RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 ADAMTS10Q9H324 1103 aa17.5■□□□□ 0.39
SSR4-204ENST00000370087 LIMD1Q9UGP4 676 aa17.5■□□□□ 0.39
SSR4-204ENST00000370087 RIF1Q5UIP0 2472 aaKnown RBP17.5■□□□□ 0.39
SSR4-204ENST00000370087 PTPRZ1P23471 2315 aaPredicted RBP17.5■□□□□ 0.39
SSR4-204ENST00000370087 CALM1P0DP23 149 aa17.49■□□□□ 0.39
SSR4-204ENST00000370087 CALM2P0DP24 149 aa17.49■□□□□ 0.39
SSR4-204ENST00000370087 CALM3P0DP25 149 aa17.49■□□□□ 0.39
SSR4-204ENST00000370087 EPCAMP16422 314 aa17.49■□□□□ 0.39
SSR4-204ENST00000370087 FGFR4P22455 802 aa17.49■□□□□ 0.39
SSR4-204ENST00000370087 CLK2P49760 499 aaKnown RBP17.49■□□□□ 0.39
SSR4-204ENST00000370087 METAP2P50579 478 aaKnown RBP eCLIP17.49■□□□□ 0.393e-6■■■■□ 21.8
SSR4-204ENST00000370087 ADCY7P51828 1080 aa17.49■□□□□ 0.39
SSR4-204ENST00000370087 NLRP11P59045 1033 aaKnown RBP17.49■□□□□ 0.39
SSR4-204ENST00000370087 FUT2Q10981 343 aa17.49■□□□□ 0.39
SSR4-204ENST00000370087 ZNF598Q86UK7 904 aaKnown RBP17.49■□□□□ 0.39
SSR4-204ENST00000370087 LRRC71Q8N4P6 559 aa17.49■□□□□ 0.39
SSR4-204ENST00000370087 TDRD5Q8NAT2 981 aaKnown RBP17.49■□□□□ 0.39
SSR4-204ENST00000370087 HELQQ8TDG4 1101 aa17.49■□□□□ 0.39
SSR4-204ENST00000370087 SLC12A7Q9Y666 1083 aa17.49■□□□□ 0.39
SSR4-204ENST00000370087 HOXA2O43364 376 aa17.48■□□□□ 0.39
SSR4-204ENST00000370087 PI15O43692 258 aa17.48■□□□□ 0.39
SSR4-204ENST00000370087 CA8P35219 290 aa17.48■□□□□ 0.39
SSR4-204ENST00000370087 MTHFRP42898 656 aa17.48■□□□□ 0.39
SSR4-204ENST00000370087 KRT17Q04695 432 aa17.48■□□□□ 0.39
SSR4-204ENST00000370087 KIAA1841Q6NSI8 718 aa17.48■□□□□ 0.39
SSR4-204ENST00000370087 PPP1R18Q6NYC8 613 aa17.48■□□□□ 0.39
SSR4-204ENST00000370087 MIS18BP1Q6P0N0 1132 aa17.48■□□□□ 0.39
SSR4-204ENST00000370087 FAM43BQ6ZT52 329 aaPredicted RBP17.48■□□□□ 0.39
SSR4-204ENST00000370087 NIPA1Q7RTP0 329 aa17.48■□□□□ 0.39
SSR4-204ENST00000370087 PLA2G4DQ86XP0 818 aa17.48■□□□□ 0.39
SSR4-204ENST00000370087 CKAP2LQ8IYA6 745 aa17.48■□□□□ 0.39
SSR4-204ENST00000370087 ZDHHC14Q8IZN3 488 aa17.48■□□□□ 0.39
SSR4-204ENST00000370087 ABI1Q8IZP0 508 aa17.48■□□□□ 0.39
SSR4-204ENST00000370087 ADSSL1Q8N142 457 aa17.48■□□□□ 0.39
SSR4-204ENST00000370087 BCL7CQ8WUZ0 217 aaPredicted RBP17.48■□□□□ 0.39
SSR4-204ENST00000370087 LSG1Q9H089 658 aaKnown RBP17.48■□□□□ 0.39
SSR4-204ENST00000370087 ZBP1Q9H171 429 aa17.48■□□□□ 0.39
SSR4-204ENST00000370087 MAFBQ9Y5Q3 323 aaPredicted RBP17.48■□□□□ 0.39
SSR4-204ENST00000370087 GVINP1Q7Z2Y8 2422 aa17.48■□□□□ 0.39
SSR4-204ENST00000370087 FRYLO94915 3013 aa17.47■□□□□ 0.39
SSR4-204ENST00000370087 IPO5O00410 1097 aaKnown RBP17.47■□□□□ 0.39
SSR4-204ENST00000370087 SLC27A2O14975 620 aa17.47■□□□□ 0.39
SSR4-204ENST00000370087 NPR3P17342 541 aa17.47■□□□□ 0.39
SSR4-204ENST00000370087 ZNF76P36508 570 aa17.47■□□□□ 0.39
SSR4-204ENST00000370087 BCAR1P56945 870 aa17.47■□□□□ 0.39
SSR4-204ENST00000370087 TMTC2Q8N394 836 aa17.47■□□□□ 0.39
SSR4-204ENST00000370087 CRYGNQ8WXF5 182 aa17.47■□□□□ 0.39
SSR4-204ENST00000370087 BBXQ8WY36 941 aaPredicted RBP17.47■□□□□ 0.39
SSR4-204ENST00000370087 NKD2Q969F2 451 aaPredicted RBP17.47■□□□□ 0.39
SSR4-204ENST00000370087 MFSD1Q9H3U5 465 aa17.47■□□□□ 0.39
SSR4-204ENST00000370087 AKT3Q9Y243 479 aa17.47■□□□□ 0.39
SSR4-204ENST00000370087 ZNF292O60281 2723 aa17.47■□□□□ 0.39
SSR4-204ENST00000370087 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.46■□□□□ 0.39
SSR4-204ENST00000370087 SMCO2A6NFE2 343 aa17.46■□□□□ 0.39
SSR4-204ENST00000370087 CSDE1O75534 798 aaKnown RBP17.46■□□□□ 0.39
SSR4-204ENST00000370087 CXCL14O95715 111 aa17.46■□□□□ 0.39
SSR4-204ENST00000370087 EOMESO95936 686 aa17.46■□□□□ 0.39
SSR4-204ENST00000370087 FOSP01100 380 aaPredicted RBP17.46■□□□□ 0.39
SSR4-204ENST00000370087 CLCN5P51795 746 aa17.46■□□□□ 0.39
SSR4-204ENST00000370087 JAKMIP3Q5VZ66 844 aa17.46■□□□□ 0.39
SSR4-204ENST00000370087 EFCAB12Q6NXP0 572 aa17.46■□□□□ 0.39
SSR4-204ENST00000370087 SGMS1Q86VZ5 419 aa17.46■□□□□ 0.39
SSR4-204ENST00000370087 FLCNQ8NFG4 579 aa17.46■□□□□ 0.39
SSR4-204ENST00000370087 SLC22A17Q8WUG5 538 aa17.46■□□□□ 0.39
SSR4-204ENST00000370087 VN1R3Q9BXE9 311 aa17.46■□□□□ 0.39
SSR4-204ENST00000370087 GABBR1Q9UBS5 961 aa17.46■□□□□ 0.39
SSR4-204ENST00000370087 DBR1Q9UK59 544 aaKnown RBP17.46■□□□□ 0.39
SSR4-204ENST00000370087 CACNA1AO00555 2505 aa17.46■□□□□ 0.38
SSR4-204ENST00000370087 B4GALT3O60512 393 aa17.45■□□□□ 0.38
SSR4-204ENST00000370087 EIF4BP23588 611 aaKnown RBP17.45■□□□□ 0.38
SSR4-204ENST00000370087 ID4P47928 161 aa17.45■□□□□ 0.38
SSR4-204ENST00000370087 GPC3P51654 580 aa17.45■□□□□ 0.38
SSR4-204ENST00000370087 AP3B2Q13367 1082 aa17.45■□□□□ 0.38
SSR4-204ENST00000370087 MCTP2Q6DN12 878 aa17.45■□□□□ 0.38
SSR4-204ENST00000370087 APOA5Q6Q788 366 aa17.45■□□□□ 0.38
SSR4-204ENST00000370087 TMC5Q6UXY8 1006 aa17.45■□□□□ 0.38
SSR4-204ENST00000370087 VPS52Q8N1B4 723 aa17.45■□□□□ 0.38
SSR4-204ENST00000370087 BRPF3Q9ULD4 1205 aa17.45■□□□□ 0.38
SSR4-204ENST00000370087 A0A0U1RQF3 1178 aa17.44■□□□□ 0.38
SSR4-204ENST00000370087 MEIS3P2A8K0S8 358 aa17.44■□□□□ 0.38
SSR4-204ENST00000370087 ZNF862O60290 1169 aa17.44■□□□□ 0.38
SSR4-204ENST00000370087 DARSP14868 501 aaKnown RBP17.44■□□□□ 0.38
SSR4-204ENST00000370087 ZSCAN20P17040 1043 aaPredicted RBP17.44■□□□□ 0.38
SSR4-204ENST00000370087 DRP2Q13474 957 aa17.44■□□□□ 0.38
SSR4-204ENST00000370087 LONRF3Q496Y0 759 aa17.44■□□□□ 0.38
SSR4-204ENST00000370087 CREB3L3Q68CJ9 461 aa17.44■□□□□ 0.38
SSR4-204ENST00000370087 ZNF746Q6NUN9 644 aaPredicted RBP17.44■□□□□ 0.38
SSR4-204ENST00000370087 LPPQ93052 612 aa17.44■□□□□ 0.38
SSR4-204ENST00000370087 TCEANC2Q96MN5 208 aa17.44■□□□□ 0.38
SSR4-204ENST00000370087 ZNF577Q9BSK1 485 aa17.44■□□□□ 0.38
SSR4-204ENST00000370087 DZANK1Q9NVP4 752 aa17.44■□□□□ 0.38
SSR4-204ENST00000370087 BARHL2Q9NY43 387 aa17.44■□□□□ 0.38
SSR4-204ENST00000370087 USTQ9Y2C2 406 aa17.44■□□□□ 0.38
SSR4-204ENST00000370087 V9GY48 417 aaPredicted RBP17.44■□□□□ 0.38
SSR4-204ENST00000370087 ZC3H11AO75152 810 aaKnown RBP eCLIP17.43■□□□□ 0.38
SSR4-204ENST00000370087 CYP3A4P08684 503 aa17.43■□□□□ 0.38
SSR4-204ENST00000370087 AOC1P19801 751 aa17.43■□□□□ 0.38
SSR4-204ENST00000370087 UGCGQ16739 394 aa17.43■□□□□ 0.38
SSR4-204ENST00000370087 ATAT1Q5SQI0 421 aa17.43■□□□□ 0.38
SSR4-204ENST00000370087 ERMP1Q7Z2K6 904 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms