RNA–Protein interactions for RNA: ENST00000366894.5

PRKN-203, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 1,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-203ENST00000366894 ABHD14A-ACY1A0A1B0GW23 586 aa17.21■□□□□ 0.35
PRKN-203ENST00000366894 POTEMA6NI47 508 aa17.21■□□□□ 0.35
PRKN-203ENST00000366894 PPP6R2O75170 966 aa17.21■□□□□ 0.35
PRKN-203ENST00000366894 DGAT1O75907 488 aa17.21■□□□□ 0.35
PRKN-203ENST00000366894 STBD1O95210 358 aa17.21■□□□□ 0.35
PRKN-203ENST00000366894 YEATS4O95619 227 aa17.21■□□□□ 0.35
PRKN-203ENST00000366894 POLGP54098 1239 aaPredicted RBP17.21■□□□□ 0.35
PRKN-203ENST00000366894 CYP4A11Q02928 519 aa17.21■□□□□ 0.35
PRKN-203ENST00000366894 MTERF2Q49AM1 385 aa17.21■□□□□ 0.35
PRKN-203ENST00000366894 PPP2R2DQ66LE6 453 aa17.21■□□□□ 0.35
PRKN-203ENST00000366894 TMCO2Q7Z6W1 182 aaPredicted RBP17.21■□□□□ 0.35
PRKN-203ENST00000366894 HERC6Q8IVU3 1022 aa17.21■□□□□ 0.35
PRKN-203ENST00000366894 KRI1Q8N9T8 703 aaKnown RBP17.21■□□□□ 0.35
PRKN-203ENST00000366894 RASSF8Q8NHQ8 419 aa17.21■□□□□ 0.35
PRKN-203ENST00000366894 SNX29Q8TEQ0 813 aa17.21■□□□□ 0.35
PRKN-203ENST00000366894 APBB2Q92870 758 aa17.21■□□□□ 0.35
PRKN-203ENST00000366894 SLC9A7Q96T83 725 aa17.21■□□□□ 0.35
PRKN-203ENST00000366894 FAM49AQ9H0Q0 323 aaPredicted RBP17.21■□□□□ 0.35
PRKN-203ENST00000366894 SUGCTQ9HAC7 445 aa17.21■□□□□ 0.35
PRKN-203ENST00000366894 CDY2AQ9Y6F7 541 aa17.21■□□□□ 0.35
PRKN-203ENST00000366894 XIRP2A4UGR9 3374 aa17.21■□□□□ 0.35
PRKN-203ENST00000366894 MAFO75444 373 aaPredicted RBP17.2■□□□□ 0.34
PRKN-203ENST00000366894 C22orf31O95567 290 aa17.2■□□□□ 0.34
PRKN-203ENST00000366894 BRD1O95696 1058 aa17.2■□□□□ 0.34
PRKN-203ENST00000366894 NASPP49321 788 aaPredicted RBP17.2■□□□□ 0.34
PRKN-203ENST00000366894 KRT85P78386 507 aa17.2■□□□□ 0.34
PRKN-203ENST00000366894 MRPS6P82932 125 aaKnown RBP17.2■□□□□ 0.34
PRKN-203ENST00000366894 LPIN1Q14693 890 aa17.2■□□□□ 0.34
PRKN-203ENST00000366894 TARBP2Q15633 366 aaKnown RBP17.2■□□□□ 0.34
PRKN-203ENST00000366894 AAK1Q2M2I8 961 aa17.2■□□□□ 0.34
PRKN-203ENST00000366894 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.2■□□□□ 0.34
PRKN-203ENST00000366894 ANO5Q75V66 913 aa17.2■□□□□ 0.34
PRKN-203ENST00000366894 KIAA0319LQ8IZA0 1049 aa17.2■□□□□ 0.34
PRKN-203ENST00000366894 MICALL1Q8N3F8 863 aa17.2■□□□□ 0.34
PRKN-203ENST00000366894 MCPH1Q8NEM0 835 aa17.2■□□□□ 0.34
PRKN-203ENST00000366894 C1QTNF1Q9BXJ1 281 aa17.2■□□□□ 0.34
PRKN-203ENST00000366894 SCAND2PQ9GZW5 306 aaPredicted RBP17.2■□□□□ 0.34
PRKN-203ENST00000366894 CIZ1Q9ULV3 898 aaPredicted RBP17.2■□□□□ 0.34
PRKN-203ENST00000366894 AKT3Q9Y243 479 aa17.2■□□□□ 0.34
PRKN-203ENST00000366894 PCDHA11Q9Y5I1 949 aa17.2■□□□□ 0.34
PRKN-203ENST00000366894 MICAL3Q7RTP6 2002 aa17.2■□□□□ 0.34
PRKN-203ENST00000366894 SPTLC2O15270 562 aa17.19■□□□□ 0.34
PRKN-203ENST00000366894 ARHGEF15O94989 841 aa17.19■□□□□ 0.34
PRKN-203ENST00000366894 GHRP10912 638 aa17.19■□□□□ 0.34
PRKN-203ENST00000366894 TMEM62Q0P6H9 643 aa17.19■□□□□ 0.34
PRKN-203ENST00000366894 IKBKEQ14164 716 aa17.19■□□□□ 0.34
PRKN-203ENST00000366894 MXD4Q14582 209 aaPredicted RBP17.19■□□□□ 0.34
PRKN-203ENST00000366894 FBXO47Q5MNV8 452 aa17.19■□□□□ 0.34
PRKN-203ENST00000366894 SEPT8Q92599 483 aa17.19■□□□□ 0.34
PRKN-203ENST00000366894 PYM1Q9BRP8 204 aaKnown RBP17.19■□□□□ 0.34
PRKN-203ENST00000366894 CELF4Q9BZC1 486 aaKnown RBP17.19■□□□□ 0.34
PRKN-203ENST00000366894 KIAA1024Q9UPX6 916 aa17.19■□□□□ 0.34
PRKN-203ENST00000366894 CLIC4Q9Y696 253 aa17.19■□□□□ 0.34
PRKN-203ENST00000366894 ARHGEF35A5YM69 484 aa17.18■□□□□ 0.34
PRKN-203ENST00000366894 SPATA31C1P0DKV0 1188 aa17.18■□□□□ 0.34
PRKN-203ENST00000366894 KCNJ6P48051 423 aa17.18■□□□□ 0.34
PRKN-203ENST00000366894 CRYBB1P53674 252 aaPredicted RBP17.18■□□□□ 0.34
PRKN-203ENST00000366894 CEBPZQ03701 1054 aaKnown RBP17.18■□□□□ 0.34
PRKN-203ENST00000366894 NCBP1Q09161 790 aaKnown RBP17.18■□□□□ 0.34
PRKN-203ENST00000366894 PCBP1Q15365 356 aaKnown RBP eCLIP17.18■□□□□ 0.34
PRKN-203ENST00000366894 LINC01465Q8N7H1 131 aa17.18■□□□□ 0.34
PRKN-203ENST00000366894 ZNF579Q8NAF0 562 aaKnown RBP17.18■□□□□ 0.34
PRKN-203ENST00000366894 CEP89Q96ST8 783 aa17.18■□□□□ 0.34
PRKN-203ENST00000366894 MTRQ99707 1265 aa17.18■□□□□ 0.34
PRKN-203ENST00000366894 TIPINQ9BVW5 301 aa17.18■□□□□ 0.34
PRKN-203ENST00000366894 FTHL17Q9BXU8 183 aa17.18■□□□□ 0.34
PRKN-203ENST00000366894 AGO3Q9H9G7 860 aaKnown RBP17.18■□□□□ 0.34
PRKN-203ENST00000366894 KCND2Q9NZV8 630 aa17.18■□□□□ 0.34
PRKN-203ENST00000366894 TRPV2Q9Y5S1 764 aa17.18■□□□□ 0.34
PRKN-203ENST00000366894 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.17■□□□□ 0.34
PRKN-203ENST00000366894 TMEM150BA6NC51 233 aa17.17■□□□□ 0.34
PRKN-203ENST00000366894 GPR182O15218 404 aa17.17■□□□□ 0.34
PRKN-203ENST00000366894 TFDP1Q14186 410 aa17.17■□□□□ 0.34
PRKN-203ENST00000366894 PTPAQ15257 358 aa17.17■□□□□ 0.34
PRKN-203ENST00000366894 SKIV2LQ15477 1246 aaKnown RBP17.17■□□□□ 0.34
PRKN-203ENST00000366894 HYIQ5T013 277 aa17.17■□□□□ 0.34
PRKN-203ENST00000366894 CABP7Q86V35 215 aa17.17■□□□□ 0.34
PRKN-203ENST00000366894 ZNF410Q86VK4 478 aa17.17■□□□□ 0.34
PRKN-203ENST00000366894 LINC00301Q8NCQ3 95 aa17.17■□□□□ 0.34
PRKN-203ENST00000366894 PSPC1Q8WXF1 523 aaKnown RBP17.17■□□□□ 0.34
PRKN-203ENST00000366894 EVPLQ92817 2033 aa17.17■□□□□ 0.34
PRKN-203ENST00000366894 SCLT1Q96NL6 688 aa17.17■□□□□ 0.34
PRKN-203ENST00000366894 NECAB3Q96P71 396 aaPredicted RBP17.17■□□□□ 0.34
PRKN-203ENST00000366894 USP28Q96RU2 1077 aa17.17■□□□□ 0.34
PRKN-203ENST00000366894 IFIH1Q9BYX4 1025 aaKnown RBP17.17■□□□□ 0.34
PRKN-203ENST00000366894 CCSER1Q9C0I3 900 aa17.17■□□□□ 0.34
PRKN-203ENST00000366894 DHX33Q9H6R0 707 aaKnown RBP17.17■□□□□ 0.34
PRKN-203ENST00000366894 CDHR5Q9HBB8 845 aa17.17■□□□□ 0.34
PRKN-203ENST00000366894 ATP6V0A4Q9HBG4 840 aa17.17■□□□□ 0.34
PRKN-203ENST00000366894 SUCLA2Q9P2R7 463 aaPredicted RBP17.17■□□□□ 0.34
PRKN-203ENST00000366894 WRAP73Q9P2S5 460 aaPredicted RBP17.17■□□□□ 0.34
PRKN-203ENST00000366894 REV3LO60673 3130 aa17.16■□□□□ 0.34
PRKN-203ENST00000366894 IGKV6-21A0A0C4DH24 114 aa17.16■□□□□ 0.34
PRKN-203ENST00000366894 CUTAO60888 179 aa17.16■□□□□ 0.34
PRKN-203ENST00000366894 MED24O75448 989 aa17.16■□□□□ 0.34
PRKN-203ENST00000366894 EYA4O95677 639 aa17.16■□□□□ 0.34
PRKN-203ENST00000366894 CA3P07451 260 aa17.16■□□□□ 0.34
PRKN-203ENST00000366894 RARRES1P49788 294 aa17.16■□□□□ 0.34
PRKN-203ENST00000366894 TFF2Q03403 129 aa17.16■□□□□ 0.34
PRKN-203ENST00000366894 CSPP1Q1MSJ5 1256 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms