RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 NUMBP49757 651 aa19.42■□□□□ 0.7
SNX27-202ENST00000368841 CRLF3Q8IUI8 442 aa19.42■□□□□ 0.7
SNX27-202ENST00000368841 ARL8AQ96BM9 186 aa19.42■□□□□ 0.7
SNX27-202ENST00000368841 ATP6V0A4Q9HBG4 840 aa19.42■□□□□ 0.7
SNX27-202ENST00000368841 FAM135BQ49AJ0 1406 aa19.42■□□□□ 0.7
SNX27-202ENST00000368841 PRPF3O43395 683 aaKnown RBP19.41■□□□□ 0.7
SNX27-202ENST00000368841 ECE2O60344 883 aa19.41■□□□□ 0.7
SNX27-202ENST00000368841 PDHA1P08559 390 aa19.41■□□□□ 0.7
SNX27-202ENST00000368841 BEND6Q5SZJ8 279 aaPredicted RBP19.41■□□□□ 0.7
SNX27-202ENST00000368841 CNOT8Q9UFF9 292 aaKnown RBP19.41■□□□□ 0.7
SNX27-202ENST00000368841 SRPRBQ9Y5M8 271 aaKnown RBP19.41■□□□□ 0.7
SNX27-202ENST00000368841 SERPIND1P05546 499 aa19.41■□□□□ 0.7
SNX27-202ENST00000368841 TAC1P20366 129 aa19.41■□□□□ 0.7
SNX27-202ENST00000368841 TAF1BQ53T94 588 aaPredicted RBP19.41■□□□□ 0.7
SNX27-202ENST00000368841 FASTKD5Q7L8L6 764 aaKnown RBP19.41■□□□□ 0.7
SNX27-202ENST00000368841 EGFL8Q99944 293 aa19.41■□□□□ 0.7
SNX27-202ENST00000368841 UBE4BO95155 1302 aa19.41■□□□□ 0.7
SNX27-202ENST00000368841 KIF24Q5T7B8 1368 aa19.41■□□□□ 0.7
SNX27-202ENST00000368841 COPEO14579 308 aa19.41■□□□□ 0.7
SNX27-202ENST00000368841 SLFN14P0C7P3 912 aa19.41■□□□□ 0.7
SNX27-202ENST00000368841 IL6STP40189 918 aaPredicted RBP19.41■□□□□ 0.7
SNX27-202ENST00000368841 ESRRGP62508 458 aa19.41■□□□□ 0.7
SNX27-202ENST00000368841 TEKT2Q9UIF3 430 aa19.41■□□□□ 0.7
SNX27-202ENST00000368841 DNMT1P26358 1616 aaKnown RBP19.41■□□□□ 0.7
SNX27-202ENST00000368841 ZSCAN9O15535 394 aaPredicted RBP19.41■□□□□ 0.7
SNX27-202ENST00000368841 KPNA2P52292 529 aaKnown RBP19.41■□□□□ 0.7
SNX27-202ENST00000368841 RWDD2BP57060 319 aa19.41■□□□□ 0.7
SNX27-202ENST00000368841 PIGBQ92521 554 aa19.41■□□□□ 0.7
SNX27-202ENST00000368841 C11orf70Q9BRQ4 267 aa19.41■□□□□ 0.7
SNX27-202ENST00000368841 CASS4Q9NQ75 786 aa19.41■□□□□ 0.7
SNX27-202ENST00000368841 LRRC14Q15048 493 aa19.41■□□□□ 0.7
SNX27-202ENST00000368841 PBXIP1Q96AQ6 731 aa19.41■□□□□ 0.7
SNX27-202ENST00000368841 OTUD5Q96G74 571 aa19.41■□□□□ 0.7
SNX27-202ENST00000368841 ADAM22Q9P0K1 906 aa19.41■□□□□ 0.7
SNX27-202ENST00000368841 POTEB3A0JP26 581 aa19.41■□□□□ 0.7
SNX27-202ENST00000368841 POTECB2RU33 542 aa19.41■□□□□ 0.7
SNX27-202ENST00000368841 TJP3O95049 919 aa19.41■□□□□ 0.7
SNX27-202ENST00000368841 OCM2P0CE71 109 aa19.41■□□□□ 0.7
SNX27-202ENST00000368841 OCMP0CE72 109 aaPredicted RBP19.41■□□□□ 0.7
SNX27-202ENST00000368841 IRF1P10914 325 aa19.41■□□□□ 0.7
SNX27-202ENST00000368841 POTEBQ6S5H4 581 aa19.41■□□□□ 0.7
SNX27-202ENST00000368841 NEK9Q8TD19 979 aa19.41■□□□□ 0.7
SNX27-202ENST00000368841 CCDC124Q96CT7 223 aaKnown RBP19.41■□□□□ 0.7
SNX27-202ENST00000368841 NUP85Q9BW27 656 aa19.41■□□□□ 0.7
SNX27-202ENST00000368841 RECQLP46063 649 aaPredicted RBP19.4■□□□□ 0.7
SNX27-202ENST00000368841 ARHGEF6Q15052 776 aa19.4■□□□□ 0.7
SNX27-202ENST00000368841 ZC3H18Q86VM9 953 aaKnown RBP19.4■□□□□ 0.7
SNX27-202ENST00000368841 CEP70Q8NHQ1 597 aa19.4■□□□□ 0.7
SNX27-202ENST00000368841 SH3KBP1Q96B97 665 aa19.4■□□□□ 0.7
SNX27-202ENST00000368841 EFHD1Q9BUP0 239 aa19.4■□□□□ 0.7
SNX27-202ENST00000368841 STRIP2Q9ULQ0 834 aa19.4■□□□□ 0.7
SNX27-202ENST00000368841 PEG3Q9GZU2 1588 aa19.4■□□□□ 0.7
SNX27-202ENST00000368841 E2F4Q16254 413 aa19.4■□□□□ 0.7
SNX27-202ENST00000368841 TBC1D10CQ8IV04 446 aa19.4■□□□□ 0.7
SNX27-202ENST00000368841 TDRD7Q8NHU6 1098 aaKnown RBP19.4■□□□□ 0.7
SNX27-202ENST00000368841 POTEFA5A3E0 1075 aa19.4■□□□□ 0.7
SNX27-202ENST00000368841 POTEIP0CG38 1075 aa19.4■□□□□ 0.7
SNX27-202ENST00000368841 POTEGQ6S5H5 508 aa19.4■□□□□ 0.7
SNX27-202ENST00000368841 POTEEQ6S8J3 1075 aa19.4■□□□□ 0.7
SNX27-202ENST00000368841 CATSPER3Q86XQ3 398 aa19.4■□□□□ 0.7
SNX27-202ENST00000368841 KLC2Q9H0B6 622 aa19.4■□□□□ 0.7
SNX27-202ENST00000368841 A0A1W2PQ27 194 aa19.4■□□□□ 0.7
SNX27-202ENST00000368841 A0A1W2PQ64 194 aa19.4■□□□□ 0.7
SNX27-202ENST00000368841 A0A1W2PQD8 194 aa19.4■□□□□ 0.7
SNX27-202ENST00000368841 PP2D1A8MPX8 630 aa19.4■□□□□ 0.7
SNX27-202ENST00000368841 GRAPQ13588 217 aa19.4■□□□□ 0.7
SNX27-202ENST00000368841 GRAPLQ8TC17 118 aaPredicted RBP19.4■□□□□ 0.7
SNX27-202ENST00000368841 CYP4F11Q9HBI6 524 aa19.4■□□□□ 0.7
SNX27-202ENST00000368841 FAM217BQ9NTX9 383 aaPredicted RBP19.4■□□□□ 0.7
SNX27-202ENST00000368841 TXLNGQ9NUQ3 528 aa19.4■□□□□ 0.7
SNX27-202ENST00000368841 ZC3H12BQ5HYM0 836 aaKnown RBP19.4■□□□□ 0.7
SNX27-202ENST00000368841 ANKRD40Q6AI12 368 aa19.4■□□□□ 0.7
SNX27-202ENST00000368841 GLYCTKQ8IVS8 523 aa19.4■□□□□ 0.7
SNX27-202ENST00000368841 MMP19Q99542 508 aa19.4■□□□□ 0.7
SNX27-202ENST00000368841 COPRSQ9NQ92 184 aa19.4■□□□□ 0.7
SNX27-202ENST00000368841 LZICQ8WZA0 190 aa19.39■□□□□ 0.7
SNX27-202ENST00000368841 PLEKHF1Q96S99 279 aa19.39■□□□□ 0.7
SNX27-202ENST00000368841 FAM95CA0A1B0GW59 222 aa19.39■□□□□ 0.69
SNX27-202ENST00000368841 PCP11498 1178 aaKnown RBP19.39■□□□□ 0.69
SNX27-202ENST00000368841 CLCN6P51797 869 aa19.39■□□□□ 0.69
SNX27-202ENST00000368841 DDX53Q86TM3 631 aaKnown RBP19.39■□□□□ 0.69
SNX27-202ENST00000368841 NUDCD3Q8IVD9 361 aa19.39■□□□□ 0.69
SNX27-202ENST00000368841 TAGAPQ8N103 731 aa19.39■□□□□ 0.69
SNX27-202ENST00000368841 DRC3Q9H069 523 aa19.39■□□□□ 0.69
SNX27-202ENST00000368841 SP110Q9HB58 689 aa19.39■□□□□ 0.69
SNX27-202ENST00000368841 ZNF302Q9NR11 478 aa19.39■□□□□ 0.69
SNX27-202ENST00000368841 DIAPH2O60879 1101 aa19.39■□□□□ 0.69
SNX27-202ENST00000368841 DNAJC6O75061 913 aa19.39■□□□□ 0.69
SNX27-202ENST00000368841 HMBSP08397 361 aa19.39■□□□□ 0.69
SNX27-202ENST00000368841 GCFC2P16383 781 aaKnown RBP19.39■□□□□ 0.69
SNX27-202ENST00000368841 SEPT2Q15019 361 aa19.39■□□□□ 0.69
SNX27-202ENST00000368841 VSTM4Q8IW00 320 aa19.39■□□□□ 0.69
SNX27-202ENST00000368841 TTLL11Q8NHH1 800 aa19.39■□□□□ 0.69
SNX27-202ENST00000368841 SPATS2Q86XZ4 545 aaKnown RBP19.39■□□□□ 0.69
SNX27-202ENST00000368841 SEPT8Q92599 483 aa19.39■□□□□ 0.69
SNX27-202ENST00000368841 ZBTB18Q99592 522 aa19.39■□□□□ 0.69
SNX27-202ENST00000368841 SH2D3AQ9BRG2 576 aa19.39■□□□□ 0.69
SNX27-202ENST00000368841 NEUROG2Q9H2A3 272 aa19.39■□□□□ 0.69
SNX27-202ENST00000368841 PHLPP2Q6ZVD8 1323 aa19.39■□□□□ 0.69
SNX27-202ENST00000368841 PRDX5P30044 214 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms