RNA–Protein interactions for RNA: ENST00000369071.4

LINC01561-201, Transcript of long intergenic non-protein coding RNA 1561, humanhuman

BASIC

Gene LINC01561, Length 2,176 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561-201ENST00000369071 TRIM31Q9BZY9 425 aa13.65□□□□□ -0.22
LINC01561-201ENST00000369071 NUDT17P0C025 328 aa13.64□□□□□ -0.23
LINC01561-201ENST00000369071 DR1Q01658 176 aa13.64□□□□□ -0.23
LINC01561-201ENST00000369071 KLRC3Q07444 240 aa13.64□□□□□ -0.23
LINC01561-201ENST00000369071 IFFO1Q0D2I5 559 aa13.64□□□□□ -0.23
LINC01561-201ENST00000369071 AP3B2Q13367 1082 aa13.64□□□□□ -0.23
LINC01561-201ENST00000369071 PREPLQ4J6C6 727 aaPredicted RBP13.64□□□□□ -0.23
LINC01561-201ENST00000369071 CYB5D1Q6P9G0 228 aa13.64□□□□□ -0.23
LINC01561-201ENST00000369071 ERP44Q9BS26 406 aa13.64□□□□□ -0.23
LINC01561-201ENST00000369071 RUSC1Q9BVN2 902 aa13.64□□□□□ -0.23
LINC01561-201ENST00000369071 STK33Q9BYT3 514 aa13.64□□□□□ -0.23
LINC01561-201ENST00000369071 FAM129AQ9BZQ8 928 aa13.64□□□□□ -0.23
LINC01561-201ENST00000369071 GPR88Q9GZN0 384 aa13.64□□□□□ -0.23
LINC01561-201ENST00000369071 CARD9Q9H257 536 aa13.64□□□□□ -0.23
LINC01561-201ENST00000369071 KDM4CQ9H3R0 1056 aa13.64□□□□□ -0.23
LINC01561-201ENST00000369071 CXorf56Q9H5V9 222 aa13.64□□□□□ -0.23
LINC01561-201ENST00000369071 ERVK-5Q9HDB9 667 aa13.64□□□□□ -0.23
LINC01561-201ENST00000369071 POLLQ9UGP5 575 aa13.64□□□□□ -0.23
LINC01561-201ENST00000369071 PCDHB13Q9Y5F0 798 aa13.64□□□□□ -0.23
LINC01561-201ENST00000369071 ZMYM2Q9UBW7 1377 aa13.64□□□□□ -0.23
LINC01561-201ENST00000369071 GCNT3O95395 438 aa13.64□□□□□ -0.23
LINC01561-201ENST00000369071 SHBGP04278 402 aa13.64□□□□□ -0.23
LINC01561-201ENST00000369071 GHRP10912 638 aa13.64□□□□□ -0.23
LINC01561-201ENST00000369071 PPP2R5EQ16537 467 aa13.64□□□□□ -0.23
LINC01561-201ENST00000369071 WLSQ5T9L3 541 aa13.64□□□□□ -0.23
LINC01561-201ENST00000369071 CPLX4Q7Z7G2 160 aa13.64□□□□□ -0.23
LINC01561-201ENST00000369071 FAM228AQ86W67 206 aa13.64□□□□□ -0.23
LINC01561-201ENST00000369071 PARP9Q8IXQ6 854 aa13.64□□□□□ -0.23
LINC01561-201ENST00000369071 RPGRQ92834 1020 aaKnown RBP13.64□□□□□ -0.23
LINC01561-201ENST00000369071 CHMP6Q96FZ7 201 aa13.64□□□□□ -0.23
LINC01561-201ENST00000369071 SGSM3Q96HU1 749 aa13.64□□□□□ -0.23
LINC01561-201ENST00000369071 HAUS2Q9NVX0 235 aa13.64□□□□□ -0.23
LINC01561-201ENST00000369071 PNMA2Q9UL42 364 aa13.64□□□□□ -0.23
LINC01561-201ENST00000369071 FAM187AA6NFU0 413 aa13.63□□□□□ -0.23
LINC01561-201ENST00000369071 POLD1P28340 1107 aa13.63□□□□□ -0.23
LINC01561-201ENST00000369071 COPB2P35606 906 aa13.63□□□□□ -0.23
LINC01561-201ENST00000369071 CDR1P51861 262 aa13.63□□□□□ -0.23
LINC01561-201ENST00000369071 XRCC4Q13426 336 aa13.63□□□□□ -0.23
LINC01561-201ENST00000369071 DRAP1Q14919 205 aaPredicted RBP13.63□□□□□ -0.23
LINC01561-201ENST00000369071 NFIL3Q16649 462 aa13.63□□□□□ -0.23
LINC01561-201ENST00000369071 CRY2Q49AN0 593 aa13.63□□□□□ -0.23
LINC01561-201ENST00000369071 ZDHHC24Q6UX98 284 aa13.63□□□□□ -0.23
LINC01561-201ENST00000369071 TAX1BP1Q86VP1 789 aa13.63□□□□□ -0.23
LINC01561-201ENST00000369071 HOOK3Q86VS8 718 aa13.63□□□□□ -0.23
LINC01561-201ENST00000369071 TBC1D16Q8TBP0 767 aa13.63□□□□□ -0.23
LINC01561-201ENST00000369071 ARHGEF26Q96DR7 871 aa13.63□□□□□ -0.23
LINC01561-201ENST00000369071 PGM2Q96G03 612 aa13.63□□□□□ -0.23
LINC01561-201ENST00000369071 ZNF317Q96PQ6 595 aaPredicted RBP13.63□□□□□ -0.23
LINC01561-201ENST00000369071 BHMT2Q9H2M3 363 aa13.63□□□□□ -0.23
LINC01561-201ENST00000369071 PABPC3Q9H361 631 aaKnown RBP13.63□□□□□ -0.23
LINC01561-201ENST00000369071 OLFML3Q9NRN5 406 aa13.63□□□□□ -0.23
LINC01561-201ENST00000369071 DNAJC12Q9UKB3 198 aa13.63□□□□□ -0.23
LINC01561-201ENST00000369071 DAAM1Q9Y4D1 1078 aa13.63□□□□□ -0.23
LINC01561-201ENST00000369071 STK24Q9Y6E0 443 aa13.63□□□□□ -0.23
LINC01561-201ENST00000369071 SPDYE3A6NKU9 549 aa13.62□□□□□ -0.23
LINC01561-201ENST00000369071 FAM86B1E9PN63 330 aa13.62□□□□□ -0.23
LINC01561-201ENST00000369071 MPHOSPH10O00566 681 aaKnown RBP13.62□□□□□ -0.23
LINC01561-201ENST00000369071 DNAJC8O75937 253 aaPredicted RBP13.62□□□□□ -0.23
LINC01561-201ENST00000369071 EYA4O95677 639 aa13.62□□□□□ -0.23
LINC01561-201ENST00000369071 FAM86B2P0C5J1 330 aa13.62□□□□□ -0.23
LINC01561-201ENST00000369071 PMS2P54278 862 aa13.62□□□□□ -0.23
LINC01561-201ENST00000369071 DRG2P55039 364 aaKnown RBP13.62□□□□□ -0.23
LINC01561-201ENST00000369071 SNCBQ16143 134 aa13.62□□□□□ -0.23
LINC01561-201ENST00000369071 PRR5LQ6MZQ0 368 aa13.62□□□□□ -0.23
LINC01561-201ENST00000369071 FAM186BQ8IYM0 893 aa13.62□□□□□ -0.23
LINC01561-201ENST00000369071 MAGEC3Q8TD91 643 aa13.62□□□□□ -0.23
LINC01561-201ENST00000369071 CTNNBL1Q8WYA6 563 aaPredicted RBP13.62□□□□□ -0.23
LINC01561-201ENST00000369071 GLG1Q92896 1179 aa13.62□□□□□ -0.23
LINC01561-201ENST00000369071 RNF25Q96BH1 459 aaPredicted RBP13.62□□□□□ -0.23
LINC01561-201ENST00000369071 HVCN1Q96D96 273 aa13.62□□□□□ -0.23
LINC01561-201ENST00000369071 FAM20AQ96MK3 541 aa13.62□□□□□ -0.23
LINC01561-201ENST00000369071 NAP1L3Q99457 506 aaPredicted RBP13.62□□□□□ -0.23
LINC01561-201ENST00000369071 TACO1Q9BSH4 297 aaKnown RBP13.62□□□□□ -0.23
LINC01561-201ENST00000369071 IKZF4Q9H2S9 585 aa13.62□□□□□ -0.23
LINC01561-201ENST00000369071 ADAM7Q9H2U9 754 aa13.62□□□□□ -0.23
LINC01561-201ENST00000369071 MCM8Q9UJA3 840 aa13.62□□□□□ -0.23
LINC01561-201ENST00000369071 CCNL1Q9UK58 526 aaPredicted RBP13.62□□□□□ -0.23
LINC01561-201ENST00000369071 VAV3Q9UKW4 847 aa13.62□□□□□ -0.23
LINC01561-201ENST00000369071 FRMPD4Q14CM0 1322 aa13.62□□□□□ -0.23
LINC01561-201ENST00000369071 KIAA0391O15091 583 aaKnown RBP13.62□□□□□ -0.23
LINC01561-201ENST00000369071 EIF3DO15371 548 aaKnown RBP eCLIP13.62□□□□□ -0.23
LINC01561-201ENST00000369071 TBCAO75347 108 aaKnown RBP13.62□□□□□ -0.23
LINC01561-201ENST00000369071 CCDC172P0C7W6 258 aa13.62□□□□□ -0.23
LINC01561-201ENST00000369071 ABCB4P21439 1286 aa13.62□□□□□ -0.23
LINC01561-201ENST00000369071 RDXP35241 583 aaKnown RBP13.62□□□□□ -0.23
LINC01561-201ENST00000369071 PSMC2P35998 433 aaKnown RBP13.62□□□□□ -0.23
LINC01561-201ENST00000369071 MMP13P45452 471 aa13.62□□□□□ -0.23
LINC01561-201ENST00000369071 FMO5P49326 533 aa13.62□□□□□ -0.23
LINC01561-201ENST00000369071 GTF2IP78347 998 aa13.62□□□□□ -0.23
LINC01561-201ENST00000369071 PRPF4BQ13523 1007 aaKnown RBP13.62□□□□□ -0.23
LINC01561-201ENST00000369071 DHX34Q14147 1143 aaKnown RBP13.62□□□□□ -0.23
LINC01561-201ENST00000369071 FAM98CQ17RN3 349 aaKnown RBP13.62□□□□□ -0.23
LINC01561-201ENST00000369071 KIAA1755Q5JYT7 1200 aa13.62□□□□□ -0.23
LINC01561-201ENST00000369071 CHADLQ6NUI6 762 aa13.62□□□□□ -0.23
LINC01561-201ENST00000369071 ADAT2Q7Z6V5 191 aaKnown RBP13.62□□□□□ -0.23
LINC01561-201ENST00000369071 JAMLQ86YT9 394 aa13.62□□□□□ -0.23
LINC01561-201ENST00000369071 ATXN2LQ8WWM7 1075 aaKnown RBP13.62□□□□□ -0.23
LINC01561-201ENST00000369071 ALG3Q92685 438 aa13.62□□□□□ -0.23
LINC01561-201ENST00000369071 POLR3CQ9BUI4 534 aaPredicted RBP13.62□□□□□ -0.23
LINC01561-201ENST00000369071 COG5Q9UP83 839 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms