RNA–Protein interactions for RNA: ENST00000367002.4

RD3-201, Transcript of retinal degeneration 3, GUCY2D regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RD3, Length 4,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3-201ENST00000367002 RNF169Q8NCN4 708 aa12.31□□□□□ -0.44
RD3-201ENST00000367002 EIF2AK1Q9BQI3 630 aaKnown RBP12.31□□□□□ -0.44
RD3-201ENST00000367002 BAZ2BQ9UIF8 2168 aaKnown RBP12.31□□□□□ -0.44
RD3-201ENST00000367002 ADAMTS13Q76LX8 1427 aa12.31□□□□□ -0.44
RD3-201ENST00000367002 KRT14P02533 472 aa12.31□□□□□ -0.44
RD3-201ENST00000367002 SRGAP2CP0DJJ0 459 aa12.31□□□□□ -0.44
RD3-201ENST00000367002 CD44P16070 742 aaKnown RBP12.31□□□□□ -0.44
RD3-201ENST00000367002 NMT1P30419 496 aaKnown RBP12.31□□□□□ -0.44
RD3-201ENST00000367002 CHRNA3P32297 505 aa12.31□□□□□ -0.44
RD3-201ENST00000367002 NFIXQ14938 502 aa12.31□□□□□ -0.44
RD3-201ENST00000367002 SCARA5Q6ZMJ2 495 aa12.31□□□□□ -0.44
RD3-201ENST00000367002 ERICH1Q86X53 443 aa12.31□□□□□ -0.44
RD3-201ENST00000367002 KCTD6Q8NC69 237 aa12.31□□□□□ -0.44
RD3-201ENST00000367002 ZNF564Q8TBZ8 553 aaPredicted RBP12.31□□□□□ -0.44
RD3-201ENST00000367002 RNPC3Q96LT9 517 aaKnown RBP12.31□□□□□ -0.44
RD3-201ENST00000367002 MED10Q9BTT4 135 aa12.31□□□□□ -0.44
RD3-201ENST00000367002 MSTO1Q9BUK6 570 aa12.31□□□□□ -0.44
RD3-201ENST00000367002 PSAPP07602 524 aa12.31□□□□□ -0.44
RD3-201ENST00000367002 BRAFP15056 766 aa12.31□□□□□ -0.44
RD3-201ENST00000367002 UCHL3P15374 230 aa12.31□□□□□ -0.44
RD3-201ENST00000367002 H2AFXP16104 143 aaPredicted RBP12.31□□□□□ -0.44
RD3-201ENST00000367002 KLK7P49862 253 aa12.31□□□□□ -0.44
RD3-201ENST00000367002 ZNF543Q08ER8 600 aa12.31□□□□□ -0.44
RD3-201ENST00000367002 NKX1-1Q15270 411 aaPredicted RBP12.31□□□□□ -0.44
RD3-201ENST00000367002 PASD1Q8IV76 773 aa12.31□□□□□ -0.44
RD3-201ENST00000367002 TRIM59Q8IWR1 403 aa12.31□□□□□ -0.44
RD3-201ENST00000367002 CCNYQ8ND76 341 aa12.31□□□□□ -0.44
RD3-201ENST00000367002 SCYL1Q96KG9 808 aa12.31□□□□□ -0.44
RD3-201ENST00000367002 INTS2Q9H0H0 1204 aaKnown RBP12.31□□□□□ -0.44
RD3-201ENST00000367002 RBM12Q9NTZ6 932 aaKnown RBP12.31□□□□□ -0.44
RD3-201ENST00000367002 TTC7AQ9ULT0 858 aaPredicted RBP12.31□□□□□ -0.44
RD3-201ENST00000367002 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.31□□□□□ -0.44
RD3-201ENST00000367002 SCINQ9Y6U3 715 aa12.31□□□□□ -0.44
RD3-201ENST00000367002 NPHP3-ACAD11A0A0J9YXS1 232 aa12.3□□□□□ -0.44
RD3-201ENST00000367002 CAMTA2O94983 1202 aa12.3□□□□□ -0.44
RD3-201ENST00000367002 CPP00450 1065 aa12.3□□□□□ -0.44
RD3-201ENST00000367002 ACTN1P12814 892 aa12.3□□□□□ -0.44
RD3-201ENST00000367002 SERPINB6P35237 376 aa12.3□□□□□ -0.44
RD3-201ENST00000367002 GPSM2P81274 684 aa12.3□□□□□ -0.44
RD3-201ENST00000367002 KCTD2Q14681 263 aa12.3□□□□□ -0.44
RD3-201ENST00000367002 OR6B2Q6IFH4 312 aa12.3□□□□□ -0.44
RD3-201ENST00000367002 CCDC137Q6PK04 289 aaKnown RBP12.3□□□□□ -0.44
RD3-201ENST00000367002 RNF207Q6ZRF8 634 aa12.3□□□□□ -0.44
RD3-201ENST00000367002 RNF25Q96BH1 459 aaPredicted RBP12.3□□□□□ -0.44
RD3-201ENST00000367002 MAP3K14Q99558 947 aa12.3□□□□□ -0.44
RD3-201ENST00000367002 APOL6Q9BWW8 343 aa12.3□□□□□ -0.44
RD3-201ENST00000367002 IQGAP1P46940 1657 aa12.3□□□□□ -0.44
RD3-201ENST00000367002 DENND3A2RUS2 1198 aa12.3□□□□□ -0.44
RD3-201ENST00000367002 CASQ2O14958 399 aaPredicted RBP12.3□□□□□ -0.44
RD3-201ENST00000367002 PLA2G4AP47712 749 aa12.3□□□□□ -0.44
RD3-201ENST00000367002 QARSP47897 775 aaKnown RBP12.3□□□□□ -0.44
RD3-201ENST00000367002 THNSL1Q8IYQ7 743 aa12.3□□□□□ -0.44
RD3-201ENST00000367002 MCPH1Q8NEM0 835 aa12.3□□□□□ -0.44
RD3-201ENST00000367002 GINM1Q9NU53 330 aa12.3□□□□□ -0.44
RD3-201ENST00000367002 AFG3L2Q9Y4W6 797 aa12.3□□□□□ -0.44
RD3-201ENST00000367002 ABCA9Q8IUA7 1624 aa12.3□□□□□ -0.44
RD3-201ENST00000367002 EMSYQ7Z589 1322 aa12.3□□□□□ -0.44
RD3-201ENST00000367002 WDR64B1ANS9 1081 aa12.3□□□□□ -0.44
RD3-201ENST00000367002 STXBP3O00186 592 aa12.3□□□□□ -0.44
RD3-201ENST00000367002 P4HBP07237 508 aaKnown RBP12.3□□□□□ -0.44
RD3-201ENST00000367002 RASA1P20936 1047 aa12.3□□□□□ -0.44
RD3-201ENST00000367002 CCND2P30279 289 aa12.3□□□□□ -0.44
RD3-201ENST00000367002 SOX5P35711 763 aa12.3□□□□□ -0.44
RD3-201ENST00000367002 SPARCL1Q14515 664 aa12.3□□□□□ -0.44
RD3-201ENST00000367002 TMEM270Q6UE05 265 aa12.3□□□□□ -0.44
RD3-201ENST00000367002 TRIM42Q8IWZ5 723 aa12.3□□□□□ -0.44
RD3-201ENST00000367002 LXNQ9BS40 222 aa12.3□□□□□ -0.44
RD3-201ENST00000367002 NUP85Q9BW27 656 aa12.3□□□□□ -0.44
RD3-201ENST00000367002 NGRNQ9NPE2 291 aaKnown RBP12.3□□□□□ -0.44
RD3-201ENST00000367002 MAPK13O15264 365 aa12.29□□□□□ -0.44
RD3-201ENST00000367002 TJP3O95049 919 aa12.29□□□□□ -0.44
RD3-201ENST00000367002 GALCP54803 685 aa12.29□□□□□ -0.44
RD3-201ENST00000367002 CCDC117Q8IWD4 279 aaPredicted RBP12.29□□□□□ -0.44
RD3-201ENST00000367002 HACE1Q8IYU2 909 aa12.29□□□□□ -0.44
RD3-201ENST00000367002 MARCH10Q8NA82 808 aaPredicted RBP12.29□□□□□ -0.44
RD3-201ENST00000367002 TMEM35BQ8NCS4 154 aa12.29□□□□□ -0.44
RD3-201ENST00000367002 MASTLQ96GX5 879 aa12.29□□□□□ -0.44
RD3-201ENST00000367002 FAM213AQ9BRX8 229 aa12.29□□□□□ -0.44
RD3-201ENST00000367002 FUT8Q9BYC5 575 aa12.29□□□□□ -0.44
RD3-201ENST00000367002 NACA2Q9H009 215 aa12.29□□□□□ -0.44
RD3-201ENST00000367002 PLAGL2Q9UPG8 496 aa12.29□□□□□ -0.44
RD3-201ENST00000367002 AK9Q5TCS8 1911 aa12.29□□□□□ -0.44
RD3-201ENST00000367002 INO80Q9ULG1 1556 aaPredicted RBP12.29□□□□□ -0.44
RD3-201ENST00000367002 FAM187AA6NFU0 413 aa12.29□□□□□ -0.44
RD3-201ENST00000367002 M0QZ92 97 aa12.29□□□□□ -0.44
RD3-201ENST00000367002 ESRRAP11474 423 aaPredicted RBP12.29□□□□□ -0.44
RD3-201ENST00000367002 SLC9A1P19634 815 aa12.29□□□□□ -0.44
RD3-201ENST00000367002 ABCD1P33897 745 aa12.29□□□□□ -0.44
RD3-201ENST00000367002 CARSP49589 748 aaKnown RBP12.29□□□□□ -0.44
RD3-201ENST00000367002 ASPHQ12797 758 aa12.29□□□□□ -0.44
RD3-201ENST00000367002 LRRC14Q15048 493 aa12.29□□□□□ -0.44
RD3-201ENST00000367002 TAF11Q15544 211 aa12.29□□□□□ -0.44
RD3-201ENST00000367002 NTRK3Q16288 839 aa12.29□□□□□ -0.44
RD3-201ENST00000367002 SLFN12LQ6IEE8 588 aa12.29□□□□□ -0.44
RD3-201ENST00000367002 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.29□□□□□ -0.44
RD3-201ENST00000367002 HNRNPLLQ8WVV9 542 aaKnown RBP12.29□□□□□ -0.44
RD3-201ENST00000367002 N4BP2L2Q92802 583 aaPredicted RBP12.29□□□□□ -0.44
RD3-201ENST00000367002 TBC1D22BQ9NU19 505 aa12.29□□□□□ -0.44
RD3-201ENST00000367002 AKT3Q9Y243 479 aa12.29□□□□□ -0.44
RD3-201ENST00000367002 C1orf167Q5SNV9 1468 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms