RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 CYP2W1Q8TAV3 490 aa7.6□□□□□ -1.19
CSDE1-204ENST00000369530 RAET1EQ8TD07 263 aa7.6□□□□□ -1.19
CSDE1-204ENST00000369530 COPS5Q92905 334 aa7.6□□□□□ -1.19
CSDE1-204ENST00000369530 ZSCAN31Q96LW9 406 aaPredicted RBP7.6□□□□□ -1.19
CSDE1-204ENST00000369530 MXRA8Q9BRK3 442 aa7.6□□□□□ -1.19
CSDE1-204ENST00000369530 FAM184BQ9ULE4 1060 aa7.6□□□□□ -1.19
CSDE1-204ENST00000369530 L1RE1Q9UN81 338 aa7.6□□□□□ -1.19
CSDE1-204ENST00000369530 ATP6V1DQ9Y5K8 247 aa7.6□□□□□ -1.19
CSDE1-204ENST00000369530 STX6O43752 255 aa7.6□□□□□ -1.19
CSDE1-204ENST00000369530 RASSF9O75901 435 aa7.6□□□□□ -1.19
CSDE1-204ENST00000369530 RTP1P59025 263 aa7.6□□□□□ -1.19
CSDE1-204ENST00000369530 WTAPQ15007 396 aa7.6□□□□□ -1.19
CSDE1-204ENST00000369530 NFXL1Q6ZNB6 911 aa7.6□□□□□ -1.19
CSDE1-204ENST00000369530 FIZ1Q96SL8 496 aa7.6□□□□□ -1.19
CSDE1-204ENST00000369530 CCPG1Q9ULG6 757 aa7.6□□□□□ -1.19
CSDE1-204ENST00000369530 GUCY1B3Q02153 619 aa7.6□□□□□ -1.19
CSDE1-204ENST00000369530 HDXQ7Z353 690 aa7.6□□□□□ -1.19
CSDE1-204ENST00000369530 TLK2Q86UE8 772 aa7.6□□□□□ -1.19
CSDE1-204ENST00000369530 TRIM74Q86UV6 250 aa7.6□□□□□ -1.19
CSDE1-204ENST00000369530 TRIM73Q86UV7 250 aa7.6□□□□□ -1.19
CSDE1-204ENST00000369530 CCDC150Q8NCX0 1101 aa7.6□□□□□ -1.19
CSDE1-204ENST00000369530 N4BP2L2Q92802 583 aaPredicted RBP7.6□□□□□ -1.19
CSDE1-204ENST00000369530 ZNF862O60290 1169 aa7.59□□□□□ -1.19
CSDE1-204ENST00000369530 ZEB2O60315 1214 aa7.59□□□□□ -1.19
CSDE1-204ENST00000369530 CHRNA1P02708 482 aa7.59□□□□□ -1.19
CSDE1-204ENST00000369530 FESP07332 822 aa7.59□□□□□ -1.19
CSDE1-204ENST00000369530 NR3C2P08235 984 aa7.59□□□□□ -1.19
CSDE1-204ENST00000369530 SETSIPP0DME0 302 aa7.59□□□□□ -1.19
CSDE1-204ENST00000369530 RFC2P35250 354 aa7.59□□□□□ -1.19
CSDE1-204ENST00000369530 AMHR2Q16671 573 aa7.59□□□□□ -1.19
CSDE1-204ENST00000369530 LY6KQ17RY6 165 aa7.59□□□□□ -1.19
CSDE1-204ENST00000369530 RINLQ6ZS11 566 aa7.59□□□□□ -1.19
CSDE1-204ENST00000369530 FBXO11Q86XK2 927 aa7.59□□□□□ -1.19
CSDE1-204ENST00000369530 MYL10Q9BUA6 226 aa7.59□□□□□ -1.19
CSDE1-204ENST00000369530 WDR11Q9BZH6 1224 aa7.59□□□□□ -1.19
CSDE1-204ENST00000369530 CHCHD3Q9NX63 227 aaKnown RBP7.59□□□□□ -1.19
CSDE1-204ENST00000369530 CITO14578 2027 aa7.59□□□□□ -1.19
CSDE1-204ENST00000369530 A0A1B0GUA9 196 aa7.59□□□□□ -1.19
CSDE1-204ENST00000369530 FANCGO15287 622 aa7.59□□□□□ -1.19
CSDE1-204ENST00000369530 KPNA6O60684 536 aa7.59□□□□□ -1.19
CSDE1-204ENST00000369530 SYT1P21579 422 aa7.59□□□□□ -1.19
CSDE1-204ENST00000369530 TXLNAP40222 546 aa7.59□□□□□ -1.19
CSDE1-204ENST00000369530 USP11P51784 963 aa7.59□□□□□ -1.19
CSDE1-204ENST00000369530 GNL2Q13823 731 aaKnown RBP7.59□□□□□ -1.19
CSDE1-204ENST00000369530 GJC2Q5T442 439 aaPredicted RBP7.59□□□□□ -1.19
CSDE1-204ENST00000369530 CNNM4Q6P4Q7 775 aa7.59□□□□□ -1.19
CSDE1-204ENST00000369530 SMCR8Q8TEV9 937 aaPredicted RBP7.59□□□□□ -1.19
CSDE1-204ENST00000369530 HSD17B14Q9BPX1 270 aa7.59□□□□□ -1.19
CSDE1-204ENST00000369530 IRX2Q9BZI1 471 aaPredicted RBP7.59□□□□□ -1.19
CSDE1-204ENST00000369530 SH2B1Q9NRF2 756 aaPredicted RBP7.59□□□□□ -1.19
CSDE1-204ENST00000369530 PCDH10Q9P2E7 1040 aa7.59□□□□□ -1.19
CSDE1-204ENST00000369530 FAM237AA0A1B0GTK4 181 aa7.59□□□□□ -1.2
CSDE1-204ENST00000369530 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.59□□□□□ -1.2
CSDE1-204ENST00000369530 CCDC69A6NI79 296 aa7.59□□□□□ -1.2
CSDE1-204ENST00000369530 FSCN2O14926 492 aa7.59□□□□□ -1.2
CSDE1-204ENST00000369530 RTN3O95197 1032 aaPredicted RBP7.59□□□□□ -1.2
CSDE1-204ENST00000369530 F13A1P00488 732 aa7.59□□□□□ -1.2
CSDE1-204ENST00000369530 SMTNP53814 917 aa7.59□□□□□ -1.2
CSDE1-204ENST00000369530 KIF22Q14807 665 aa7.59□□□□□ -1.2
CSDE1-204ENST00000369530 MFSD14CQ5VZR4 134 aa7.59□□□□□ -1.2
CSDE1-204ENST00000369530 FAM173BQ6P4H8 233 aa7.59□□□□□ -1.2
CSDE1-204ENST00000369530 METTL7BQ6UX53 244 aa7.59□□□□□ -1.2
CSDE1-204ENST00000369530 ZFAND2BQ8WV99 257 aa7.59□□□□□ -1.2
CSDE1-204ENST00000369530 LLPHQ9BRT6 129 aaKnown RBP7.59□□□□□ -1.2
CSDE1-204ENST00000369530 NFKBIZQ9BYH8 718 aa7.59□□□□□ -1.2
CSDE1-204ENST00000369530 CCDC113Q9H0I3 377 aa7.59□□□□□ -1.2
CSDE1-204ENST00000369530 XPNPEP3Q9NQH7 507 aa7.59□□□□□ -1.2
CSDE1-204ENST00000369530 DDX19AQ9NUU7 478 aaKnown RBP7.59□□□□□ -1.2
CSDE1-204ENST00000369530 MRFAP1Q9Y605 127 aa7.59□□□□□ -1.2
CSDE1-204ENST00000369530 SRRM3A6NNA2 597 aaPredicted RBP7.58□□□□□ -1.2
CSDE1-204ENST00000369530 KIF28PB7ZC32 967 aa7.58□□□□□ -1.2
CSDE1-204ENST00000369530 AHCYL1O43865 530 aa7.58□□□□□ -1.2
CSDE1-204ENST00000369530 SPATA31C1P0DKV0 1188 aa7.58□□□□□ -1.2
CSDE1-204ENST00000369530 HOXA13P31271 388 aaPredicted RBP7.58□□□□□ -1.2
CSDE1-204ENST00000369530 PTK7Q13308 1070 aa7.58□□□□□ -1.2
CSDE1-204ENST00000369530 ORC2Q13416 577 aaPredicted RBP7.58□□□□□ -1.2
CSDE1-204ENST00000369530 DRP2Q13474 957 aa7.58□□□□□ -1.2
CSDE1-204ENST00000369530 CAMK1Q14012 370 aa7.58□□□□□ -1.2
CSDE1-204ENST00000369530 C9orf50Q5SZB4 431 aa7.58□□□□□ -1.2
CSDE1-204ENST00000369530 TAX1BP1Q86VP1 789 aa7.58□□□□□ -1.2
CSDE1-204ENST00000369530 IQCA1Q86XH1 822 aa7.58□□□□□ -1.2
CSDE1-204ENST00000369530 MCF2L2Q86YR7 1114 aa7.58□□□□□ -1.2
CSDE1-204ENST00000369530 ATL2Q8NHH9 583 aa7.58□□□□□ -1.2
CSDE1-204ENST00000369530 CLP1Q92989 425 aaKnown RBP7.58□□□□□ -1.2
CSDE1-204ENST00000369530 AGAP3Q96P47 875 aa7.58□□□□□ -1.2
CSDE1-204ENST00000369530 RNF208Q9H0X6 261 aa7.58□□□□□ -1.2
CSDE1-204ENST00000369530 CLSTN2Q9H4D0 955 aa7.58□□□□□ -1.2
CSDE1-204ENST00000369530 TFIP11Q9UBB9 837 aaKnown RBP7.58□□□□□ -1.2
CSDE1-204ENST00000369530 CNPY2Q9Y2B0 182 aa7.58□□□□□ -1.2
CSDE1-204ENST00000369530 MRPL11Q9Y3B7 192 aaKnown RBP7.58□□□□□ -1.2
CSDE1-204ENST00000369530 EPOPA6NHQ4 379 aa7.58□□□□□ -1.2
CSDE1-204ENST00000369530 C22orf31O95567 290 aa7.58□□□□□ -1.2
CSDE1-204ENST00000369530 ARP10275 920 aa7.58□□□□□ -1.2
CSDE1-204ENST00000369530 SCG2P13521 617 aa7.58□□□□□ -1.2
CSDE1-204ENST00000369530 FSCN1Q16658 493 aaKnown RBP7.58□□□□□ -1.2
CSDE1-204ENST00000369530 NECAB2Q7Z6G3 386 aa7.58□□□□□ -1.2
CSDE1-204ENST00000369530 LUZP1Q86V48 1076 aa7.58□□□□□ -1.2
CSDE1-204ENST00000369530 CCDC50Q8IVM0 306 aa7.58□□□□□ -1.2
CSDE1-204ENST00000369530 NSUN6Q8TEA1 469 aaKnown RBP7.58□□□□□ -1.2
CSDE1-204ENST00000369530 BEGAINQ9BUH8 593 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms