□□ -1.17
USP1-202ENST00000371146 ARVCFO00192 962 aa7.72□□□□□ -1.17
USP1-202ENST00000371146 RGS20O76081 388 aa7.72□□□□□ -1.17
USP1-202ENST00000371146 GNRH1P01148 92 aa7.72□□□□□ -1.17
USP1-202ENST00000371146 USP11P51784 963 aa7.72□□□□□ -1.17
USP1-202ENST00000371146 GSCP56915 257 aaPredicted RBP7.72□□□□□ -1.17
USP1-202ENST00000371146 IKBKEQ14164 716 aa7.72□□□□□ -1.17
USP1-202ENST00000371146 ZRSR2Q15696 482 aaKnown RBP7.72□□□□□ -1.17
USP1-202ENST00000371146 MAPK6Q16659 721 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms