RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 LAG3P18627 525 aa18.07■□□□□ 0.48
CKS1B-202ENST00000368436 GPC3P51654 580 aa18.07■□□□□ 0.48
CKS1B-202ENST00000368436 ERVFC1P60507 584 aa18.07■□□□□ 0.48
CKS1B-202ENST00000368436 SSRP1Q08945 709 aaKnown RBP18.07■□□□□ 0.48
CKS1B-202ENST00000368436 PDE12Q6L8Q7 609 aaKnown RBP18.07■□□□□ 0.48
CKS1B-202ENST00000368436 B3GNT9Q6UX72 402 aa18.07■□□□□ 0.48
CKS1B-202ENST00000368436 RBM23Q86U06 439 aaKnown RBP18.07■□□□□ 0.48
CKS1B-202ENST00000368436 FAM177A1Q8N128 213 aaPredicted RBP18.07■□□□□ 0.48
CKS1B-202ENST00000368436 SMRP1Q8NCR6 262 aa18.07■□□□□ 0.48
CKS1B-202ENST00000368436 GJA10Q969M2 543 aa18.07■□□□□ 0.48
CKS1B-202ENST00000368436 MBOAT7Q96N66 472 aa18.07■□□□□ 0.48
CKS1B-202ENST00000368436 CASD1Q96PB1 797 aa18.07■□□□□ 0.48
CKS1B-202ENST00000368436 NIFKQ9BYG3 293 aaKnown RBP18.07■□□□□ 0.48
CKS1B-202ENST00000368436 TM6SF1Q9BZW5 370 aa18.07■□□□□ 0.48
CKS1B-202ENST00000368436 TMEM117Q9H0C3 514 aa18.07■□□□□ 0.48
CKS1B-202ENST00000368436 TLE6Q9H808 572 aa18.07■□□□□ 0.48
CKS1B-202ENST00000368436 TLR9Q9NR96 1032 aa18.07■□□□□ 0.48
CKS1B-202ENST00000368436 LZTS1Q9Y250 596 aa18.07■□□□□ 0.48
CKS1B-202ENST00000368436 FSCN2O14926 492 aa18.06■□□□□ 0.48
CKS1B-202ENST00000368436 HOXA2O43364 376 aa18.06■□□□□ 0.48
CKS1B-202ENST00000368436 CHMP2AO43633 222 aa18.06■□□□□ 0.48
CKS1B-202ENST00000368436 STBD1O95210 358 aa18.06■□□□□ 0.48
CKS1B-202ENST00000368436 DEXIO95424 95 aa18.06■□□□□ 0.48
CKS1B-202ENST00000368436 DARSP14868 501 aaKnown RBP18.06■□□□□ 0.48
CKS1B-202ENST00000368436 ZSCAN20P17040 1043 aaPredicted RBP18.06■□□□□ 0.48
CKS1B-202ENST00000368436 HOXD11P31277 338 aaPredicted RBP18.06■□□□□ 0.48
CKS1B-202ENST00000368436 PLCB3Q01970 1234 aa18.06■□□□□ 0.48
CKS1B-202ENST00000368436 HERC4Q5GLZ8 1057 aaPredicted RBP18.06■□□□□ 0.48
CKS1B-202ENST00000368436 LRRC55Q6ZSA7 311 aa18.06■□□□□ 0.48
CKS1B-202ENST00000368436 THNSL1Q8IYQ7 743 aa18.06■□□□□ 0.48
CKS1B-202ENST00000368436 BLIDQ8IZY5 108 aa18.06■□□□□ 0.48
CKS1B-202ENST00000368436 DAGLBQ8NCG7 672 aa18.06■□□□□ 0.48
CKS1B-202ENST00000368436 MICAL1Q8TDZ2 1067 aa18.06■□□□□ 0.48
CKS1B-202ENST00000368436 CEP89Q96ST8 783 aa18.06■□□□□ 0.48
CKS1B-202ENST00000368436 CYP46A1Q9Y6A2 500 aa18.06■□□□□ 0.48
CKS1B-202ENST00000368436 C5orf42Q9H799 3197 aa18.05■□□□□ 0.48
CKS1B-202ENST00000368436 FSD2A1L4K1 749 aa18.05■□□□□ 0.48
CKS1B-202ENST00000368436 TDP2O95551 362 aa18.05■□□□□ 0.48
CKS1B-202ENST00000368436 TBC1D8BQ0IIM8 1120 aa18.05■□□□□ 0.48
CKS1B-202ENST00000368436 NPY5RQ15761 445 aa18.05■□□□□ 0.48
CKS1B-202ENST00000368436 DUSP6Q16828 381 aa18.05■□□□□ 0.48
CKS1B-202ENST00000368436 GALNT17Q6IS24 598 aa18.05■□□□□ 0.48
CKS1B-202ENST00000368436 MOXD1Q6UVY6 613 aa18.05■□□□□ 0.48
CKS1B-202ENST00000368436 ECHDC2Q86YB7 292 aa18.05■□□□□ 0.48
CKS1B-202ENST00000368436 RNF135Q8IUD6 432 aa18.05■□□□□ 0.48
CKS1B-202ENST00000368436 MRPS27Q92552 414 aaKnown RBP18.05■□□□□ 0.48
CKS1B-202ENST00000368436 CDCA3Q99618 268 aaPredicted RBP18.05■□□□□ 0.48
CKS1B-202ENST00000368436 BARX2Q9UMQ3 279 aaPredicted RBP18.05■□□□□ 0.48
CKS1B-202ENST00000368436 IGKV6-21A0A0C4DH24 114 aa18.04■□□□□ 0.48
CKS1B-202ENST00000368436 A0A0U1RQF3 1178 aa18.04■□□□□ 0.48
CKS1B-202ENST00000368436 PER2O15055 1255 aa18.04■□□□□ 0.48
CKS1B-202ENST00000368436 DRP2Q13474 957 aa18.04■□□□□ 0.48
CKS1B-202ENST00000368436 KCNC3Q14003 757 aa18.04■□□□□ 0.48
CKS1B-202ENST00000368436 XKR3Q5GH77 459 aa18.04■□□□□ 0.48
CKS1B-202ENST00000368436 MIER3Q7Z3K6 550 aa18.04■□□□□ 0.48
CKS1B-202ENST00000368436 VN1R2Q8NFZ6 395 aa18.04■□□□□ 0.48
CKS1B-202ENST00000368436 ETNPPLQ8TBG4 499 aa18.04■□□□□ 0.48
CKS1B-202ENST00000368436 ZNF668Q96K58 619 aaPredicted RBP18.04■□□□□ 0.48
CKS1B-202ENST00000368436 LOC730098B7Z3J9 87 aa18.03■□□□□ 0.48
CKS1B-202ENST00000368436 CPLX1O14810 134 aa18.03■□□□□ 0.48
CKS1B-202ENST00000368436 EOMESO95936 686 aa18.03■□□□□ 0.48
CKS1B-202ENST00000368436 CDC42EP1Q00587 391 aa18.03■□□□□ 0.48
CKS1B-202ENST00000368436 CLLU1OSQ5K130 101 aa18.03■□□□□ 0.48
CKS1B-202ENST00000368436 KCNT2Q6UVM3 1135 aa18.03■□□□□ 0.48
CKS1B-202ENST00000368436 TMEM184AQ6ZMB5 413 aa18.03■□□□□ 0.48
CKS1B-202ENST00000368436 ZNF598Q86UK7 904 aaKnown RBP18.03■□□□□ 0.48
CKS1B-202ENST00000368436 LRRC43Q8N309 656 aa18.03■□□□□ 0.48
CKS1B-202ENST00000368436 AIFM3Q96NN9 605 aa18.03■□□□□ 0.48
CKS1B-202ENST00000368436 LARP6Q9BRS8 491 aaKnown RBP18.03■□□□□ 0.48
CKS1B-202ENST00000368436 PUF60Q9UHX1 559 aaKnown RBP18.03■□□□□ 0.48
CKS1B-202ENST00000368436 MUTYHQ9UIF7 546 aa18.03■□□□□ 0.48
CKS1B-202ENST00000368436 USP15Q9Y4E8 981 aaPredicted RBP18.03■□□□□ 0.48
CKS1B-202ENST00000368436 ATF7P17544 494 aaPredicted RBP18.02■□□□□ 0.48
CKS1B-202ENST00000368436 FGFR4P22455 802 aa18.02■□□□□ 0.48
CKS1B-202ENST00000368436 RBM10P98175 930 aaKnown RBP18.02■□□□□ 0.48
CKS1B-202ENST00000368436 CBX2Q14781 532 aaPredicted RBP18.02■□□□□ 0.48
CKS1B-202ENST00000368436 MTERF2Q49AM1 385 aa18.02■□□□□ 0.48
CKS1B-202ENST00000368436 CPLX2Q6PUV4 134 aaKnown RBP18.02■□□□□ 0.48
CKS1B-202ENST00000368436 ABI1Q8IZP0 508 aa18.02■□□□□ 0.48
CKS1B-202ENST00000368436 NLRP7Q8WX94 980 aa18.02■□□□□ 0.48
CKS1B-202ENST00000368436 ZNF558Q96NG5 402 aa18.02■□□□□ 0.48
CKS1B-202ENST00000368436 CHST12Q9NRB3 414 aa18.02■□□□□ 0.48
CKS1B-202ENST00000368436 DACT1Q9NYF0 836 aa18.02■□□□□ 0.48
CKS1B-202ENST00000368436 SEPT9Q9UHD8 586 aaPredicted RBP18.02■□□□□ 0.48
CKS1B-202ENST00000368436 TMEM150BA6NC51 233 aa18.01■□□□□ 0.47
CKS1B-202ENST00000368436 PPM1AP35813 382 aa18.01■□□□□ 0.47
CKS1B-202ENST00000368436 NONOQ15233 471 aaKnown RBP eCLIP18.01■□□□□ 0.47
CKS1B-202ENST00000368436 SUSD6Q92537 303 aa18.01■□□□□ 0.47
CKS1B-202ENST00000368436 EDAQ92838 391 aa18.01■□□□□ 0.47
CKS1B-202ENST00000368436 SCLT1Q96NL6 688 aa18.01■□□□□ 0.47
CKS1B-202ENST00000368436 TCF25Q9BQ70 676 aa18.01■□□□□ 0.47
CKS1B-202ENST00000368436 TRAIPQ9BWF2 469 aa18.01■□□□□ 0.47
CKS1B-202ENST00000368436 PHF7Q9BWX1 381 aaPredicted RBP18.01■□□□□ 0.47
CKS1B-202ENST00000368436 GCOM2Q9BZD3 368 aaPredicted RBP18.01■□□□□ 0.47
CKS1B-202ENST00000368436 NGRNQ9NPE2 291 aaKnown RBP18.01■□□□□ 0.47
CKS1B-202ENST00000368436 SPG21Q9NZD8 308 aa18.01■□□□□ 0.47
CKS1B-202ENST00000368436 DDX25Q9UHL0 483 aaKnown RBP18.01■□□□□ 0.47
CKS1B-202ENST00000368436 MAFO75444 373 aaPredicted RBP18■□□□□ 0.47
CKS1B-202ENST00000368436 DNM2P50570 870 aa18■□□□□ 0.47
CKS1B-202ENST00000368436 KRT17Q04695 432 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms