RNA–Protein interactions for RNA: ENST00000370656.5

RPF1-202, Transcript of ribosome production factor 1 homolog, humanhuman

TSL 2 BASIC

Gene RPF1, Length 724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-202ENST00000370656 PDXDC2PQ6P474 469 aa17.06■□□□□ 0.32
RPF1-202ENST00000370656 CKAP2LQ8IYA6 745 aa17.06■□□□□ 0.32
RPF1-202ENST00000370656 UBALD2Q8IYN6 164 aa17.06■□□□□ 0.32
RPF1-202ENST00000370656 ABI1Q8IZP0 508 aa17.06■□□□□ 0.32
RPF1-202ENST00000370656 TMEM40Q8WWA1 233 aa17.06■□□□□ 0.32
RPF1-202ENST00000370656 CASP10Q92851 521 aa17.06■□□□□ 0.32
RPF1-202ENST00000370656 NECTIN4Q96NY8 510 aa17.06■□□□□ 0.32
RPF1-202ENST00000370656 ANO3Q9BYT9 981 aa17.06■□□□□ 0.32
RPF1-202ENST00000370656 GLT8D2Q9H1C3 349 aa17.06■□□□□ 0.32
RPF1-202ENST00000370656 CWH43Q9H720 699 aa17.06■□□□□ 0.32
RPF1-202ENST00000370656 CDHR5Q9HBB8 845 aa17.06■□□□□ 0.32
RPF1-202ENST00000370656 RIC8AQ9NPQ8 531 aa17.06■□□□□ 0.32
RPF1-202ENST00000370656 ZNF302Q9NR11 478 aa17.06■□□□□ 0.32
RPF1-202ENST00000370656 PTPRZ1P23471 2315 aaPredicted RBP17.05■□□□□ 0.32
RPF1-202ENST00000370656 MEIS1O00470 390 aa17.05■□□□□ 0.32
RPF1-202ENST00000370656 LARGE1O95461 756 aa17.05■□□□□ 0.32
RPF1-202ENST00000370656 FGFR1P11362 822 aa17.05■□□□□ 0.32
RPF1-202ENST00000370656 ADCY7P51828 1080 aa17.05■□□□□ 0.32
RPF1-202ENST00000370656 FAM189BP81408 668 aa17.05■□□□□ 0.32
RPF1-202ENST00000370656 FOXK2Q01167 660 aa17.05■□□□□ 0.32
RPF1-202ENST00000370656 APOBRQ0VD83 1088 aa17.05■□□□□ 0.32
RPF1-202ENST00000370656 ST3GAL1Q11201 340 aa17.05■□□□□ 0.32
RPF1-202ENST00000370656 MTMR3Q13615 1198 aa17.05■□□□□ 0.32
RPF1-202ENST00000370656 BMS1Q14692 1282 aaKnown RBP17.05■□□□□ 0.32
RPF1-202ENST00000370656 KIZQ2M2Z5 673 aa17.05■□□□□ 0.32
RPF1-202ENST00000370656 SYCE2Q6PIF2 218 aa17.05■□□□□ 0.32
RPF1-202ENST00000370656 ABHD15Q6UXT9 468 aa17.05■□□□□ 0.32
RPF1-202ENST00000370656 NIPA1Q7RTP0 329 aa17.05■□□□□ 0.32
RPF1-202ENST00000370656 TMC7Q7Z402 723 aa17.05■□□□□ 0.32
RPF1-202ENST00000370656 TCEANC2Q96MN5 208 aa17.05■□□□□ 0.32
RPF1-202ENST00000370656 ZNF558Q96NG5 402 aa17.05■□□□□ 0.32
RPF1-202ENST00000370656 OSMRQ99650 979 aa17.05■□□□□ 0.32
RPF1-202ENST00000370656 APOL5Q9BWW9 433 aa17.05■□□□□ 0.32
RPF1-202ENST00000370656 MYO15AQ9UKN7 3530 aa17.05■□□□□ 0.32
RPF1-202ENST00000370656 H0Y858 1186 aa17.04■□□□□ 0.32
RPF1-202ENST00000370656 DDX39AO00148 427 aaKnown RBP17.04■□□□□ 0.32
RPF1-202ENST00000370656 PFKFB2O60825 505 aa17.04■□□□□ 0.32
RPF1-202ENST00000370656 HSP90AA1P07900 732 aaKnown RBP17.04■□□□□ 0.32
RPF1-202ENST00000370656 ZSCAN20P17040 1043 aaPredicted RBP17.04■□□□□ 0.32
RPF1-202ENST00000370656 SP100P23497 879 aaPredicted RBP17.04■□□□□ 0.32
RPF1-202ENST00000370656 ITIH3Q06033 890 aa17.04■□□□□ 0.32
RPF1-202ENST00000370656 AP3B2Q13367 1082 aa17.04■□□□□ 0.32
RPF1-202ENST00000370656 WWC2Q6AWC2 1192 aa17.04■□□□□ 0.32
RPF1-202ENST00000370656 KCNT2Q6UVM3 1135 aa17.04■□□□□ 0.32
RPF1-202ENST00000370656 SGMS1Q86VZ5 419 aa17.04■□□□□ 0.32
RPF1-202ENST00000370656 FAM228AQ86W67 206 aa17.04■□□□□ 0.32
RPF1-202ENST00000370656 MICU3Q86XE3 530 aa17.04■□□□□ 0.32
RPF1-202ENST00000370656 RAB11FIP4Q86YS3 637 aa17.04■□□□□ 0.32
RPF1-202ENST00000370656 ZNF710Q8N1W2 664 aa17.04■□□□□ 0.32
RPF1-202ENST00000370656 LRRC43Q8N309 656 aa17.04■□□□□ 0.32
RPF1-202ENST00000370656 METTL13Q8N6R0 699 aa17.04■□□□□ 0.32
RPF1-202ENST00000370656 KREMEN2Q8NCW0 462 aa17.04■□□□□ 0.32
RPF1-202ENST00000370656 SLKQ9H2G2 1235 aaPredicted RBP17.04■□□□□ 0.32
RPF1-202ENST00000370656 RBM28Q9NW13 759 aaKnown RBP17.04■□□□□ 0.32
RPF1-202ENST00000370656 HCSTQ9UBK5 93 aa17.04■□□□□ 0.32
RPF1-202ENST00000370656 TCEAL9Q9UHQ7 104 aa17.04■□□□□ 0.32
RPF1-202ENST00000370656 CEP131Q9UPN4 1083 aa17.04■□□□□ 0.32
RPF1-202ENST00000370656 SORCS3Q9UPU3 1222 aa17.04■□□□□ 0.32
RPF1-202ENST00000370656 WDR87Q6ZQQ6 2873 aa17.04■□□□□ 0.32
RPF1-202ENST00000370656 RIF1Q5UIP0 2472 aaKnown RBP17.03■□□□□ 0.32
RPF1-202ENST00000370656 HIDE1A8MVS5 230 aa17.03■□□□□ 0.32
RPF1-202ENST00000370656 hCG_1984214I3L0E3 225 aa17.03■□□□□ 0.32
RPF1-202ENST00000370656 GALR2O43603 387 aaPredicted RBP17.03■□□□□ 0.32
RPF1-202ENST00000370656 CCNE2O96020 404 aa17.03■□□□□ 0.32
RPF1-202ENST00000370656 SREBF1P36956 1147 aa17.03■□□□□ 0.32
RPF1-202ENST00000370656 SMC1AQ14683 1233 aaKnown RBP17.03■□□□□ 0.32
RPF1-202ENST00000370656 SWSAP1Q6NVH7 229 aa17.03■□□□□ 0.32
RPF1-202ENST00000370656 CCDC60Q8IWA6 550 aaPredicted RBP17.03■□□□□ 0.32
RPF1-202ENST00000370656 ZNF713Q8N859 430 aaPredicted RBP17.03■□□□□ 0.32
RPF1-202ENST00000370656 SPRYD3Q8NCJ5 442 aa17.03■□□□□ 0.32
RPF1-202ENST00000370656 BBXQ8WY36 941 aaPredicted RBP17.03■□□□□ 0.32
RPF1-202ENST00000370656 BRF1Q92994 677 aa17.03■□□□□ 0.32
RPF1-202ENST00000370656 PGBD1Q96JS3 809 aa17.03■□□□□ 0.32
RPF1-202ENST00000370656 PPP1R16BQ96T49 567 aa17.03■□□□□ 0.32
RPF1-202ENST00000370656 SPG21Q9NZD8 308 aa17.03■□□□□ 0.32
RPF1-202ENST00000370656 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.03■□□□□ 0.32
RPF1-202ENST00000370656 VPS13AQ96RL7 3174 aa17.03■□□□□ 0.32
RPF1-202ENST00000370656 PROB1E7EW31 1015 aa17.02■□□□□ 0.32
RPF1-202ENST00000370656 C22orf31O95567 290 aa17.02■□□□□ 0.32
RPF1-202ENST00000370656 VTNP04004 478 aa17.02■□□□□ 0.32
RPF1-202ENST00000370656 TMOD1P28289 359 aa17.02■□□□□ 0.32
RPF1-202ENST00000370656 MTHFRP42898 656 aa17.02■□□□□ 0.32
RPF1-202ENST00000370656 DSC3Q14574 896 aa17.02■□□□□ 0.32
RPF1-202ENST00000370656 PLA2G4DQ86XP0 818 aa17.02■□□□□ 0.32
RPF1-202ENST00000370656 TMEM87AQ8NBN3 555 aa17.02■□□□□ 0.32
RPF1-202ENST00000370656 GTF3C6Q969F1 213 aa17.02■□□□□ 0.32
RPF1-202ENST00000370656 CASD1Q96PB1 797 aa17.02■□□□□ 0.32
RPF1-202ENST00000370656 MAP7D2Q96T17 732 aa17.02■□□□□ 0.32
RPF1-202ENST00000370656 ADAM7Q9H2U9 754 aa17.02■□□□□ 0.32
RPF1-202ENST00000370656 WDR81Q562E7 1941 aa17.02■□□□□ 0.31
RPF1-202ENST00000370656 SMCO2A6NFE2 343 aa17.01■□□□□ 0.31
RPF1-202ENST00000370656 ZBTB42B2RXF5 422 aa17.01■□□□□ 0.31
RPF1-202ENST00000370656 IPO5O00410 1097 aaKnown RBP17.01■□□□□ 0.31
RPF1-202ENST00000370656 MAGEB2O15479 319 aa17.01■□□□□ 0.31
RPF1-202ENST00000370656 GPR32O75388 356 aa17.01■□□□□ 0.31
RPF1-202ENST00000370656 PDGFBP01127 241 aaPredicted RBP17.01■□□□□ 0.31
RPF1-202ENST00000370656 PDIA4P13667 645 aaKnown RBP17.01■□□□□ 0.31
RPF1-202ENST00000370656 PDIA3P30101 505 aaKnown RBP17.01■□□□□ 0.31
RPF1-202ENST00000370656 NUCB2P80303 420 aa17.01■□□□□ 0.31
RPF1-202ENST00000370656 MRPL43Q8N983 215 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms