RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 OCRLQ01968 901 aa9.16□□□□□ -0.94
ABCA4-201ENST00000370225 FAM167AQ96KS9 214 aa9.16□□□□□ -0.94
ABCA4-201ENST00000370225 GBP5Q96PP8 586 aa9.16□□□□□ -0.94
ABCA4-201ENST00000370225 LBHD1Q9BQE6 289 aaPredicted RBP9.16□□□□□ -0.94
ABCA4-201ENST00000370225 BRIP1Q9BX63 1249 aa9.16□□□□□ -0.94
ABCA4-201ENST00000370225 PIN4Q9Y237 131 aaKnown RBP9.16□□□□□ -0.94
ABCA4-201ENST00000370225 SYNMO15061 1565 aa9.16□□□□□ -0.94
ABCA4-201ENST00000370225 H7C1W4 665 aa9.16□□□□□ -0.94
ABCA4-201ENST00000370225 DHX9Q08211 1270 aaKnown RBP9.16□□□□□ -0.94
ABCA4-201ENST00000370225 TAF1CQ15572 869 aaPredicted RBP9.16□□□□□ -0.94
ABCA4-201ENST00000370225 LRRC31Q6UY01 552 aa9.16□□□□□ -0.94
ABCA4-201ENST00000370225 PODNQ7Z5L7 613 aa9.16□□□□□ -0.94
ABCA4-201ENST00000370225 LCA5Q86VQ0 697 aa9.16□□□□□ -0.94
ABCA4-201ENST00000370225 PGBD3Q8N328 593 aa9.16□□□□□ -0.94
ABCA4-201ENST00000370225 ADAM22Q9P0K1 906 aa9.16□□□□□ -0.94
ABCA4-201ENST00000370225 NPHP3-ACAD11A0A0J9YXS1 232 aa9.16□□□□□ -0.94
ABCA4-201ENST00000370225 F5H6K3 240 aa9.16□□□□□ -0.94
ABCA4-201ENST00000370225 SNX2O60749 519 aa9.16□□□□□ -0.94
ABCA4-201ENST00000370225 KITP10721 976 aa9.16□□□□□ -0.94
ABCA4-201ENST00000370225 DR1Q01658 176 aa9.16□□□□□ -0.94
ABCA4-201ENST00000370225 KLRC3Q07444 240 aa9.16□□□□□ -0.94
ABCA4-201ENST00000370225 NFIXQ14938 502 aa9.16□□□□□ -0.94
ABCA4-201ENST00000370225 FAM133BQ5BKY9 247 aaKnown RBP9.16□□□□□ -0.94
ABCA4-201ENST00000370225 TRMT10CQ7L0Y3 403 aaKnown RBP9.16□□□□□ -0.94
ABCA4-201ENST00000370225 BCAS4Q8TDM0 211 aa9.16□□□□□ -0.94
ABCA4-201ENST00000370225 GCOM2Q9BZD3 368 aaPredicted RBP9.16□□□□□ -0.94
ABCA4-201ENST00000370225 ACAD9Q9H845 621 aa9.16□□□□□ -0.94
ABCA4-201ENST00000370225 AP3B2Q13367 1082 aa9.15□□□□□ -0.94
ABCA4-201ENST00000370225 LXNQ9BS40 222 aa9.15□□□□□ -0.94
ABCA4-201ENST00000370225 YIPF2Q9BWQ6 316 aa9.15□□□□□ -0.94
ABCA4-201ENST00000370225 SP110Q9HB58 689 aa9.15□□□□□ -0.94
ABCA4-201ENST00000370225 ANLNQ9NQW6 1124 aa9.15□□□□□ -0.94
ABCA4-201ENST00000370225 FRMD3A2A2Y4 597 aa9.15□□□□□ -0.94
ABCA4-201ENST00000370225 IQCA1LA6NCM1 817 aa9.15□□□□□ -0.94
ABCA4-201ENST00000370225 HMBSP08397 361 aa9.15□□□□□ -0.94
ABCA4-201ENST00000370225 CYP2B6P20813 491 aa9.15□□□□□ -0.94
ABCA4-201ENST00000370225 ART3Q13508 389 aa9.15□□□□□ -0.94
ABCA4-201ENST00000370225 ENAHQ8N8S7 591 aaPredicted RBP9.15□□□□□ -0.94
ABCA4-201ENST00000370225 SPZ1Q9BXG8 430 aa9.15□□□□□ -0.94
ABCA4-201ENST00000370225 ADAMTS1Q9UHI8 967 aa9.15□□□□□ -0.94
ABCA4-201ENST00000370225 CCDC195A0A1B0GUA6 201 aa9.15□□□□□ -0.94
ABCA4-201ENST00000370225 A0A1B0GUA9 196 aa9.15□□□□□ -0.94
ABCA4-201ENST00000370225 KBTBD13C9JR72 458 aa9.15□□□□□ -0.94
ABCA4-201ENST00000370225 PAMP19021 973 aa9.15□□□□□ -0.94
ABCA4-201ENST00000370225 KCNJ6P48051 423 aa9.15□□□□□ -0.94
ABCA4-201ENST00000370225 ZNF746Q6NUN9 644 aaPredicted RBP9.15□□□□□ -0.94
ABCA4-201ENST00000370225 RSBN1LQ6PCB5 846 aaPredicted RBP9.15□□□□□ -0.94
ABCA4-201ENST00000370225 A8MXQ7 604 aa9.15□□□□□ -0.94
ABCA4-201ENST00000370225 NR3C1P04150 777 aa9.15□□□□□ -0.94
ABCA4-201ENST00000370225 PPARGP37231 505 aaPredicted RBP9.15□□□□□ -0.94
ABCA4-201ENST00000370225 SYCP2LQ5T4T6 812 aa9.15□□□□□ -0.94
ABCA4-201ENST00000370225 PHLDB3Q6NSJ2 640 aa9.15□□□□□ -0.94
ABCA4-201ENST00000370225 RNF135Q8IUD6 432 aa9.15□□□□□ -0.94
ABCA4-201ENST00000370225 FBXL13Q8NEE6 735 aa9.15□□□□□ -0.94
ABCA4-201ENST00000370225 WHAMMQ8TF30 809 aa9.15□□□□□ -0.94
ABCA4-201ENST00000370225 SH3KBP1Q96B97 665 aa9.15□□□□□ -0.94
ABCA4-201ENST00000370225 ASIC4Q96FT7 647 aa9.15□□□□□ -0.94
ABCA4-201ENST00000370225 DCP1AQ9NPI6 582 aaPredicted RBP9.15□□□□□ -0.94
ABCA4-201ENST00000370225 TTC7AQ9ULT0 858 aaPredicted RBP9.15□□□□□ -0.94
ABCA4-201ENST00000370225 E5RI56 91 aa9.15□□□□□ -0.95
ABCA4-201ENST00000370225 TXNP10599 105 aaKnown RBP9.15□□□□□ -0.95
ABCA4-201ENST00000370225 CCNE1P24864 410 aa9.15□□□□□ -0.95
ABCA4-201ENST00000370225 PSMC5P62195 406 aa9.15□□□□□ -0.95
ABCA4-201ENST00000370225 TAS2R42Q7RTR8 314 aa9.15□□□□□ -0.95
ABCA4-201ENST00000370225 ZNF513Q8N8E2 541 aaPredicted RBP9.15□□□□□ -0.95
ABCA4-201ENST00000370225 RAD54LQ92698 747 aa9.15□□□□□ -0.95
ABCA4-201ENST00000370225 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.15□□□□□ -0.95
ABCA4-201ENST00000370225 CLASP1Q7Z460 1538 aa9.15□□□□□ -0.95
ABCA4-201ENST00000370225 PP2D1A8MPX8 630 aa9.15□□□□□ -0.95
ABCA4-201ENST00000370225 SCARF1Q14162 830 aa9.15□□□□□ -0.95
ABCA4-201ENST00000370225 CAPRIN1Q14444 709 aaKnown RBP9.15□□□□□ -0.95
ABCA4-201ENST00000370225 MAGI3Q5TCQ9 1506 aa9.14□□□□□ -0.95
ABCA4-201ENST00000370225 CFAP69A5D8W1 941 aa9.14□□□□□ -0.95
ABCA4-201ENST00000370225 C6orf222P0C671 652 aaPredicted RBP9.14□□□□□ -0.95
ABCA4-201ENST00000370225 LIG3P49916 1009 aa9.14□□□□□ -0.95
ABCA4-201ENST00000370225 HDLBPQ00341 1268 aaKnown RBP9.14□□□□□ -0.95
ABCA4-201ENST00000370225 ALCAMQ13740 583 aa9.14□□□□□ -0.95
ABCA4-201ENST00000370225 CC2D1AQ6P1N0 951 aaPredicted RBP9.14□□□□□ -0.95
ABCA4-201ENST00000370225 MB21D1Q8N884 522 aa9.14□□□□□ -0.95
ABCA4-201ENST00000370225 NCLNQ969V3 563 aa9.14□□□□□ -0.95
ABCA4-201ENST00000370225 C11orf70Q9BRQ4 267 aa9.14□□□□□ -0.95
ABCA4-201ENST00000370225 SH3GLB2Q9NR46 395 aa9.14□□□□□ -0.95
ABCA4-201ENST00000370225 EPS15L1Q9UBC2 864 aa9.14□□□□□ -0.95
ABCA4-201ENST00000370225 CNOT8Q9UFF9 292 aaKnown RBP9.14□□□□□ -0.95
ABCA4-201ENST00000370225 TRPA1O75762 1119 aa9.14□□□□□ -0.95
ABCA4-201ENST00000370225 KRT31Q15323 416 aa9.14□□□□□ -0.95
ABCA4-201ENST00000370225 PFKFB3Q16875 520 aaPredicted RBP9.14□□□□□ -0.95
ABCA4-201ENST00000370225 QRICH1Q2TAL8 776 aa9.14□□□□□ -0.95
ABCA4-201ENST00000370225 PBXIP1Q96AQ6 731 aa9.14□□□□□ -0.95
ABCA4-201ENST00000370225 JRKLQ9Y4A0 524 aa9.14□□□□□ -0.95
ABCA4-201ENST00000370225 IPO5O00410 1097 aaKnown RBP9.14□□□□□ -0.95
ABCA4-201ENST00000370225 TJP3O95049 919 aa9.14□□□□□ -0.95
ABCA4-201ENST00000370225 IGKV5-2P06315 115 aa9.14□□□□□ -0.95
ABCA4-201ENST00000370225 ETF1P62495 437 aaKnown RBP9.14□□□□□ -0.95
ABCA4-201ENST00000370225 GFPT1Q06210 699 aaPredicted RBP9.14□□□□□ -0.95
ABCA4-201ENST00000370225 COASYQ13057 564 aa9.14□□□□□ -0.95
ABCA4-201ENST00000370225 ANGEL2Q5VTE6 544 aaKnown RBP9.14□□□□□ -0.95
ABCA4-201ENST00000370225 MRFAP1L1Q96HT8 127 aa9.14□□□□□ -0.95
ABCA4-201ENST00000370225 COG4Q9H9E3 785 aa9.14□□□□□ -0.95
ABCA4-201ENST00000370225 SAYSD1Q9NPB0 183 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms