RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 TRAF1Q13077 416 aa9.86□□□□□ -0.83
TPM3-213ENST00000368545 EARS2Q5JPH6 523 aaKnown RBP9.86□□□□□ -0.83
TPM3-213ENST00000368545 TTBK2Q6IQ55 1244 aa9.86□□□□□ -0.83
TPM3-213ENST00000368545 RBM43Q6ZSC3 357 aaKnown RBP9.86□□□□□ -0.83
TPM3-213ENST00000368545 GAS2L3Q86XJ1 694 aa9.86□□□□□ -0.83
TPM3-213ENST00000368545 REXO1Q8N1G1 1221 aaKnown RBP9.86□□□□□ -0.83
TPM3-213ENST00000368545 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.86□□□□□ -0.83
TPM3-213ENST00000368545 FBXO27Q8NI29 283 aa9.86□□□□□ -0.83
TPM3-213ENST00000368545 FERMT2Q96AC1 680 aa9.86□□□□□ -0.83
TPM3-213ENST00000368545 ZNF341Q9BYN7 854 aa9.86□□□□□ -0.83
TPM3-213ENST00000368545 TSPY26PQ9H489 355 aa9.86□□□□□ -0.83
TPM3-213ENST00000368545 GOLPH3LQ9H4A5 285 aa9.86□□□□□ -0.83
TPM3-213ENST00000368545 VCPKMTQ9H867 229 aa9.86□□□□□ -0.83
TPM3-213ENST00000368545 GRPEL1Q9HAV7 217 aa9.86□□□□□ -0.83
TPM3-213ENST00000368545 POLMQ9NP87 494 aaPredicted RBP9.86□□□□□ -0.83
TPM3-213ENST00000368545 PCDHA6Q9UN73 950 aa9.86□□□□□ -0.83
TPM3-213ENST00000368545 FAN1Q9Y2M0 1017 aa9.86□□□□□ -0.83
TPM3-213ENST00000368545 PCDHA8Q9Y5H6 950 aa9.86□□□□□ -0.83
TPM3-213ENST00000368545 OTOFQ9HC10 1997 aa9.86□□□□□ -0.83
TPM3-213ENST00000368545 MGAMO43451 1857 aa9.85□□□□□ -0.83
TPM3-213ENST00000368545 FAM237AA0A1B0GTK4 181 aa9.85□□□□□ -0.83
TPM3-213ENST00000368545 BCRP11274 1271 aa9.85□□□□□ -0.83
TPM3-213ENST00000368545 SLC16A2P36021 539 aa9.85□□□□□ -0.83
TPM3-213ENST00000368545 IKQ13123 557 aaPredicted RBP9.85□□□□□ -0.83
TPM3-213ENST00000368545 ORC2Q13416 577 aaPredicted RBP9.85□□□□□ -0.83
TPM3-213ENST00000368545 SNW1Q13573 536 aaKnown RBP9.85□□□□□ -0.83
TPM3-213ENST00000368545 TKFCQ3LXA3 575 aa9.85□□□□□ -0.83
TPM3-213ENST00000368545 ARSHQ5FYA8 562 aa9.85□□□□□ -0.83
TPM3-213ENST00000368545 PRICKLE2Q7Z3G6 844 aa9.85□□□□□ -0.83
TPM3-213ENST00000368545 TEX2Q8IWB9 1127 aa9.85□□□□□ -0.83
TPM3-213ENST00000368545 FMR1NBQ8N0W7 255 aaPredicted RBP9.85□□□□□ -0.83
TPM3-213ENST00000368545 PLD4Q96BZ4 506 aa9.85□□□□□ -0.83
TPM3-213ENST00000368545 GAS2L1Q99501 681 aaPredicted RBP9.85□□□□□ -0.83
TPM3-213ENST00000368545 SRPRBQ9Y5M8 271 aaKnown RBP9.85□□□□□ -0.83
TPM3-213ENST00000368545 PCNTO95613 3336 aa9.85□□□□□ -0.83
TPM3-213ENST00000368545 A0A1W2PNR3 127 aa9.85□□□□□ -0.83
TPM3-213ENST00000368545 TMEM232C9JQI7 657 aa9.85□□□□□ -0.83
TPM3-213ENST00000368545 ENC1O14682 589 aa9.85□□□□□ -0.83
TPM3-213ENST00000368545 TLR3O15455 904 aaKnown RBP9.85□□□□□ -0.83
TPM3-213ENST00000368545 PDPK1O15530 556 aa9.85□□□□□ -0.83
TPM3-213ENST00000368545 PLA2G6O60733 806 aa9.85□□□□□ -0.83
TPM3-213ENST00000368545 SASH3O75995 380 aa9.85□□□□□ -0.83
TPM3-213ENST00000368545 CCDC192P0DO97 292 aa9.85□□□□□ -0.83
TPM3-213ENST00000368545 ATP2C1P98194 919 aaPredicted RBP9.85□□□□□ -0.83
TPM3-213ENST00000368545 IFRD2Q12894 506 aaPredicted RBP9.85□□□□□ -0.83
TPM3-213ENST00000368545 SEPT6Q14141 434 aa9.85□□□□□ -0.83
TPM3-213ENST00000368545 NONOQ15233 471 aaKnown RBP eCLIP9.85□□□□□ -0.83
TPM3-213ENST00000368545 CDC37Q16543 378 aaPredicted RBP9.85□□□□□ -0.83
TPM3-213ENST00000368545 SYDE2Q5VT97 1194 aa9.85□□□□□ -0.83
TPM3-213ENST00000368545 RESP18Q5W5W9 173 aa9.85□□□□□ -0.83
TPM3-213ENST00000368545 AGMOQ6ZNB7 445 aa9.85□□□□□ -0.83
TPM3-213ENST00000368545 FASTKD5Q7L8L6 764 aaKnown RBP9.85□□□□□ -0.83
TPM3-213ENST00000368545 ARHGAP39Q9C0H5 1083 aa9.85□□□□□ -0.83
TPM3-213ENST00000368545 RIC8AQ9NPQ8 531 aa9.85□□□□□ -0.83
TPM3-213ENST00000368545 FBXO2Q9UK22 296 aaPredicted RBP9.85□□□□□ -0.83
TPM3-213ENST00000368545 A0A1B0GVL5 298 aa9.84□□□□□ -0.83
TPM3-213ENST00000368545 LAD1O00515 517 aa9.84□□□□□ -0.83
TPM3-213ENST00000368545 PFKFB1P16118 471 aa9.84□□□□□ -0.83
TPM3-213ENST00000368545 NDUFA8P51970 172 aa9.84□□□□□ -0.83
TPM3-213ENST00000368545 PRKCZQ05513 592 aa9.84□□□□□ -0.83
TPM3-213ENST00000368545 QRICH1Q2TAL8 776 aa9.84□□□□□ -0.83
TPM3-213ENST00000368545 ARL6IP4Q66PJ3 421 aaKnown RBP9.84□□□□□ -0.83
TPM3-213ENST00000368545 MCTP2Q6DN12 878 aa9.84□□□□□ -0.83
TPM3-213ENST00000368545 FAM160B2Q86V87 743 aa9.84□□□□□ -0.83
TPM3-213ENST00000368545 CHURC1Q8WUH1 139 aa9.84□□□□□ -0.83
TPM3-213ENST00000368545 MYLIPQ8WY64 445 aa9.84□□□□□ -0.83
TPM3-213ENST00000368545 LPAR1Q92633 364 aa9.84□□□□□ -0.83
TPM3-213ENST00000368545 CUL5Q93034 780 aa9.84□□□□□ -0.83
TPM3-213ENST00000368545 TIGD1Q96MW7 591 aa9.84□□□□□ -0.83
TPM3-213ENST00000368545 FEZ1Q99689 392 aa9.84□□□□□ -0.83
TPM3-213ENST00000368545 AMNQ9BXJ7 453 aa9.84□□□□□ -0.83
TPM3-213ENST00000368545 ZCCHC2Q9C0B9 1178 aaKnown RBP9.84□□□□□ -0.83
TPM3-213ENST00000368545 ZNF112Q9UJU3 913 aa9.84□□□□□ -0.83
TPM3-213ENST00000368545 MAPK8IP1Q9UQF2 711 aa9.84□□□□□ -0.83
TPM3-213ENST00000368545 HPSEQ9Y251 543 aa9.84□□□□□ -0.83
TPM3-213ENST00000368545 CXCL11O14625 94 aa9.83□□□□□ -0.84
TPM3-213ENST00000368545 S100BP04271 92 aaPredicted RBP9.83□□□□□ -0.84
TPM3-213ENST00000368545 COL6A1P12109 1028 aa9.83□□□□□ -0.84
TPM3-213ENST00000368545 MSX1P28360 303 aa9.83□□□□□ -0.84
TPM3-213ENST00000368545 SLC19A1P41440 591 aa9.83□□□□□ -0.84
TPM3-213ENST00000368545 GIPRP48546 466 aa9.83□□□□□ -0.84
TPM3-213ENST00000368545 MASP1P48740 699 aa9.83□□□□□ -0.84
TPM3-213ENST00000368545 MRPL12P52815 198 aaKnown RBP9.83□□□□□ -0.84
TPM3-213ENST00000368545 NBPF12Q5TAG4 269 aaPredicted RBP9.83□□□□□ -0.84
TPM3-213ENST00000368545 KANK3Q6NY19 840 aa9.83□□□□□ -0.84
TPM3-213ENST00000368545 CCDC174Q6PII3 467 aa9.83□□□□□ -0.84
TPM3-213ENST00000368545 SHC4Q6S5L8 630 aa9.83□□□□□ -0.84
TPM3-213ENST00000368545 BNC2Q6ZN30 1099 aaPredicted RBP9.83□□□□□ -0.84
TPM3-213ENST00000368545 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.83□□□□□ -0.84
TPM3-213ENST00000368545 CCNJLQ8IV13 435 aa9.83□□□□□ -0.84
TPM3-213ENST00000368545 ACER1Q8TDN7 264 aa9.83□□□□□ -0.84
TPM3-213ENST00000368545 CNTNAP3BQ96NU0 1288 aa9.83□□□□□ -0.84
TPM3-213ENST00000368545 LRFN3Q9BTN0 628 aa9.83□□□□□ -0.84
TPM3-213ENST00000368545 CNTNAP3Q9BZ76 1288 aa9.83□□□□□ -0.84
TPM3-213ENST00000368545 BRD7Q9NPI1 651 aa9.83□□□□□ -0.84
TPM3-213ENST00000368545 ACTR10Q9NZ32 417 aa9.83□□□□□ -0.84
TPM3-213ENST00000368545 SCAF8Q9UPN6 1271 aaKnown RBP9.83□□□□□ -0.84
TPM3-213ENST00000368545 PHIPQ8WWQ0 1821 aa9.83□□□□□ -0.84
TPM3-213ENST00000368545 J3QL48 77 aa9.83□□□□□ -0.84
TPM3-213ENST00000368545 SPINT1O43278 529 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms