RNA–Protein interactions for RNA: ENST00000368908.9

LYSMD1-201, Transcript of LysM domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD1, Length 2,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-201ENST00000368908 GOLPH3Q9H4A6 298 aa11.4□□□□□ -0.59
LYSMD1-201ENST00000368908 SMCO2A6NFE2 343 aa11.39□□□□□ -0.59
LYSMD1-201ENST00000368908 E7ENQ6 273 aa11.39□□□□□ -0.59
LYSMD1-201ENST00000368908 hCG_1984214I3L0E3 225 aa11.39□□□□□ -0.59
LYSMD1-201ENST00000368908 DDX3YO15523 660 aaKnown RBP11.39□□□□□ -0.59
LYSMD1-201ENST00000368908 CYP2D6P10635 497 aa11.39□□□□□ -0.59
LYSMD1-201ENST00000368908 UCHL3P15374 230 aa11.39□□□□□ -0.59
LYSMD1-201ENST00000368908 ATP2A2P16615 1042 aaKnown RBP11.39□□□□□ -0.59
LYSMD1-201ENST00000368908 HSPA6P17066 643 aa11.39□□□□□ -0.59
LYSMD1-201ENST00000368908 ATP11AP98196 1134 aa11.39□□□□□ -0.59
LYSMD1-201ENST00000368908 BIRC2Q13490 618 aa11.39□□□□□ -0.59
LYSMD1-201ENST00000368908 RBBP5Q15291 538 aaKnown RBP11.39□□□□□ -0.59
LYSMD1-201ENST00000368908 KIAA1755Q5JYT7 1200 aa11.39□□□□□ -0.59
LYSMD1-201ENST00000368908 ZDHHC24Q6UX98 284 aa11.39□□□□□ -0.59
LYSMD1-201ENST00000368908 ZNF713Q8N859 430 aaPredicted RBP11.39□□□□□ -0.59
LYSMD1-201ENST00000368908 PROCA1Q8NCQ7 364 aaPredicted RBP11.39□□□□□ -0.59
LYSMD1-201ENST00000368908 MICAL1Q8TDZ2 1067 aa11.39□□□□□ -0.59
LYSMD1-201ENST00000368908 SNX29Q8TEQ0 813 aa11.39□□□□□ -0.59
LYSMD1-201ENST00000368908 KLHL29Q96CT2 875 aa11.39□□□□□ -0.59
LYSMD1-201ENST00000368908 ROPN1BQ9BZX4 212 aaPredicted RBP11.39□□□□□ -0.59
LYSMD1-201ENST00000368908 KCTD10Q9H3F6 313 aa11.39□□□□□ -0.59
LYSMD1-201ENST00000368908 ROPN1Q9HAT0 212 aaPredicted RBP11.39□□□□□ -0.59
LYSMD1-201ENST00000368908 TNRC6CQ9HCJ0 1690 aaKnown RBP11.39□□□□□ -0.59
LYSMD1-201ENST00000368908 SPDYE3A6NKU9 549 aa11.38□□□□□ -0.59
LYSMD1-201ENST00000368908 KIAA0391O15091 583 aaKnown RBP11.38□□□□□ -0.59
LYSMD1-201ENST00000368908 SNUPNO95149 360 aaKnown RBP11.38□□□□□ -0.59
LYSMD1-201ENST00000368908 FGGP02679 453 aa11.38□□□□□ -0.59
LYSMD1-201ENST00000368908 MSH2P43246 934 aa11.38□□□□□ -0.59
LYSMD1-201ENST00000368908 CCDC15Q0P6D6 951 aa11.38□□□□□ -0.59
LYSMD1-201ENST00000368908 KCNH2Q12809 1159 aa11.38□□□□□ -0.59
LYSMD1-201ENST00000368908 PARP10Q53GL7 1025 aa11.38□□□□□ -0.59
LYSMD1-201ENST00000368908 ANKRD20A2Q5SQ80 823 aa11.38□□□□□ -0.59
LYSMD1-201ENST00000368908 HYIQ5T013 277 aa11.38□□□□□ -0.59
LYSMD1-201ENST00000368908 ANKRD20A1Q5TYW2 823 aa11.38□□□□□ -0.59
LYSMD1-201ENST00000368908 ANKRD20A3Q5VUR7 823 aa11.38□□□□□ -0.59
LYSMD1-201ENST00000368908 SUSD4Q5VX71 490 aa11.38□□□□□ -0.59
LYSMD1-201ENST00000368908 FRMD5Q7Z6J6 570 aa11.38□□□□□ -0.59
LYSMD1-201ENST00000368908 RXFP1Q9HBX9 757 aa11.38□□□□□ -0.59
LYSMD1-201ENST00000368908 ZFATQ9P243 1243 aa11.38□□□□□ -0.59
LYSMD1-201ENST00000368908 ARL2BPQ9Y2Y0 163 aa11.38□□□□□ -0.59
LYSMD1-201ENST00000368908 PCDHA2Q9Y5H9 948 aa11.38□□□□□ -0.59
LYSMD1-201ENST00000368908 RPTORQ8N122 1335 aa11.38□□□□□ -0.59
LYSMD1-201ENST00000368908 KRT16P08779 473 aa11.38□□□□□ -0.59
LYSMD1-201ENST00000368908 CCNB1P14635 433 aa11.38□□□□□ -0.59
LYSMD1-201ENST00000368908 GYG1P46976 350 aa11.38□□□□□ -0.59
LYSMD1-201ENST00000368908 JAM2P57087 298 aa11.38□□□□□ -0.59
LYSMD1-201ENST00000368908 IFI35P80217 286 aaPredicted RBP11.38□□□□□ -0.59
LYSMD1-201ENST00000368908 MKRN3Q13064 507 aaKnown RBP11.38□□□□□ -0.59
LYSMD1-201ENST00000368908 MAPK7Q13164 816 aa11.38□□□□□ -0.59
LYSMD1-201ENST00000368908 CAVIN4Q5BKX8 364 aa11.38□□□□□ -0.59
LYSMD1-201ENST00000368908 SOGA3Q5TF21 947 aa11.38□□□□□ -0.59
LYSMD1-201ENST00000368908 ERICH1Q86X53 443 aa11.38□□□□□ -0.59
LYSMD1-201ENST00000368908 JAMLQ86YT9 394 aa11.38□□□□□ -0.59
LYSMD1-201ENST00000368908 CCDC65Q8IXS2 484 aa11.38□□□□□ -0.59
LYSMD1-201ENST00000368908 REXO1Q8N1G1 1221 aaKnown RBP11.38□□□□□ -0.59
LYSMD1-201ENST00000368908 ETAA1Q9NY74 926 aa11.38□□□□□ -0.59
LYSMD1-201ENST00000368908 ADAM22Q9P0K1 906 aa11.38□□□□□ -0.59
LYSMD1-201ENST00000368908 CTNNAL1Q9UBT7 734 aa11.38□□□□□ -0.59
LYSMD1-201ENST00000368908 MTRF1LQ9UGC7 380 aaKnown RBP11.38□□□□□ -0.59
LYSMD1-201ENST00000368908 KDM3AQ9Y4C1 1321 aa11.38□□□□□ -0.59
LYSMD1-201ENST00000368908 COL4A1P02462 1669 aa11.38□□□□□ -0.59
LYSMD1-201ENST00000368908 EME2A4GXA9 379 aaPredicted RBP11.37□□□□□ -0.59
LYSMD1-201ENST00000368908 CETN3O15182 167 aa11.37□□□□□ -0.59
LYSMD1-201ENST00000368908 ENOX2Q16206 610 aaKnown RBP11.37□□□□□ -0.59
LYSMD1-201ENST00000368908 KCNK18Q7Z418 384 aa11.37□□□□□ -0.59
LYSMD1-201ENST00000368908 RFFLQ8WZ73 363 aa11.37□□□□□ -0.59
LYSMD1-201ENST00000368908 RUNDC3BQ96NL0 473 aa11.37□□□□□ -0.59
LYSMD1-201ENST00000368908 RAB3IPQ96QF0 476 aaPredicted RBP11.37□□□□□ -0.59
LYSMD1-201ENST00000368908 TRIM7Q9C029 511 aa11.37□□□□□ -0.59
LYSMD1-201ENST00000368908 MTFR1LQ9H019 292 aa11.37□□□□□ -0.59
LYSMD1-201ENST00000368908 BMP2KQ9NSY1 1161 aaPredicted RBP11.37□□□□□ -0.59
LYSMD1-201ENST00000368908 GRHL1Q9NZI5 618 aa11.37□□□□□ -0.59
LYSMD1-201ENST00000368908 NARFQ9UHQ1 456 aa11.37□□□□□ -0.59
LYSMD1-201ENST00000368908 HDAC9Q9UKV0 1011 aa11.37□□□□□ -0.59
LYSMD1-201ENST00000368908 C10orf71Q711Q0 1435 aa11.37□□□□□ -0.59
LYSMD1-201ENST00000368908 AFPP02771 609 aaKnown RBP11.37□□□□□ -0.59
LYSMD1-201ENST00000368908 LINGO3P0C6S8 592 aa11.37□□□□□ -0.59
LYSMD1-201ENST00000368908 TMEM253P0C7T8 217 aa11.37□□□□□ -0.59
LYSMD1-201ENST00000368908 FERP16591 822 aa11.37□□□□□ -0.59
LYSMD1-201ENST00000368908 MECOMQ03112 1051 aa11.37□□□□□ -0.59
LYSMD1-201ENST00000368908 PPATQ06203 517 aa11.37□□□□□ -0.59
LYSMD1-201ENST00000368908 AUHQ13825 339 aaKnown RBP11.37□□□□□ -0.59
LYSMD1-201ENST00000368908 SLC29A2Q14542 456 aa11.37□□□□□ -0.59
LYSMD1-201ENST00000368908 DIXDC1Q155Q3 683 aa11.37□□□□□ -0.59
LYSMD1-201ENST00000368908 C12orf60Q5U649 245 aa11.37□□□□□ -0.59
LYSMD1-201ENST00000368908 RNF43Q68DV7 783 aa11.37□□□□□ -0.59
LYSMD1-201ENST00000368908 ARHGEF1Q92888 912 aaKnown RBP11.37□□□□□ -0.59
LYSMD1-201ENST00000368908 TRIM31Q9BZY9 425 aa11.37□□□□□ -0.59
LYSMD1-201ENST00000368908 GOPCQ9HD26 462 aa11.37□□□□□ -0.59
LYSMD1-201ENST00000368908 PRKAG3Q9UGI9 489 aa11.37□□□□□ -0.59
LYSMD1-201ENST00000368908 KCNG1Q9UIX4 513 aa11.37□□□□□ -0.59
LYSMD1-201ENST00000368908 TLDC2A0PJX2 215 aa11.36□□□□□ -0.59
LYSMD1-201ENST00000368908 KLRF2D3W0D1 207 aa11.36□□□□□ -0.59
LYSMD1-201ENST00000368908 DDX3XO00571 662 aaKnown RBP eCLIP11.36□□□□□ -0.59
LYSMD1-201ENST00000368908 PODXLO00592 558 aa11.36□□□□□ -0.59
LYSMD1-201ENST00000368908 RASGRF2O14827 1237 aa11.36□□□□□ -0.59
LYSMD1-201ENST00000368908 PHF2O75151 1096 aa11.36□□□□□ -0.59
LYSMD1-201ENST00000368908 NEFHP12036 1026 aa11.36□□□□□ -0.59
LYSMD1-201ENST00000368908 PECAM1P16284 738 aaPredicted RBP11.36□□□□□ -0.59
LYSMD1-201ENST00000368908 PON1P27169 355 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms