RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 CCDC169A6NNP5 214 aa18.48■□□□□ 0.55
PHGDH-202ENST00000369409 TOMM70O94826 608 aa18.48■□□□□ 0.55
PHGDH-202ENST00000369409 GH1P01241 217 aa18.48■□□□□ 0.55
PHGDH-202ENST00000369409 SKILP12757 684 aa18.48■□□□□ 0.55
PHGDH-202ENST00000369409 ADKP55263 362 aaKnown RBP18.48■□□□□ 0.55
PHGDH-202ENST00000369409 VWA3BQ502W6 1294 aa18.48■□□□□ 0.55
PHGDH-202ENST00000369409 HAUS6Q7Z4H7 955 aa18.48■□□□□ 0.55
PHGDH-202ENST00000369409 PPFIBP1Q86W92 1011 aa18.48■□□□□ 0.55
PHGDH-202ENST00000369409 SYCP3Q8IZU3 236 aa18.48■□□□□ 0.55
PHGDH-202ENST00000369409 TC2NQ8N9U0 490 aa18.48■□□□□ 0.55
PHGDH-202ENST00000369409 FAM167AQ96KS9 214 aa18.48■□□□□ 0.55
PHGDH-202ENST00000369409 KIFC3Q9BVG8 833 aa18.48■□□□□ 0.55
PHGDH-202ENST00000369409 GBP3Q9H0R5 595 aa18.48■□□□□ 0.55
PHGDH-202ENST00000369409 NRBP2Q9NSY0 501 aa18.48■□□□□ 0.55
PHGDH-202ENST00000369409 ZHX1Q9UKY1 873 aaPredicted RBP18.48■□□□□ 0.55
PHGDH-202ENST00000369409 GYPCP04921 128 aa18.47■□□□□ 0.55
PHGDH-202ENST00000369409 RPL13P26373 211 aaKnown RBP18.47■□□□□ 0.55
PHGDH-202ENST00000369409 NPTX2P47972 431 aa18.47■□□□□ 0.55
PHGDH-202ENST00000369409 TM4SF4P48230 202 aa18.47■□□□□ 0.55
PHGDH-202ENST00000369409 MARSP56192 900 aaKnown RBP18.47■□□□□ 0.55
PHGDH-202ENST00000369409 RBL2Q08999 1139 aa18.47■□□□□ 0.55
PHGDH-202ENST00000369409 TBC1D8BQ0IIM8 1120 aa18.47■□□□□ 0.55
PHGDH-202ENST00000369409 FKBP15Q5T1M5 1219 aa18.47■□□□□ 0.55
PHGDH-202ENST00000369409 HS2ST1Q7LGA3 356 aa18.47■□□□□ 0.55
PHGDH-202ENST00000369409 KIAA1524Q8TCG1 905 aa18.47■□□□□ 0.55
PHGDH-202ENST00000369409 CPLX3Q8WVH0 158 aa18.47■□□□□ 0.55
PHGDH-202ENST00000369409 CEP89Q96ST8 783 aa18.47■□□□□ 0.55
PHGDH-202ENST00000369409 NDST4Q9H3R1 872 aa18.47■□□□□ 0.55
PHGDH-202ENST00000369409 ABHD16BQ9H3Z7 469 aa18.47■□□□□ 0.55
PHGDH-202ENST00000369409 ST6GALNAC4Q9H4F1 302 aa18.47■□□□□ 0.55
PHGDH-202ENST00000369409 DHX33Q9H6R0 707 aaKnown RBP18.47■□□□□ 0.55
PHGDH-202ENST00000369409 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.47■□□□□ 0.551e-6■□□□□ 10.9
PHGDH-202ENST00000369409 ZNF500O60304 480 aaPredicted RBP18.46■□□□□ 0.55
PHGDH-202ENST00000369409 ACVR2BQ13705 512 aa18.46■□□□□ 0.55
PHGDH-202ENST00000369409 TARBP2Q15633 366 aaKnown RBP18.46■□□□□ 0.55
PHGDH-202ENST00000369409 TRIM59Q8IWR1 403 aa18.46■□□□□ 0.55
PHGDH-202ENST00000369409 SLC17A8Q8NDX2 589 aa18.46■□□□□ 0.55
PHGDH-202ENST00000369409 SLC7A3Q8WY07 619 aa18.46■□□□□ 0.55
PHGDH-202ENST00000369409 ACCSQ96QU6 501 aa18.46■□□□□ 0.55
PHGDH-202ENST00000369409 C17orf75Q9HAS0 396 aa18.46■□□□□ 0.55
PHGDH-202ENST00000369409 KMT5AQ9NQR1 393 aa18.46■□□□□ 0.55
PHGDH-202ENST00000369409 AGPAT3Q9NRZ7 376 aa18.46■□□□□ 0.55
PHGDH-202ENST00000369409 AKR1B15C9JRZ8 316 aaPredicted RBP18.46■□□□□ 0.54
PHGDH-202ENST00000369409 CASP14P31944 242 aa18.46■□□□□ 0.54
PHGDH-202ENST00000369409 CASP4P49662 377 aa18.46■□□□□ 0.54
PHGDH-202ENST00000369409 SMTNP53814 917 aa18.46■□□□□ 0.54
PHGDH-202ENST00000369409 GTF2BQ00403 316 aa18.46■□□□□ 0.54
PHGDH-202ENST00000369409 LAMC2Q13753 1193 aa18.46■□□□□ 0.54
PHGDH-202ENST00000369409 SYCP1Q15431 976 aa18.46■□□□□ 0.54
PHGDH-202ENST00000369409 NFIL3Q16649 462 aa18.46■□□□□ 0.54
PHGDH-202ENST00000369409 PLPPR4Q7Z2D5 763 aa18.46■□□□□ 0.54
PHGDH-202ENST00000369409 MSL3Q8N5Y2 521 aaKnown RBP18.46■□□□□ 0.54
PHGDH-202ENST00000369409 TMEM161BQ8NDZ6 487 aa18.46■□□□□ 0.54
PHGDH-202ENST00000369409 BBXQ8WY36 941 aaPredicted RBP18.46■□□□□ 0.54
PHGDH-202ENST00000369409 TMEM206Q9H813 350 aa18.46■□□□□ 0.54
PHGDH-202ENST00000369409 ADGRA3Q8IWK6 1321 aa18.45■□□□□ 0.54
PHGDH-202ENST00000369409 TNPO2O14787 897 aaKnown RBP18.45■□□□□ 0.54
PHGDH-202ENST00000369409 SLC16A3O15427 465 aaKnown RBP18.45■□□□□ 0.54
PHGDH-202ENST00000369409 NRDCO43847 1150 aa18.45■□□□□ 0.54
PHGDH-202ENST00000369409 MFAP3LO75121 409 aa18.45■□□□□ 0.54
PHGDH-202ENST00000369409 AKAP3O75969 853 aa18.45■□□□□ 0.54
PHGDH-202ENST00000369409 TPM1P09493 284 aa18.45■□□□□ 0.54
PHGDH-202ENST00000369409 RFC5P40937 340 aa18.45■□□□□ 0.54
PHGDH-202ENST00000369409 KLK7P49862 253 aa18.45■□□□□ 0.54
PHGDH-202ENST00000369409 FXR1P51114 621 aaKnown RBP eCLIP18.45■□□□□ 0.546e-7■■■■□ 19.4
PHGDH-202ENST00000369409 RTP1P59025 263 aa18.45■□□□□ 0.54
PHGDH-202ENST00000369409 TRIM14Q14142 442 aa18.45■□□□□ 0.54
PHGDH-202ENST00000369409 PLCB4Q15147 1175 aa18.45■□□□□ 0.54
PHGDH-202ENST00000369409 GOLGA5Q8TBA6 731 aa18.45■□□□□ 0.54
PHGDH-202ENST00000369409 ATP8B4Q8TF62 1192 aa18.45■□□□□ 0.54
PHGDH-202ENST00000369409 SPIRE2Q8WWL2 714 aa18.45■□□□□ 0.54
PHGDH-202ENST00000369409 TMEM143Q96AN5 459 aa18.45■□□□□ 0.54
PHGDH-202ENST00000369409 SMARCAD1Q9H4L7 1026 aa18.45■□□□□ 0.54
PHGDH-202ENST00000369409 TISP43B9A030 160 aa18.44■□□□□ 0.54
PHGDH-202ENST00000369409 CA12O43570 354 aa18.44■□□□□ 0.54
PHGDH-202ENST00000369409 HOXC6P09630 235 aa18.44■□□□□ 0.54
PHGDH-202ENST00000369409 EPB41P11171 864 aaKnown RBP18.44■□□□□ 0.54
PHGDH-202ENST00000369409 CYP2J2P51589 502 aa18.44■□□□□ 0.54
PHGDH-202ENST00000369409 FRMD5Q7Z6J6 570 aa18.44■□□□□ 0.54
PHGDH-202ENST00000369409 CCDC112Q8NEF3 446 aa18.44■□□□□ 0.54
PHGDH-202ENST00000369409 PPTC7Q8NI37 304 aa18.44■□□□□ 0.54
PHGDH-202ENST00000369409 AFG1LQ8WV93 481 aa18.44■□□□□ 0.54
PHGDH-202ENST00000369409 USP6NLQ92738 828 aa18.44■□□□□ 0.54
PHGDH-202ENST00000369409 EMID1Q96A84 441 aaPredicted RBP18.44■□□□□ 0.54
PHGDH-202ENST00000369409 IFT74Q96LB3 600 aa18.44■□□□□ 0.54
PHGDH-202ENST00000369409 ERGIC2Q96RQ1 377 aa18.44■□□□□ 0.54
PHGDH-202ENST00000369409 FLRT1Q9NZU1 646 aa18.44■□□□□ 0.54
PHGDH-202ENST00000369409 ARMCX3Q9UH62 379 aaPredicted RBP18.44■□□□□ 0.54
PHGDH-202ENST00000369409 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.44■□□□□ 0.54
PHGDH-202ENST00000369409 DENND3A2RUS2 1198 aa18.43■□□□□ 0.54
PHGDH-202ENST00000369409 SMPD1P17405 629 aa18.43■□□□□ 0.54
PHGDH-202ENST00000369409 CYP2B6P20813 491 aa18.43■□□□□ 0.54
PHGDH-202ENST00000369409 CCL14Q16627 93 aa18.43■□□□□ 0.54
PHGDH-202ENST00000369409 SOCS4Q8WXH5 440 aa18.43■□□□□ 0.54
PHGDH-202ENST00000369409 HVCN1Q96D96 273 aa18.43■□□□□ 0.54
PHGDH-202ENST00000369409 PCMTD1Q96MG8 357 aaPredicted RBP18.43■□□□□ 0.54
PHGDH-202ENST00000369409 TRPC6Q9Y210 931 aa18.43■□□□□ 0.54
PHGDH-202ENST00000369409 EVPLQ92817 2033 aa18.43■□□□□ 0.54
PHGDH-202ENST00000369409 ADCY6O43306 1168 aa18.43■□□□□ 0.54
PHGDH-202ENST00000369409 LGALS2P05162 132 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 378.8 ms