RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 SCLYQ96I15 445 aa15.44■□□□□ 0.06
TPM3-211ENST00000368531 POLR3FQ9H1D9 316 aaPredicted RBP15.44■□□□□ 0.06
TPM3-211ENST00000368531 SERTAD1Q9UHV2 236 aa15.44■□□□□ 0.06
TPM3-211ENST00000368531 CDY2AQ9Y6F7 541 aa15.44■□□□□ 0.06
TPM3-211ENST00000368531 SIP14410 1827 aa15.43■□□□□ 0.06
TPM3-211ENST00000368531 M0QZ92 97 aa15.43■□□□□ 0.06
TPM3-211ENST00000368531 TIMP1P01033 207 aa15.43■□□□□ 0.06
TPM3-211ENST00000368531 NLRP11P59045 1033 aaKnown RBP15.43■□□□□ 0.06
TPM3-211ENST00000368531 MRPS6P82932 125 aaKnown RBP15.43■□□□□ 0.06
TPM3-211ENST00000368531 E2F4Q16254 413 aa15.43■□□□□ 0.06
TPM3-211ENST00000368531 IER5Q5VY09 327 aa15.43■□□□□ 0.06
TPM3-211ENST00000368531 CLEC17AQ6ZS10 378 aa15.43■□□□□ 0.06
TPM3-211ENST00000368531 C1orf186Q6ZWK4 172 aa15.43■□□□□ 0.06
TPM3-211ENST00000368531 LRRC8DQ7L1W4 858 aa15.43■□□□□ 0.06
TPM3-211ENST00000368531 DYMQ7RTS9 669 aa15.43■□□□□ 0.06
TPM3-211ENST00000368531 LINC01465Q8N7H1 131 aa15.43■□□□□ 0.06
TPM3-211ENST00000368531 TMEM87AQ8NBN3 555 aa15.43■□□□□ 0.06
TPM3-211ENST00000368531 MCPH1Q8NEM0 835 aa15.43■□□□□ 0.06
TPM3-211ENST00000368531 TCP11Q8WWU5 503 aa15.43■□□□□ 0.06
TPM3-211ENST00000368531 PRPF31Q8WWY3 499 aaKnown RBP15.43■□□□□ 0.06
TPM3-211ENST00000368531 NLRP4Q96MN2 994 aa15.43■□□□□ 0.06
TPM3-211ENST00000368531 SCLT1Q96NL6 688 aa15.43■□□□□ 0.06
TPM3-211ENST00000368531 WNT8AQ9H1J5 351 aa15.43■□□□□ 0.06
TPM3-211ENST00000368531 CDHR5Q9HBB8 845 aa15.43■□□□□ 0.06
TPM3-211ENST00000368531 HPSEQ9Y251 543 aa15.43■□□□□ 0.06
TPM3-211ENST00000368531 TANC1Q9C0D5 1861 aa15.42■□□□□ 0.06
TPM3-211ENST00000368531 SFI1A8K8P3 1242 aa15.42■□□□□ 0.06
TPM3-211ENST00000368531 RSPH10B2B2RC85 870 aa15.42■□□□□ 0.06
TPM3-211ENST00000368531 HIP1RO75146 1068 aa15.42■□□□□ 0.06
TPM3-211ENST00000368531 CHRNA1P02708 482 aa15.42■□□□□ 0.06
TPM3-211ENST00000368531 IQCF3P0C7M6 154 aa15.42■□□□□ 0.06
TPM3-211ENST00000368531 RSPH10BP0C881 870 aa15.42■□□□□ 0.06
TPM3-211ENST00000368531 SRGAP2CP0DJJ0 459 aa15.42■□□□□ 0.06
TPM3-211ENST00000368531 SELPP16109 830 aa15.42■□□□□ 0.06
TPM3-211ENST00000368531 AFMP43652 599 aa15.42■□□□□ 0.06
TPM3-211ENST00000368531 KIZQ2M2Z5 673 aa15.42■□□□□ 0.06
TPM3-211ENST00000368531 LONRF3Q496Y0 759 aa15.42■□□□□ 0.06
TPM3-211ENST00000368531 ARSHQ5FYA8 562 aa15.42■□□□□ 0.06
TPM3-211ENST00000368531 CEP57L1Q8IYX8 460 aa15.42■□□□□ 0.06
TPM3-211ENST00000368531 NME8Q8N427 588 aa15.42■□□□□ 0.06
TPM3-211ENST00000368531 PSPC1Q8WXF1 523 aaKnown RBP15.42■□□□□ 0.06
TPM3-211ENST00000368531 BADQ92934 168 aa15.42■□□□□ 0.06
TPM3-211ENST00000368531 ZHX3Q9H4I2 956 aa15.42■□□□□ 0.06
TPM3-211ENST00000368531 TRPV2Q9Y5S1 764 aa15.42■□□□□ 0.06
TPM3-211ENST00000368531 LTBP2Q14767 1821 aa15.42■□□□□ 0.06
TPM3-211ENST00000368531 MYMKA6NI61 221 aa15.41■□□□□ 0.06
TPM3-211ENST00000368531 PITPNM1O00562 1244 aa15.41■□□□□ 0.06
TPM3-211ENST00000368531 GAS2O43903 313 aaKnown RBP15.41■□□□□ 0.06
TPM3-211ENST00000368531 ZNF202O95125 648 aa15.41■□□□□ 0.06
TPM3-211ENST00000368531 LIG1P18858 919 aa15.41■□□□□ 0.06
TPM3-211ENST00000368531 ARL2P36404 184 aa15.41■□□□□ 0.06
TPM3-211ENST00000368531 MDM2Q00987 491 aaPredicted RBP15.41■□□□□ 0.06
TPM3-211ENST00000368531 LAMTOR4Q0VGL1 99 aa15.41■□□□□ 0.06
TPM3-211ENST00000368531 DEFB128Q7Z7B8 93 aa15.41■□□□□ 0.06
TPM3-211ENST00000368531 GRAMD1CQ8IYS0 662 aa15.41■□□□□ 0.06
TPM3-211ENST00000368531 ASAP3Q8TDY4 903 aa15.41■□□□□ 0.06
TPM3-211ENST00000368531 NLRP7Q8WX94 980 aa15.41■□□□□ 0.06
TPM3-211ENST00000368531 OSMRQ99650 979 aa15.41■□□□□ 0.06
TPM3-211ENST00000368531 LBHD1Q9BQE6 289 aaPredicted RBP15.41■□□□□ 0.06
TPM3-211ENST00000368531 PYM1Q9BRP8 204 aaKnown RBP15.41■□□□□ 0.06
TPM3-211ENST00000368531 CELF4Q9BZC1 486 aaKnown RBP15.41■□□□□ 0.06
TPM3-211ENST00000368531 OSBPL7Q9BZF2 842 aa15.41■□□□□ 0.06
TPM3-211ENST00000368531 COL4A3BPQ9Y5P4 624 aa15.41■□□□□ 0.06
TPM3-211ENST00000368531 A0A087WZ62 844 aa15.4■□□□□ 0.06
TPM3-211ENST00000368531 FAM237AA0A1B0GTK4 181 aa15.4■□□□□ 0.06
TPM3-211ENST00000368531 ACTN4O43707 911 aaKnown RBP15.4■□□□□ 0.06
TPM3-211ENST00000368531 CAND2O75155 1236 aa15.4■□□□□ 0.06
TPM3-211ENST00000368531 GPR32O75388 356 aa15.4■□□□□ 0.06
TPM3-211ENST00000368531 RPLP2P05387 115 aaKnown RBP15.4■□□□□ 0.06
TPM3-211ENST00000368531 CSF2RAP15509 400 aa15.4■□□□□ 0.06
TPM3-211ENST00000368531 GLRA2P23416 452 aa15.4■□□□□ 0.06
TPM3-211ENST00000368531 CASP1P29466 404 aa15.4■□□□□ 0.06
TPM3-211ENST00000368531 GPC3P51654 580 aa15.4■□□□□ 0.06
TPM3-211ENST00000368531 UBE2HP62256 183 aa15.4■□□□□ 0.06
TPM3-211ENST00000368531 RBL2Q08999 1139 aa15.4■□□□□ 0.06
TPM3-211ENST00000368531 MGAT3Q09327 533 aa15.4■□□□□ 0.06
TPM3-211ENST00000368531 MFSD5Q6N075 450 aa15.4■□□□□ 0.06
TPM3-211ENST00000368531 TRAF7Q6Q0C0 670 aa15.4■□□□□ 0.06
TPM3-211ENST00000368531 RPAINQ86UA6 219 aa15.4■□□□□ 0.06
TPM3-211ENST00000368531 CNNM3Q8NE01 707 aa15.4■□□□□ 0.06
TPM3-211ENST00000368531 BSNDQ8WZ55 320 aa15.4■□□□□ 0.06
TPM3-211ENST00000368531 DDX12PQ92771 950 aa15.4■□□□□ 0.06
TPM3-211ENST00000368531 REEP2Q9BRK0 252 aa15.4■□□□□ 0.06
TPM3-211ENST00000368531 FDXACB1Q9BRP7 624 aaPredicted RBP15.4■□□□□ 0.06
TPM3-211ENST00000368531 CUEDC2Q9H467 287 aa15.4■□□□□ 0.06
TPM3-211ENST00000368531 LRRIQ4A6NIV6 560 aa15.39■□□□□ 0.05
TPM3-211ENST00000368531 H0YGN5 161 aa15.39■□□□□ 0.05
TPM3-211ENST00000368531 GOLGA6L22H0YM25 854 aa15.39■□□□□ 0.05
TPM3-211ENST00000368531 NR1I2O75469 434 aa15.39■□□□□ 0.05
TPM3-211ENST00000368531 CSDE1O75534 798 aaKnown RBP15.39■□□□□ 0.05
TPM3-211ENST00000368531 FAM13AO94988 1023 aa15.39■□□□□ 0.05
TPM3-211ENST00000368531 SLFN14P0C7P3 912 aa15.39■□□□□ 0.05
TPM3-211ENST00000368531 ACRP10323 421 aa15.39■□□□□ 0.05
TPM3-211ENST00000368531 GHRP10912 638 aa15.39■□□□□ 0.05
TPM3-211ENST00000368531 IDEP14735 1019 aa15.39■□□□□ 0.05
TPM3-211ENST00000368531 GUCY2CP25092 1073 aa15.39■□□□□ 0.05
TPM3-211ENST00000368531 PEX3P56589 373 aa15.39■□□□□ 0.05
TPM3-211ENST00000368531 AMPD3Q01432 767 aa15.39■□□□□ 0.05
TPM3-211ENST00000368531 MAPK7Q13164 816 aa15.39■□□□□ 0.05
TPM3-211ENST00000368531 GIT2Q14161 759 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms