RNA–Protein interactions for RNA: ENST00000368298.2

LMNA-204, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 1,475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-204ENST00000368298 SUCLA2Q9P2R7 463 aaPredicted RBP20.78■□□□□ 0.92
LMNA-204ENST00000368298 ARHGEF35A5YM69 484 aa20.77■□□□□ 0.92
LMNA-204ENST00000368298 ASAP2O43150 1006 aa20.77■□□□□ 0.92
LMNA-204ENST00000368298 SLC34A2O95436 690 aa20.77■□□□□ 0.92
LMNA-204ENST00000368298 CYP11B2P19099 503 aa20.77■□□□□ 0.92
LMNA-204ENST00000368298 GPC3P51654 580 aa20.77■□□□□ 0.92
LMNA-204ENST00000368298 NLRP11P59045 1033 aaKnown RBP20.77■□□□□ 0.92
LMNA-204ENST00000368298 SPECC1Q5M775 1068 aa20.77■□□□□ 0.92
LMNA-204ENST00000368298 C9orf50Q5SZB4 431 aa20.77■□□□□ 0.92
LMNA-204ENST00000368298 CNKSR3Q6P9H4 555 aa20.77■□□□□ 0.92
LMNA-204ENST00000368298 PADI6Q6TGC4 694 aa20.77■□□□□ 0.92
LMNA-204ENST00000368298 TSHZ1Q6ZSZ6 1077 aa20.77■□□□□ 0.92
LMNA-204ENST00000368298 MCPH1Q8NEM0 835 aa20.77■□□□□ 0.92
LMNA-204ENST00000368298 SYMPKQ92797 1274 aaKnown RBP20.77■□□□□ 0.92
LMNA-204ENST00000368298 TCHHQ07283 1943 aa20.77■□□□□ 0.91
LMNA-204ENST00000368298 GOLGA6L22H0YM25 854 aa20.76■□□□□ 0.91
LMNA-204ENST00000368298 BAIAP3O94812 1187 aa20.76■□□□□ 0.91
LMNA-204ENST00000368298 ACTN1P12814 892 aa20.76■□□□□ 0.91
LMNA-204ENST00000368298 ARL2P36404 184 aa20.76■□□□□ 0.91
LMNA-204ENST00000368298 KARSQ15046 597 aaKnown RBP20.76■□□□□ 0.91
LMNA-204ENST00000368298 KIZQ2M2Z5 673 aa20.76■□□□□ 0.91
LMNA-204ENST00000368298 ZNF410Q86VK4 478 aa20.76■□□□□ 0.91
LMNA-204ENST00000368298 SYT2Q8N9I0 419 aaPredicted RBP20.76■□□□□ 0.91
LMNA-204ENST00000368298 DBF4BQ8NFT6 615 aa20.76■□□□□ 0.91
LMNA-204ENST00000368298 LEO1Q8WVC0 666 aaPredicted RBP20.76■□□□□ 0.91
LMNA-204ENST00000368298 PRPF31Q8WWY3 499 aaKnown RBP20.76■□□□□ 0.91
LMNA-204ENST00000368298 PSPC1Q8WXF1 523 aaKnown RBP20.76■□□□□ 0.91
LMNA-204ENST00000368298 APBB2Q92870 758 aa20.76■□□□□ 0.91
LMNA-204ENST00000368298 TMEM143Q96AN5 459 aa20.76■□□□□ 0.91
LMNA-204ENST00000368298 SCAND2PQ9GZW5 306 aaPredicted RBP20.76■□□□□ 0.91
LMNA-204ENST00000368298 PCDHA7Q9UN72 937 aa20.76■□□□□ 0.91
LMNA-204ENST00000368298 EIF4BP23588 611 aaKnown RBP20.75■□□□□ 0.91
LMNA-204ENST00000368298 POU5F1BQ06416 359 aa20.75■□□□□ 0.91
LMNA-204ENST00000368298 MXD4Q14582 209 aaPredicted RBP20.75■□□□□ 0.91
LMNA-204ENST00000368298 TMEM40Q8WWA1 233 aa20.75■□□□□ 0.91
LMNA-204ENST00000368298 SEPT8Q92599 483 aa20.75■□□□□ 0.91
LMNA-204ENST00000368298 IFIH1Q9BYX4 1025 aaKnown RBP20.75■□□□□ 0.91
LMNA-204ENST00000368298 AGO3Q9H9G7 860 aaKnown RBP20.75■□□□□ 0.91
LMNA-204ENST00000368298 BLOC1S4Q9NUP1 217 aa20.75■□□□□ 0.91
LMNA-204ENST00000368298 CCDC39Q9UFE4 941 aa20.75■□□□□ 0.91
LMNA-204ENST00000368298 COL4A3BPQ9Y5P4 624 aa20.75■□□□□ 0.91
LMNA-204ENST00000368298 TRIOBPQ9H2D6 2365 aa20.75■□□□□ 0.91
LMNA-204ENST00000368298 RANBP2P49792 3224 aaKnown RBP20.75■□□□□ 0.91
LMNA-204ENST00000368298 ABHD14A-ACY1A0A1B0GW23 586 aa20.75■□□□□ 0.91
LMNA-204ENST00000368298 TRAK2O60296 914 aa20.75■□□□□ 0.91
LMNA-204ENST00000368298 USO1O60763 962 aaKnown RBP20.75■□□□□ 0.91
LMNA-204ENST00000368298 EFCAB14O75071 495 aa20.75■□□□□ 0.91
LMNA-204ENST00000368298 GHRP10912 638 aa20.75■□□□□ 0.91
LMNA-204ENST00000368298 TXLNAP40222 546 aa20.75■□□□□ 0.91
LMNA-204ENST00000368298 ZRSR1Q15695 479 aaKnown RBP20.75■□□□□ 0.91
LMNA-204ENST00000368298 TCTN1Q2MV58 587 aa20.75■□□□□ 0.91
LMNA-204ENST00000368298 RHPN2Q8IUC4 686 aa20.75■□□□□ 0.91
LMNA-204ENST00000368298 LRRC15Q8TF66 581 aa20.75■□□□□ 0.91
LMNA-204ENST00000368298 CHAMP1Q96JM3 812 aa20.75■□□□□ 0.91
LMNA-204ENST00000368298 PLIN2Q99541 437 aa20.75■□□□□ 0.91
LMNA-204ENST00000368298 KCND2Q9NZV8 630 aa20.75■□□□□ 0.91
LMNA-204ENST00000368298 PLCG1P19174 1290 aa20.74■□□□□ 0.91
LMNA-204ENST00000368298 ME1P48163 572 aa20.74■□□□□ 0.91
LMNA-204ENST00000368298 SLC12A3P55017 1021 aa20.74■□□□□ 0.91
LMNA-204ENST00000368298 LAMTOR4Q0VGL1 99 aa20.74■□□□□ 0.91
LMNA-204ENST00000368298 IKBKEQ14164 716 aa20.74■□□□□ 0.91
LMNA-204ENST00000368298 ODR4Q5SWX8 454 aa20.74■□□□□ 0.91
LMNA-204ENST00000368298 RINT1Q6NUQ1 792 aa20.74■□□□□ 0.91
LMNA-204ENST00000368298 SHC4Q6S5L8 630 aa20.74■□□□□ 0.91
LMNA-204ENST00000368298 C1orf186Q6ZWK4 172 aa20.74■□□□□ 0.91
LMNA-204ENST00000368298 OTOP2Q7RTS6 562 aa20.74■□□□□ 0.91
LMNA-204ENST00000368298 SPATA32Q96LK8 384 aa20.74■□□□□ 0.91
LMNA-204ENST00000368298 OSMRQ99650 979 aa20.74■□□□□ 0.91
LMNA-204ENST00000368298 MTIF3Q9H2K0 278 aaKnown RBP20.74■□□□□ 0.91
LMNA-204ENST00000368298 IFT122Q9HBG6 1241 aa20.74■□□□□ 0.91
LMNA-204ENST00000368298 BMP2KQ9NSY1 1161 aaPredicted RBP20.74■□□□□ 0.91
LMNA-204ENST00000368298 STK17AQ9UEE5 414 aa20.74■□□□□ 0.91
LMNA-204ENST00000368298 PLA2G4BP0C869 781 aa20.73■□□□□ 0.91
LMNA-204ENST00000368298 DARSP14868 501 aaKnown RBP20.73■□□□□ 0.91
LMNA-204ENST00000368298 NCLP19338 710 aaKnown RBP20.73■□□□□ 0.91
LMNA-204ENST00000368298 DEKP35659 375 aaKnown RBP20.73■□□□□ 0.91
LMNA-204ENST00000368298 FXR1P51114 621 aaKnown RBP eCLIP20.73■□□□□ 0.91
LMNA-204ENST00000368298 RNPC3Q96LT9 517 aaKnown RBP20.73■□□□□ 0.91
LMNA-204ENST00000368298 TIPINQ9BVW5 301 aa20.73■□□□□ 0.91
LMNA-204ENST00000368298 GCOM2Q9BZD3 368 aaPredicted RBP20.73■□□□□ 0.91
LMNA-204ENST00000368298 PADI3Q9ULW8 664 aa20.73■□□□□ 0.91
LMNA-204ENST00000368298 GINS2Q9Y248 185 aa20.73■□□□□ 0.91
LMNA-204ENST00000368298 NOC2LQ9Y3T9 749 aaKnown RBP20.73■□□□□ 0.91
LMNA-204ENST00000368298 A0A087WZ62 844 aa20.72■□□□□ 0.91
LMNA-204ENST00000368298 GPR182O15218 404 aa20.72■□□□□ 0.91
LMNA-204ENST00000368298 RPS6KA5O75582 802 aa20.72■□□□□ 0.91
LMNA-204ENST00000368298 GUCY2CP25092 1073 aa20.72■□□□□ 0.91
LMNA-204ENST00000368298 CD52P31358 61 aa20.72■□□□□ 0.91
LMNA-204ENST00000368298 LRIT3Q3SXY7 679 aa20.72■□□□□ 0.91
LMNA-204ENST00000368298 NAALADL2Q58DX5 795 aa20.72■□□□□ 0.91
LMNA-204ENST00000368298 ADALQ6DHV7 355 aa20.72■□□□□ 0.91
LMNA-204ENST00000368298 IFNLR1Q8IU57 520 aaPredicted RBP20.72■□□□□ 0.91
LMNA-204ENST00000368298 KSR1Q8IVT5 923 aa20.72■□□□□ 0.91
LMNA-204ENST00000368298 RASSF8Q8NHQ8 419 aa20.72■□□□□ 0.91
LMNA-204ENST00000368298 NLRP7Q8WX94 980 aa20.72■□□□□ 0.91
LMNA-204ENST00000368298 RAD54LQ92698 747 aa20.72■□□□□ 0.91
LMNA-204ENST00000368298 PPP1R16BQ96T49 567 aa20.72■□□□□ 0.91
LMNA-204ENST00000368298 FDXACB1Q9BRP7 624 aaPredicted RBP20.72■□□□□ 0.91
LMNA-204ENST00000368298 NFKBIZQ9BYH8 718 aa20.72■□□□□ 0.91
LMNA-204ENST00000368298 INO80BQ9C086 356 aaPredicted RBP20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms