RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 PPP2R2DQ66LE6 453 aa11.03□□□□□ -0.64
CD48-202ENST00000368046 MCTP1Q6DN14 999 aa11.03□□□□□ -0.64
CD48-202ENST00000368046 TMCO2Q7Z6W1 182 aaPredicted RBP11.03□□□□□ -0.64
CD48-202ENST00000368046 RTN4RL1Q86UN2 441 aaPredicted RBP11.03□□□□□ -0.64
CD48-202ENST00000368046 MYOCDQ8IZQ8 938 aa11.03□□□□□ -0.64
CD48-202ENST00000368046 LRRC71Q8N4P6 559 aa11.03□□□□□ -0.64
CD48-202ENST00000368046 NEK9Q8TD19 979 aa11.03□□□□□ -0.64
CD48-202ENST00000368046 INTS4Q96HW7 963 aaKnown RBP11.03□□□□□ -0.64
CD48-202ENST00000368046 CEP170P1Q96L14 293 aa11.03□□□□□ -0.64
CD48-202ENST00000368046 MAP7D2Q96T17 732 aa11.03□□□□□ -0.64
CD48-202ENST00000368046 SH2D3AQ9BRG2 576 aa11.03□□□□□ -0.64
CD48-202ENST00000368046 LXNQ9BS40 222 aa11.03□□□□□ -0.64
CD48-202ENST00000368046 NOC2LQ9Y3T9 749 aaKnown RBP11.03□□□□□ -0.64
CD48-202ENST00000368046 TRIP12Q14669 1992 aaPredicted RBP11.03□□□□□ -0.64
CD48-202ENST00000368046 RBAK-RBAKDNI3L0D1 243 aa11.02□□□□□ -0.65
CD48-202ENST00000368046 ZBTB39O15060 712 aa11.02□□□□□ -0.65
CD48-202ENST00000368046 UPP2O95045 317 aa11.02□□□□□ -0.65
CD48-202ENST00000368046 CA3P07451 260 aa11.02□□□□□ -0.65
CD48-202ENST00000368046 OR52Z1P0C646 297 aa11.02□□□□□ -0.65
CD48-202ENST00000368046 EIF4BP23588 611 aaKnown RBP11.02□□□□□ -0.65
CD48-202ENST00000368046 NPEPPSP55786 919 aa11.02□□□□□ -0.65
CD48-202ENST00000368046 HTRA4P83105 476 aaPredicted RBP11.02□□□□□ -0.65
CD48-202ENST00000368046 CYP4A11Q02928 519 aa11.02□□□□□ -0.65
CD48-202ENST00000368046 PAK2Q13177 524 aa11.02□□□□□ -0.65
CD48-202ENST00000368046 PTGDRQ13258 359 aa11.02□□□□□ -0.65
CD48-202ENST00000368046 FAM117BQ6P1L5 589 aa11.02□□□□□ -0.65
CD48-202ENST00000368046 SLC7A3Q8WY07 619 aa11.02□□□□□ -0.65
CD48-202ENST00000368046 ADAMTS10Q9H324 1103 aa11.02□□□□□ -0.65
CD48-202ENST00000368046 ANKEF1Q9NU02 776 aa11.02□□□□□ -0.65
CD48-202ENST00000368046 HCSTQ9UBK5 93 aa11.02□□□□□ -0.65
CD48-202ENST00000368046 ST3GAL5Q9UNP4 418 aa11.02□□□□□ -0.65
CD48-202ENST00000368046 PCDHB6Q9Y5E3 794 aa11.02□□□□□ -0.65
CD48-202ENST00000368046 SCN5AQ14524 2016 aa11.02□□□□□ -0.65
CD48-202ENST00000368046 K7ELQ4 463 aaPredicted RBP11.01□□□□□ -0.65
CD48-202ENST00000368046 LAD1O00515 517 aa11.01□□□□□ -0.65
CD48-202ENST00000368046 ASAP2O43150 1006 aa11.01□□□□□ -0.65
CD48-202ENST00000368046 SPATA31C1P0DKV0 1188 aa11.01□□□□□ -0.65
CD48-202ENST00000368046 PDCP20941 246 aa11.01□□□□□ -0.65
CD48-202ENST00000368046 RFC5P40937 340 aa11.01□□□□□ -0.65
CD48-202ENST00000368046 GPC3P51654 580 aa11.01□□□□□ -0.65
CD48-202ENST00000368046 TAP1Q03518 808 aa11.01□□□□□ -0.65
CD48-202ENST00000368046 NBR1Q14596 966 aa11.01□□□□□ -0.65
CD48-202ENST00000368046 TMEM266Q2M3C6 531 aa11.01□□□□□ -0.65
CD48-202ENST00000368046 XKR9Q5GH70 373 aa11.01□□□□□ -0.65
CD48-202ENST00000368046 PLA2G4FQ68DD2 849 aa11.01□□□□□ -0.65
CD48-202ENST00000368046 CATSPER3Q86XQ3 398 aa11.01□□□□□ -0.65
CD48-202ENST00000368046 TMEM40Q8WWA1 233 aa11.01□□□□□ -0.65
CD48-202ENST00000368046 MYLIPQ8WY64 445 aa11.01□□□□□ -0.65
CD48-202ENST00000368046 SNX21Q969T3 373 aa11.01□□□□□ -0.65
CD48-202ENST00000368046 NACC1Q96RE7 527 aa11.01□□□□□ -0.65
CD48-202ENST00000368046 GAS2L1Q99501 681 aaPredicted RBP11.01□□□□□ -0.65
CD48-202ENST00000368046 OSMRQ99650 979 aa11.01□□□□□ -0.65
CD48-202ENST00000368046 POLR3CQ9BUI4 534 aaPredicted RBP11.01□□□□□ -0.65
CD48-202ENST00000368046 INO80BQ9C086 356 aaPredicted RBP11.01□□□□□ -0.65
CD48-202ENST00000368046 PRDM12Q9H4Q4 367 aa11.01□□□□□ -0.65
CD48-202ENST00000368046 DHX33Q9H6R0 707 aaKnown RBP11.01□□□□□ -0.65
CD48-202ENST00000368046 ERVK-5Q9HDB9 667 aa11.01□□□□□ -0.65
CD48-202ENST00000368046 TUFT1Q9NNX1 390 aa11.01□□□□□ -0.65
CD48-202ENST00000368046 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.01□□□□□ -0.65
CD48-202ENST00000368046 SUCLA2Q9P2R7 463 aaPredicted RBP11.01□□□□□ -0.65
CD48-202ENST00000368046 STK24Q9Y6E0 443 aa11.01□□□□□ -0.65
CD48-202ENST00000368046 DARSP14868 501 aaKnown RBP11□□□□□ -0.65
CD48-202ENST00000368046 MUTP22033 750 aa11□□□□□ -0.65
CD48-202ENST00000368046 RPA1P27694 616 aa11□□□□□ -0.65
CD48-202ENST00000368046 PRPHP41219 470 aa11□□□□□ -0.65
CD48-202ENST00000368046 POLGP54098 1239 aaPredicted RBP11□□□□□ -0.65
CD48-202ENST00000368046 DRP2Q13474 957 aa11□□□□□ -0.65
CD48-202ENST00000368046 DTHD1Q6ZMT9 781 aa11□□□□□ -0.65
CD48-202ENST00000368046 FAM228AQ86W67 206 aa11□□□□□ -0.65
CD48-202ENST00000368046 CRIPAKQ8N1N5 446 aa11□□□□□ -0.65
CD48-202ENST00000368046 ERMNQ8TAM6 284 aa11□□□□□ -0.65
CD48-202ENST00000368046 PIGOQ8TEQ8 1089 aa11□□□□□ -0.65
CD48-202ENST00000368046 TCP11Q8WWU5 503 aa11□□□□□ -0.65
CD48-202ENST00000368046 PRPF31Q8WWY3 499 aaKnown RBP11□□□□□ -0.65
CD48-202ENST00000368046 NLRP7Q8WX94 980 aa11□□□□□ -0.65
CD48-202ENST00000368046 KHSRPQ92945 711 aaKnown RBP eCLIP11□□□□□ -0.65
CD48-202ENST00000368046 PPP1R16BQ96T49 567 aa11□□□□□ -0.65
CD48-202ENST00000368046 GCOM2Q9BZD3 368 aaPredicted RBP11□□□□□ -0.65
CD48-202ENST00000368046 TMX1Q9H3N1 280 aa11□□□□□ -0.65
CD48-202ENST00000368046 RGS18Q9NS28 235 aa11□□□□□ -0.65
CD48-202ENST00000368046 LRWD1Q9UFC0 647 aa11□□□□□ -0.65
CD48-202ENST00000368046 TET1Q8NFU7 2136 aa11□□□□□ -0.65
CD48-202ENST00000368046 TANC1Q9C0D5 1861 aa11□□□□□ -0.65
CD48-202ENST00000368046 KAT6AQ92794 2004 aa10.99□□□□□ -0.65
CD48-202ENST00000368046 A0A087WZ62 844 aa10.99□□□□□ -0.65
CD48-202ENST00000368046 LCHNA4D1U4 455 aa10.99□□□□□ -0.65
CD48-202ENST00000368046 LINC01553A4QN01 128 aa10.99□□□□□ -0.65
CD48-202ENST00000368046 GAS2O43903 313 aaKnown RBP10.99□□□□□ -0.65
CD48-202ENST00000368046 MED24O75448 989 aa10.99□□□□□ -0.65
CD48-202ENST00000368046 DGKIO75912 1065 aa10.99□□□□□ -0.65
CD48-202ENST00000368046 STAG3L1P0CL83 205 aa10.99□□□□□ -0.65
CD48-202ENST00000368046 FOSL2P15408 326 aa10.99□□□□□ -0.65
CD48-202ENST00000368046 ZSCAN20P17040 1043 aaPredicted RBP10.99□□□□□ -0.65
CD48-202ENST00000368046 RARRES1P49788 294 aa10.99□□□□□ -0.65
CD48-202ENST00000368046 ERVK-21P61565 698 aa10.99□□□□□ -0.65
CD48-202ENST00000368046 FAM189BP81408 668 aa10.99□□□□□ -0.65
CD48-202ENST00000368046 SLC24A5Q71RS6 500 aa10.99□□□□□ -0.65
CD48-202ENST00000368046 BRAPQ7Z569 592 aa10.99□□□□□ -0.65
CD48-202ENST00000368046 ZNF410Q86VK4 478 aa10.99□□□□□ -0.65
CD48-202ENST00000368046 RHPN2Q8IUC4 686 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms