RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.34■□□□□ 0.53
PTP4A1-201ENST00000370651 INO80B-WBP1J3KQ70 363 aa18.34■□□□□ 0.53
PTP4A1-201ENST00000370651 LSP1P33241 339 aa18.34■□□□□ 0.53
PTP4A1-201ENST00000370651 KPNA2P52292 529 aaKnown RBP18.34■□□□□ 0.53
PTP4A1-201ENST00000370651 SCARF1Q14162 830 aa18.34■□□□□ 0.53
PTP4A1-201ENST00000370651 KLHL38Q2WGJ6 581 aa18.34■□□□□ 0.53
PTP4A1-201ENST00000370651 ERICH1Q86X53 443 aa18.34■□□□□ 0.53
PTP4A1-201ENST00000370651 INO80BQ9C086 356 aaPredicted RBP18.34■□□□□ 0.53
PTP4A1-201ENST00000370651 AGPAT5Q9NUQ2 364 aa18.34■□□□□ 0.53
PTP4A1-201ENST00000370651 LOC102724159A0A0B4J2E5 919 aa18.33■□□□□ 0.53
PTP4A1-201ENST00000370651 PFDN6O15212 129 aa18.33■□□□□ 0.53
PTP4A1-201ENST00000370651 TLR3O15455 904 aaKnown RBP18.33■□□□□ 0.53
PTP4A1-201ENST00000370651 H2AFXP16104 143 aaPredicted RBP18.33■□□□□ 0.53
PTP4A1-201ENST00000370651 PEX3P56589 373 aa18.33■□□□□ 0.53
PTP4A1-201ENST00000370651 PWP2Q15269 919 aaKnown RBP18.33■□□□□ 0.53
PTP4A1-201ENST00000370651 RNPC3Q96LT9 517 aaKnown RBP18.33■□□□□ 0.53
PTP4A1-201ENST00000370651 CCDC138Q96M89 665 aa18.33■□□□□ 0.53
PTP4A1-201ENST00000370651 TRIM9Q9C026 710 aa18.33■□□□□ 0.53
PTP4A1-201ENST00000370651 ZWILCHQ9H900 591 aa18.33■□□□□ 0.53
PTP4A1-201ENST00000370651 SSU72P8A0A1W2PR75 194 aa18.33■□□□□ 0.53
PTP4A1-201ENST00000370651 M0QZ92 97 aa18.33■□□□□ 0.53
PTP4A1-201ENST00000370651 CYP27B1O15528 508 aa18.33■□□□□ 0.53
PTP4A1-201ENST00000370651 GYPCP04921 128 aa18.33■□□□□ 0.53
PTP4A1-201ENST00000370651 ARFIP2P53365 341 aa18.33■□□□□ 0.53
PTP4A1-201ENST00000370651 CORO7P57737 925 aa18.33■□□□□ 0.53
PTP4A1-201ENST00000370651 RAB44Q7Z6P3 723 aaPredicted RBP18.33■□□□□ 0.53
PTP4A1-201ENST00000370651 REXO1L1PQ8IX06 675 aa18.33■□□□□ 0.53
PTP4A1-201ENST00000370651 TRIM56Q9BRZ2 755 aaKnown RBP18.33■□□□□ 0.53
PTP4A1-201ENST00000370651 NUP85Q9BW27 656 aa18.33■□□□□ 0.53
PTP4A1-201ENST00000370651 APOBEC2Q9Y235 224 aaKnown RBP18.33■□□□□ 0.53
PTP4A1-201ENST00000370651 ZBTB5O15062 677 aa18.33■□□□□ 0.52
PTP4A1-201ENST00000370651 KRT38O76015 456 aa18.33■□□□□ 0.52
PTP4A1-201ENST00000370651 MORC4Q8TE76 937 aa18.33■□□□□ 0.52
PTP4A1-201ENST00000370651 PIGBQ92521 554 aa18.33■□□□□ 0.52
PTP4A1-201ENST00000370651 PAGR1Q9BTK6 254 aa18.33■□□□□ 0.52
PTP4A1-201ENST00000370651 SLC38A10Q9HBR0 1119 aa18.33■□□□□ 0.52
PTP4A1-201ENST00000370651 TTC7AQ9ULT0 858 aaPredicted RBP18.33■□□□□ 0.52
PTP4A1-201ENST00000370651 WDR46O15213 610 aaKnown RBP18.33■□□□□ 0.52
PTP4A1-201ENST00000370651 CREB3O43889 395 aa18.33■□□□□ 0.52
PTP4A1-201ENST00000370651 PRDX5P30044 214 aa18.33■□□□□ 0.52
PTP4A1-201ENST00000370651 IFRD2Q12894 506 aaPredicted RBP18.33■□□□□ 0.52
PTP4A1-201ENST00000370651 SLC18A3Q16572 532 aa18.33■□□□□ 0.52
PTP4A1-201ENST00000370651 SH3RF3Q8TEJ3 882 aaPredicted RBP18.33■□□□□ 0.52
PTP4A1-201ENST00000370651 CCSER1Q9C0I3 900 aa18.33■□□□□ 0.52
PTP4A1-201ENST00000370651 FIS1Q9Y3D6 152 aa18.33■□□□□ 0.52
PTP4A1-201ENST00000370651 MROH7-TTC4A0A0A0MT08 1334 aa18.33■□□□□ 0.52
PTP4A1-201ENST00000370651 EIF4E1BA6NMX2 242 aaKnown RBP18.32■□□□□ 0.52
PTP4A1-201ENST00000370651 PSMA2P25787 234 aa18.32■□□□□ 0.52
PTP4A1-201ENST00000370651 HSPA9P38646 679 aaKnown RBP18.32■□□□□ 0.52
PTP4A1-201ENST00000370651 TMC4Q7Z404 712 aa18.32■□□□□ 0.52
PTP4A1-201ENST00000370651 FAF2Q96CS3 445 aa18.32■□□□□ 0.52
PTP4A1-201ENST00000370651 WNT8AQ9H1J5 351 aa18.32■□□□□ 0.52
PTP4A1-201ENST00000370651 TMEM260Q9NX78 707 aa18.32■□□□□ 0.52
PTP4A1-201ENST00000370651 PFASO15067 1338 aa18.32■□□□□ 0.52
PTP4A1-201ENST00000370651 ABCC3O15438 1527 aa18.32■□□□□ 0.52
PTP4A1-201ENST00000370651 GGPS1O95749 300 aa18.32■□□□□ 0.52
PTP4A1-201ENST00000370651 SPATA21Q7Z572 469 aa18.32■□□□□ 0.52
PTP4A1-201ENST00000370651 TTC13Q8NBP0 860 aa18.32■□□□□ 0.52
PTP4A1-201ENST00000370651 CXorf56Q9H5V9 222 aa18.32■□□□□ 0.52
PTP4A1-201ENST00000370651 POLD4Q9HCU8 107 aa18.32■□□□□ 0.52
PTP4A1-201ENST00000370651 AGTP01019 485 aa18.32■□□□□ 0.52
PTP4A1-201ENST00000370651 KRT14P02533 472 aa18.32■□□□□ 0.52
PTP4A1-201ENST00000370651 PI4KBQ9UBF8 816 aa18.32■□□□□ 0.52
PTP4A1-201ENST00000370651 RABL6Q3YEC7 729 aaPredicted RBP18.32■□□□□ 0.52
PTP4A1-201ENST00000370651 ZNF746Q6NUN9 644 aaPredicted RBP18.32■□□□□ 0.52
PTP4A1-201ENST00000370651 TMED8Q6PL24 325 aaPredicted RBP18.32■□□□□ 0.52
PTP4A1-201ENST00000370651 SESTD1Q86VW0 696 aa18.32■□□□□ 0.52
PTP4A1-201ENST00000370651 SNF8Q96H20 258 aa18.32■□□□□ 0.52
PTP4A1-201ENST00000370651 UPF3AQ9H1J1 476 aaKnown RBP18.32■□□□□ 0.52
PTP4A1-201ENST00000370651 RBM12Q9NTZ6 932 aaKnown RBP18.32■□□□□ 0.52
PTP4A1-201ENST00000370651 PCDHA6Q9UN73 950 aa18.32■□□□□ 0.52
PTP4A1-201ENST00000370651 ARL2BPQ9Y2Y0 163 aa18.32■□□□□ 0.52
PTP4A1-201ENST00000370651 PCDHA8Q9Y5H6 950 aa18.32■□□□□ 0.52
PTP4A1-201ENST00000370651 TARBP1Q13395 1621 aaKnown RBP18.32■□□□□ 0.52
PTP4A1-201ENST00000370651 FAM205CA6NFA0 338 aa18.31■□□□□ 0.52
PTP4A1-201ENST00000370651 HSPA4LO95757 839 aa18.31■□□□□ 0.52
PTP4A1-201ENST00000370651 FDPSP14324 419 aaKnown RBP18.31■□□□□ 0.52
PTP4A1-201ENST00000370651 EEF1B2P24534 225 aaKnown RBP18.31■□□□□ 0.52
PTP4A1-201ENST00000370651 FUT8Q9BYC5 575 aa18.31■□□□□ 0.52
PTP4A1-201ENST00000370651 INTS2Q9H0H0 1204 aaKnown RBP18.31■□□□□ 0.52
PTP4A1-201ENST00000370651 FHOD1Q9Y613 1164 aa18.31■□□□□ 0.52
PTP4A1-201ENST00000370651 WDR64B1ANS9 1081 aa18.31■□□□□ 0.52
PTP4A1-201ENST00000370651 FOXO4P98177 505 aa18.31■□□□□ 0.52
PTP4A1-201ENST00000370651 DYNC1I2Q13409 638 aaKnown RBP18.31■□□□□ 0.52
PTP4A1-201ENST00000370651 DCAF15Q66K64 600 aa18.31■□□□□ 0.52
PTP4A1-201ENST00000370651 MIS18BP1Q6P0N0 1132 aa18.31■□□□□ 0.52
PTP4A1-201ENST00000370651 CEP70Q8NHQ1 597 aa18.31■□□□□ 0.52
PTP4A1-201ENST00000370651 FAM161BQ96MY7 647 aa18.31■□□□□ 0.52
PTP4A1-201ENST00000370651 KLC2Q9H0B6 622 aa18.31■□□□□ 0.52
PTP4A1-201ENST00000370651 SMYD3Q9H7B4 428 aa18.31■□□□□ 0.52
PTP4A1-201ENST00000370651 CDHR2Q9BYE9 1310 aa18.31■□□□□ 0.52
PTP4A1-201ENST00000370651 BBOX1O75936 387 aa18.31■□□□□ 0.52
PTP4A1-201ENST00000370651 ELF1P32519 619 aa18.31■□□□□ 0.52
PTP4A1-201ENST00000370651 MTERF2Q49AM1 385 aa18.31■□□□□ 0.52
PTP4A1-201ENST00000370651 USP49Q70CQ1 688 aa18.31■□□□□ 0.52
PTP4A1-201ENST00000370651 SYNE4Q8N205 404 aa18.31■□□□□ 0.52
PTP4A1-201ENST00000370651 IL17RAQ96F46 866 aa18.31■□□□□ 0.52
PTP4A1-201ENST00000370651 POLR1AO95602 1720 aaPredicted RBP18.31■□□□□ 0.52
PTP4A1-201ENST00000370651 RASSF10A6NK89 507 aa18.31■□□□□ 0.52
PTP4A1-201ENST00000370651 TCP11X1B4DZS4 312 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms