RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 GPC3P51654 580 aa18.15■□□□□ 0.5
VMA21-202ENST00000370361 PSMC5P62195 406 aa18.15■□□□□ 0.5
VMA21-202ENST00000370361 SMAD4Q13485 552 aaKnown RBP18.15■□□□□ 0.5
VMA21-202ENST00000370361 NPY5RQ15761 445 aa18.15■□□□□ 0.5
VMA21-202ENST00000370361 SPOUT1Q5T280 376 aaKnown RBP18.15■□□□□ 0.5
VMA21-202ENST00000370361 EP400NLQ6ZTU2 488 aa18.15■□□□□ 0.5
VMA21-202ENST00000370361 TRMT1LQ7Z2T5 733 aaKnown RBP18.15■□□□□ 0.5
VMA21-202ENST00000370361 NEK8Q86SG6 692 aa18.15■□□□□ 0.5
VMA21-202ENST00000370361 ZNF410Q86VK4 478 aa18.15■□□□□ 0.5
VMA21-202ENST00000370361 ABI1Q8IZP0 508 aa18.15■□□□□ 0.5
VMA21-202ENST00000370361 EFHBQ8N7U6 833 aa18.15■□□□□ 0.5
VMA21-202ENST00000370361 POF1BQ8WVV4 589 aa18.15■□□□□ 0.5
VMA21-202ENST00000370361 UIMC1Q96RL1 719 aa18.15■□□□□ 0.5
VMA21-202ENST00000370361 GCOM2Q9BZD3 368 aaPredicted RBP18.15■□□□□ 0.5
VMA21-202ENST00000370361 TDP2O95551 362 aa18.14■□□□□ 0.49
VMA21-202ENST00000370361 EOMESO95936 686 aa18.14■□□□□ 0.49
VMA21-202ENST00000370361 SKIP12755 728 aa18.14■□□□□ 0.49
VMA21-202ENST00000370361 IL9P15248 144 aa18.14■□□□□ 0.49
VMA21-202ENST00000370361 SCRN1Q12765 414 aa18.14■□□□□ 0.49
VMA21-202ENST00000370361 STK3Q13188 491 aa18.14■□□□□ 0.49
VMA21-202ENST00000370361 PPP2R5CQ13362 524 aa18.14■□□□□ 0.49
VMA21-202ENST00000370361 CAMK1Q14012 370 aa18.14■□□□□ 0.49
VMA21-202ENST00000370361 SMAD2Q15796 467 aaKnown RBP18.14■□□□□ 0.49
VMA21-202ENST00000370361 ADHFE1Q8IWW8 467 aa18.14■□□□□ 0.49
VMA21-202ENST00000370361 LRRC43Q8N309 656 aa18.14■□□□□ 0.49
VMA21-202ENST00000370361 BRMS1Q9HCU9 246 aa18.14■□□□□ 0.49
VMA21-202ENST00000370361 SEPT9Q9UHD8 586 aaPredicted RBP18.14■□□□□ 0.49
VMA21-202ENST00000370361 PUF60Q9UHX1 559 aaKnown RBP18.14■□□□□ 0.49
VMA21-202ENST00000370361 MYO7AQ13402 2215 aa18.13■□□□□ 0.49
VMA21-202ENST00000370361 IGKV6-21A0A0C4DH24 114 aa18.13■□□□□ 0.49
VMA21-202ENST00000370361 GAS2O43903 313 aaKnown RBP18.13■□□□□ 0.49
VMA21-202ENST00000370361 SRGAP2BP0DMP2 458 aa18.13■□□□□ 0.49
VMA21-202ENST00000370361 SFPQP23246 707 aaKnown RBP eCLIP18.13■□□□□ 0.49
VMA21-202ENST00000370361 LTBRP36941 435 aa18.13■□□□□ 0.49
VMA21-202ENST00000370361 ADAM15Q13444 863 aa18.13■□□□□ 0.49
VMA21-202ENST00000370361 UGCGQ16739 394 aa18.13■□□□□ 0.49
VMA21-202ENST00000370361 INF2Q27J81 1249 aa18.13■□□□□ 0.49
VMA21-202ENST00000370361 LRRC71Q8N4P6 559 aa18.13■□□□□ 0.49
VMA21-202ENST00000370361 NLRP7Q8WX94 980 aa18.13■□□□□ 0.49
VMA21-202ENST00000370361 TRAIPQ9BWF2 469 aa18.13■□□□□ 0.49
VMA21-202ENST00000370361 MRPL9Q9BYD2 267 aaKnown RBP18.13■□□□□ 0.49
VMA21-202ENST00000370361 KCNMB3Q9NPA1 279 aa18.13■□□□□ 0.49
VMA21-202ENST00000370361 TLR9Q9NR96 1032 aa18.13■□□□□ 0.49
VMA21-202ENST00000370361 CD207Q9UJ71 328 aa18.13■□□□□ 0.49
VMA21-202ENST00000370361 HCN4Q9Y3Q4 1203 aa18.13■□□□□ 0.49
VMA21-202ENST00000370361 A0A0U1RQF3 1178 aa18.12■□□□□ 0.49
VMA21-202ENST00000370361 FGF18O76093 207 aa18.12■□□□□ 0.49
VMA21-202ENST00000370361 EYA4O95677 639 aa18.12■□□□□ 0.49
VMA21-202ENST00000370361 QARSP47897 775 aaKnown RBP18.12■□□□□ 0.49
VMA21-202ENST00000370361 NDUFV1P49821 464 aa18.12■□□□□ 0.49
VMA21-202ENST00000370361 PLCB3Q01970 1234 aa18.12■□□□□ 0.49
VMA21-202ENST00000370361 ZP2Q05996 745 aa18.12■□□□□ 0.49
VMA21-202ENST00000370361 LETM2Q2VYF4 491 aa18.12■□□□□ 0.49
VMA21-202ENST00000370361 ECHDC2Q86YB7 292 aa18.12■□□□□ 0.49
VMA21-202ENST00000370361 SLFN12Q8IYM2 578 aa18.12■□□□□ 0.49
VMA21-202ENST00000370361 THNSL1Q8IYQ7 743 aa18.12■□□□□ 0.49
VMA21-202ENST00000370361 COLGALT1Q8NBJ5 622 aa18.12■□□□□ 0.49
VMA21-202ENST00000370361 PPP1R16BQ96T49 567 aa18.12■□□□□ 0.49
VMA21-202ENST00000370361 EPHX3Q9H6B9 360 aa18.12■□□□□ 0.49
VMA21-202ENST00000370361 C19orf67A6NJJ6 358 aa18.11■□□□□ 0.49
VMA21-202ENST00000370361 MBTPS2O43462 519 aa18.11■□□□□ 0.49
VMA21-202ENST00000370361 MAFO75444 373 aaPredicted RBP18.11■□□□□ 0.49
VMA21-202ENST00000370361 P4HBP07237 508 aaKnown RBP18.11■□□□□ 0.49
VMA21-202ENST00000370361 GATMP50440 423 aa18.11■□□□□ 0.49
VMA21-202ENST00000370361 KRT17Q04695 432 aa18.11■□□□□ 0.49
VMA21-202ENST00000370361 COASYQ13057 564 aa18.11■□□□□ 0.49
VMA21-202ENST00000370361 MTERF2Q49AM1 385 aa18.11■□□□□ 0.49
VMA21-202ENST00000370361 FAM102BQ5T8I3 360 aa18.11■□□□□ 0.49
VMA21-202ENST00000370361 SLC7A3Q8WY07 619 aa18.11■□□□□ 0.49
VMA21-202ENST00000370361 NGRNQ9NPE2 291 aaKnown RBP18.11■□□□□ 0.49
VMA21-202ENST00000370361 TYW1Q9NV66 732 aaKnown RBP18.11■□□□□ 0.49
VMA21-202ENST00000370361 TPCN1Q9ULQ1 816 aa18.11■□□□□ 0.49
VMA21-202ENST00000370361 RBAK-RBAKDNI3L0D1 243 aa18.1■□□□□ 0.49
VMA21-202ENST00000370361 TBX10O75333 385 aa18.1■□□□□ 0.49
VMA21-202ENST00000370361 BAG4O95429 457 aaKnown RBP18.1■□□□□ 0.49
VMA21-202ENST00000370361 DNAJB1P25685 340 aa18.1■□□□□ 0.49
VMA21-202ENST00000370361 RAB27AP51159 221 aa18.1■□□□□ 0.49
VMA21-202ENST00000370361 BMS1Q14692 1282 aaKnown RBP18.1■□□□□ 0.49
VMA21-202ENST00000370361 MICAL1Q8TDZ2 1067 aa18.1■□□□□ 0.49
VMA21-202ENST00000370361 MRPS27Q92552 414 aaKnown RBP18.1■□□□□ 0.49
VMA21-202ENST00000370361 MSLNLQ96KJ4 702 aa18.1■□□□□ 0.49
VMA21-202ENST00000370361 ZNF558Q96NG5 402 aa18.1■□□□□ 0.49
VMA21-202ENST00000370361 AIFM3Q96NN9 605 aa18.1■□□□□ 0.49
VMA21-202ENST00000370361 CASD1Q96PB1 797 aa18.1■□□□□ 0.49
VMA21-202ENST00000370361 CEP89Q96ST8 783 aa18.1■□□□□ 0.49
VMA21-202ENST00000370361 LRFN3Q9BTN0 628 aa18.1■□□□□ 0.49
VMA21-202ENST00000370361 IGFLR1Q9H665 355 aa18.1■□□□□ 0.49
VMA21-202ENST00000370361 CWH43Q9H720 699 aa18.1■□□□□ 0.49
VMA21-202ENST00000370361 TLE6Q9H808 572 aa18.1■□□□□ 0.49
VMA21-202ENST00000370361 ORC3Q9UBD5 711 aaPredicted RBP18.1■□□□□ 0.49
VMA21-202ENST00000370361 KCNJ14Q9UNX9 436 aa18.1■□□□□ 0.49
VMA21-202ENST00000370361 DDX11L8A8MPP1 907 aa18.09■□□□□ 0.49
VMA21-202ENST00000370361 PRR33A8MZF0 331 aa18.09■□□□□ 0.49
VMA21-202ENST00000370361 DCXO43602 365 aa18.09■□□□□ 0.49
VMA21-202ENST00000370361 SLC37A4O43826 429 aa18.09■□□□□ 0.49
VMA21-202ENST00000370361 MARCH6O60337 910 aa18.09■□□□□ 0.49
VMA21-202ENST00000370361 CCNT1O60563 726 aaKnown RBP18.09■□□□□ 0.49
VMA21-202ENST00000370361 STBD1O95210 358 aa18.09■□□□□ 0.49
VMA21-202ENST00000370361 FGFR1P11362 822 aa18.09■□□□□ 0.49
VMA21-202ENST00000370361 IBSPP21815 317 aaPredicted RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms