RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 FAM161BQ96MY7 647 aa25.03■■□□□ 1.6
ECHDC1-203ENST00000368291 RAB34Q9BZG1 259 aa25.03■■□□□ 1.6
ECHDC1-203ENST00000368291 DBR1Q9UK59 544 aaKnown RBP25.03■■□□□ 1.6
ECHDC1-203ENST00000368291 ST3GAL5Q9UNP4 418 aa25.03■■□□□ 1.6
ECHDC1-203ENST00000368291 HSP90AA1P07900 732 aaKnown RBP25.02■■□□□ 1.6
ECHDC1-203ENST00000368291 EXOC8Q8IYI6 725 aa25.02■■□□□ 1.6
ECHDC1-203ENST00000368291 TOP1MTQ969P6 601 aa25.02■■□□□ 1.6
ECHDC1-203ENST00000368291 NACC1Q96RE7 527 aa25.02■■□□□ 1.6
ECHDC1-203ENST00000368291 CLIC4Q9Y696 253 aa25.02■■□□□ 1.6
ECHDC1-203ENST00000368291 A0A087WZ62 844 aa25.01■■□□□ 1.59
ECHDC1-203ENST00000368291 VWA3AA6NCI4 1184 aa25.01■■□□□ 1.59
ECHDC1-203ENST00000368291 GAS2O43903 313 aaKnown RBP25.01■■□□□ 1.59
ECHDC1-203ENST00000368291 MGEA5O60502 916 aa25.01■■□□□ 1.59
ECHDC1-203ENST00000368291 ARHGEF15O94989 841 aa25.01■■□□□ 1.59
ECHDC1-203ENST00000368291 DARSP14868 501 aaKnown RBP25.01■■□□□ 1.59
ECHDC1-203ENST00000368291 EIF4BP23588 611 aaKnown RBP25.01■■□□□ 1.59
ECHDC1-203ENST00000368291 NFX1Q12986 1120 aaKnown RBP25.01■■□□□ 1.59
ECHDC1-203ENST00000368291 PTPAQ15257 358 aa25.01■■□□□ 1.59
ECHDC1-203ENST00000368291 FAM117BQ6P1L5 589 aa25.01■■□□□ 1.59
ECHDC1-203ENST00000368291 RHPN2Q8IUC4 686 aa25.01■■□□□ 1.59
ECHDC1-203ENST00000368291 SNX29Q8TEQ0 813 aa25.01■■□□□ 1.59
ECHDC1-203ENST00000368291 PRPF31Q8WWY3 499 aaKnown RBP25.01■■□□□ 1.59
ECHDC1-203ENST00000368291 MTRQ99707 1265 aa25.01■■□□□ 1.59
ECHDC1-203ENST00000368291 FDXACB1Q9BRP7 624 aaPredicted RBP25.01■■□□□ 1.59
ECHDC1-203ENST00000368291 FTHL17Q9BXU8 183 aa25.01■■□□□ 1.59
ECHDC1-203ENST00000368291 ZNF576Q9H609 170 aa25.01■■□□□ 1.59
ECHDC1-203ENST00000368291 CHD7Q9P2D1 2997 aa25■■□□□ 1.59
ECHDC1-203ENST00000368291 GPR182O15218 404 aa25■■□□□ 1.59
ECHDC1-203ENST00000368291 TLL1O43897 1013 aa25■■□□□ 1.59
ECHDC1-203ENST00000368291 CSDE1O75534 798 aaKnown RBP25■■□□□ 1.59
ECHDC1-203ENST00000368291 DGAT1O75907 488 aa25■■□□□ 1.59
ECHDC1-203ENST00000368291 CA3P07451 260 aa25■■□□□ 1.59
ECHDC1-203ENST00000368291 CDC42EP1Q00587 391 aa25■■□□□ 1.59
ECHDC1-203ENST00000368291 ZNF410Q86VK4 478 aa25■■□□□ 1.59
ECHDC1-203ENST00000368291 CRIPAKQ8N1N5 446 aa25■■□□□ 1.59
ECHDC1-203ENST00000368291 NLRP7Q8WX94 980 aa25■■□□□ 1.59
ECHDC1-203ENST00000368291 GUCD1Q96NT3 240 aa25■■□□□ 1.59
ECHDC1-203ENST00000368291 TSPYL2Q9H2G4 693 aaPredicted RBP25■■□□□ 1.59
ECHDC1-203ENST00000368291 ZSCAN16Q9H4T2 348 aaPredicted RBP25■■□□□ 1.59
ECHDC1-203ENST00000368291 COL4A3BPQ9Y5P4 624 aa25■■□□□ 1.59
ECHDC1-203ENST00000368291 STK24Q9Y6E0 443 aa25■■□□□ 1.59
ECHDC1-203ENST00000368291 COL4A6Q14031 1691 aa24.99■■□□□ 1.59
ECHDC1-203ENST00000368291 LCHNA4D1U4 455 aa24.99■■□□□ 1.59
ECHDC1-203ENST00000368291 SLC34A2O95436 690 aa24.99■■□□□ 1.59
ECHDC1-203ENST00000368291 BMP15O95972 392 aa24.99■■□□□ 1.59
ECHDC1-203ENST00000368291 HTRA4P83105 476 aaPredicted RBP24.99■■□□□ 1.59
ECHDC1-203ENST00000368291 GRIN1Q05586 938 aa24.99■■□□□ 1.59
ECHDC1-203ENST00000368291 ATP6V0A4Q9HBG4 840 aa24.99■■□□□ 1.59
ECHDC1-203ENST00000368291 IFT122Q9HBG6 1241 aa24.99■■□□□ 1.59
ECHDC1-203ENST00000368291 KIAA1024Q9UPX6 916 aa24.99■■□□□ 1.59
ECHDC1-203ENST00000368291 NLRC5Q86WI3 1866 aa24.98■■□□□ 1.59
ECHDC1-203ENST00000368291 FGFR4P22455 802 aa24.98■■□□□ 1.59
ECHDC1-203ENST00000368291 DSC3Q14574 896 aa24.98■■□□□ 1.59
ECHDC1-203ENST00000368291 KRT79Q5XKE5 535 aa24.98■■□□□ 1.59
ECHDC1-203ENST00000368291 TCP11Q8WWU5 503 aa24.98■■□□□ 1.59
ECHDC1-203ENST00000368291 PSPC1Q8WXF1 523 aaKnown RBP24.98■■□□□ 1.59
ECHDC1-203ENST00000368291 NLRP4Q96MN2 994 aa24.98■■□□□ 1.59
ECHDC1-203ENST00000368291 SCLT1Q96NL6 688 aa24.98■■□□□ 1.59
ECHDC1-203ENST00000368291 RAD9AQ99638 391 aa24.98■■□□□ 1.59
ECHDC1-203ENST00000368291 ZBED2Q9BTP6 218 aa24.98■■□□□ 1.59
ECHDC1-203ENST00000368291 SLC28A3Q9HAS3 691 aa24.98■■□□□ 1.59
ECHDC1-203ENST00000368291 DDX19AQ9NUU7 478 aaKnown RBP24.98■■□□□ 1.59
ECHDC1-203ENST00000368291 USO1O60763 962 aaKnown RBP24.97■■□□□ 1.59
ECHDC1-203ENST00000368291 UPP2O95045 317 aa24.97■■□□□ 1.59
ECHDC1-203ENST00000368291 LAMTOR4Q0VGL1 99 aa24.97■■□□□ 1.59
ECHDC1-203ENST00000368291 PKP1Q13835 747 aa24.97■■□□□ 1.59
ECHDC1-203ENST00000368291 ODR4Q5SWX8 454 aa24.97■■□□□ 1.59
ECHDC1-203ENST00000368291 HYIQ5T013 277 aa24.97■■□□□ 1.59
ECHDC1-203ENST00000368291 CCDC43Q96MW1 224 aaKnown RBP24.97■■□□□ 1.59
ECHDC1-203ENST00000368291 USP28Q96RU2 1077 aa24.97■■□□□ 1.59
ECHDC1-203ENST00000368291 GCOM2Q9BZD3 368 aaPredicted RBP24.97■■□□□ 1.59
ECHDC1-203ENST00000368291 FNDC1Q4ZHG4 1894 aaPredicted RBP24.97■■□□□ 1.59
ECHDC1-203ENST00000368291 ARL2P36404 184 aa24.96■■□□□ 1.59
ECHDC1-203ENST00000368291 GRIN2CQ14957 1233 aa24.96■■□□□ 1.59
ECHDC1-203ENST00000368291 PPP2R2DQ66LE6 453 aa24.96■■□□□ 1.59
ECHDC1-203ENST00000368291 FAM43BQ6ZT52 329 aaPredicted RBP24.96■■□□□ 1.59
ECHDC1-203ENST00000368291 KCNK18Q7Z418 384 aa24.96■■□□□ 1.59
ECHDC1-203ENST00000368291 SPRED2Q7Z698 418 aa24.96■■□□□ 1.59
ECHDC1-203ENST00000368291 PNMA5Q96PV4 448 aa24.96■■□□□ 1.59
ECHDC1-203ENST00000368291 ADAM2Q99965 735 aa24.96■■□□□ 1.59
ECHDC1-203ENST00000368291 RGS18Q9NS28 235 aa24.96■■□□□ 1.59
ECHDC1-203ENST00000368291 E9PMD0 336 aa24.95■■□□□ 1.59
ECHDC1-203ENST00000368291 TAP1Q03518 808 aa24.95■■□□□ 1.59
ECHDC1-203ENST00000368291 PADI6Q6TGC4 694 aa24.95■■□□□ 1.59
ECHDC1-203ENST00000368291 ASAP3Q8TDY4 903 aa24.95■■□□□ 1.59
ECHDC1-203ENST00000368291 GPRC5CQ9NQ84 441 aa24.95■■□□□ 1.59
ECHDC1-203ENST00000368291 INSL6Q9Y581 213 aa24.95■■□□□ 1.59
ECHDC1-203ENST00000368291 MYH11P35749 1972 aa24.95■■□□□ 1.58
ECHDC1-203ENST00000368291 ARHGEF35A5YM69 484 aa24.94■■□□□ 1.58
ECHDC1-203ENST00000368291 C9IYK1 514 aa24.94■■□□□ 1.58
ECHDC1-203ENST00000368291 ASAP2O43150 1006 aa24.94■■□□□ 1.58
ECHDC1-203ENST00000368291 SRGAP2CP0DJJ0 459 aa24.94■■□□□ 1.58
ECHDC1-203ENST00000368291 ZSCAN22P10073 491 aaPredicted RBP24.94■■□□□ 1.58
ECHDC1-203ENST00000368291 PDIA4P13667 645 aaKnown RBP24.94■■□□□ 1.58
ECHDC1-203ENST00000368291 CEBPZQ03701 1054 aaKnown RBP24.94■■□□□ 1.58
ECHDC1-203ENST00000368291 GRB10Q13322 594 aa24.94■■□□□ 1.58
ECHDC1-203ENST00000368291 FOXD4L5Q5VV16 416 aaPredicted RBP24.94■■□□□ 1.58
ECHDC1-203ENST00000368291 SP7Q8TDD2 431 aaPredicted RBP24.94■■□□□ 1.58
ECHDC1-203ENST00000368291 FOXD4L4Q8WXT5 416 aaPredicted RBP24.94■■□□□ 1.58
ECHDC1-203ENST00000368291 AK8Q96MA6 479 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms