RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 ATP6V0A1Q93050 837 aa5.77□□□□□ -1.49
CDC42BPA-204ENST00000366767 RTFDC1Q9BY42 306 aaPredicted RBP5.77□□□□□ -1.49
CDC42BPA-204ENST00000366767 FAM129AQ9BZQ8 928 aa5.77□□□□□ -1.49
CDC42BPA-204ENST00000366767 PICK1Q9NRD5 415 aa5.77□□□□□ -1.49
CDC42BPA-204ENST00000366767 TXNDC16Q9P2K2 825 aa5.77□□□□□ -1.49
CDC42BPA-204ENST00000366767 KIF13AQ9H1H9 1805 aa5.77□□□□□ -1.49
CDC42BPA-204ENST00000366767 MYH6P13533 1939 aa5.77□□□□□ -1.49
CDC42BPA-204ENST00000366767 APOEP02649 317 aa5.77□□□□□ -1.49
CDC42BPA-204ENST00000366767 JAK3P52333 1124 aa5.77□□□□□ -1.49
CDC42BPA-204ENST00000366767 NPEPPSP55786 919 aa5.77□□□□□ -1.49
CDC42BPA-204ENST00000366767 DCAF15Q66K64 600 aa5.77□□□□□ -1.49
CDC42BPA-204ENST00000366767 EIF1ADQ8N9N8 165 aaKnown RBP5.77□□□□□ -1.49
CDC42BPA-204ENST00000366767 RDH13Q8NBN7 331 aa5.77□□□□□ -1.49
CDC42BPA-204ENST00000366767 RILPQ96NA2 401 aa5.77□□□□□ -1.49
CDC42BPA-204ENST00000366767 CSRNP1Q96S65 589 aa5.77□□□□□ -1.49
CDC42BPA-204ENST00000366767 POLR3CQ9BUI4 534 aaPredicted RBP5.77□□□□□ -1.49
CDC42BPA-204ENST00000366767 ANGPTL2Q9UKU9 493 aa5.77□□□□□ -1.49
CDC42BPA-204ENST00000366767 CCPG1Q9ULG6 757 aa5.77□□□□□ -1.49
CDC42BPA-204ENST00000366767 LDHAP00338 332 aaKnown RBP5.77□□□□□ -1.49
CDC42BPA-204ENST00000366767 ATICP31939 592 aa5.77□□□□□ -1.49
CDC42BPA-204ENST00000366767 HADHQ16836 314 aaKnown RBP5.77□□□□□ -1.49
CDC42BPA-204ENST00000366767 SFR1Q86XK3 245 aa5.77□□□□□ -1.49
CDC42BPA-204ENST00000366767 ARHGAP18Q8N392 663 aa5.77□□□□□ -1.49
CDC42BPA-204ENST00000366767 FGD4Q96M96 766 aa5.77□□□□□ -1.49
CDC42BPA-204ENST00000366767 FMO2Q99518 471 aa5.77□□□□□ -1.49
CDC42BPA-204ENST00000366767 DNAJC12Q9UKB3 198 aa5.77□□□□□ -1.49
CDC42BPA-204ENST00000366767 SYNPO2Q9UMS6 1093 aa5.77□□□□□ -1.49
CDC42BPA-204ENST00000366767 SRGAP2O75044 1071 aa5.77□□□□□ -1.49
CDC42BPA-204ENST00000366767 KRT10P13645 584 aa5.77□□□□□ -1.49
CDC42BPA-204ENST00000366767 MYBPC2Q14324 1141 aa5.77□□□□□ -1.49
CDC42BPA-204ENST00000366767 ARHGEF16Q5VV41 709 aa5.77□□□□□ -1.49
CDC42BPA-204ENST00000366767 PARP9Q8IXQ6 854 aa5.77□□□□□ -1.49
CDC42BPA-204ENST00000366767 MIS12Q9H081 205 aa5.77□□□□□ -1.49
CDC42BPA-204ENST00000366767 MRPL46Q9H2W6 279 aaKnown RBP5.77□□□□□ -1.49
CDC42BPA-204ENST00000366767 hCG_2014768A0A024R1R8 64 aa5.77□□□□□ -1.49
CDC42BPA-204ENST00000366767 RASSF10A6NK89 507 aa5.77□□□□□ -1.49
CDC42BPA-204ENST00000366767 MYCLP12524 364 aaPredicted RBP5.77□□□□□ -1.49
CDC42BPA-204ENST00000366767 SURF1Q15526 300 aa5.77□□□□□ -1.49
CDC42BPA-204ENST00000366767 ADGRA1Q86SQ6 560 aa5.77□□□□□ -1.49
CDC42BPA-204ENST00000366767 RFFLQ8WZ73 363 aa5.77□□□□□ -1.49
CDC42BPA-204ENST00000366767 STK33Q9BYT3 514 aa5.77□□□□□ -1.49
CDC42BPA-204ENST00000366767 DPH5Q9H2P9 285 aa5.77□□□□□ -1.49
CDC42BPA-204ENST00000366767 MLXIPQ9HAP2 919 aa5.77□□□□□ -1.49
CDC42BPA-204ENST00000366767 FAM205AQ6ZU69 1335 aa5.77□□□□□ -1.49
CDC42BPA-204ENST00000366767 FECHP22830 423 aa5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 POLR2BP30876 1174 aaKnown RBP5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 ESRRGP62508 458 aa5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 PLCB3Q01970 1234 aa5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 DRP2Q13474 957 aa5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 NIM1KQ8IY84 436 aa5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 RTKN2Q8IZC4 609 aa5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 DACT3Q96B18 629 aaPredicted RBP5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 ANLNQ9NQW6 1124 aa5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 ZNF711Q9Y462 761 aa5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 FAM169AQ9Y6X4 670 aa5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 CLIC2O15247 247 aa5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 CXCR5P32302 372 aa5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 ARL1P40616 181 aaPredicted RBP5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 LIG4P49917 911 aa5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 COL9A3Q14050 684 aaPredicted RBP5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 LGSNQ5TDP6 509 aa5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 KCTD16Q68DU8 428 aa5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 HIBCHQ6NVY1 386 aaPredicted RBP5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 CCDC13Q8IYE1 715 aa5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 KLHL29Q96CT2 875 aa5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 MAP3K20Q9NYL2 800 aaKnown RBP5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 A0A0A6YYK5 440 aaPredicted RBP5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 DDX39AO00148 427 aaKnown RBP5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 PJA2O43164 708 aa5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 SFNP31947 248 aa5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 HERVK_113P62684 666 aa5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 Q4G0T1 1027 aa5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 EARS2Q5JPH6 523 aaKnown RBP5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 FAM102BQ5T8I3 360 aa5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 ZNF507Q8TCN5 953 aa5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 EEF2KMTQ96G04 330 aa5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 EIF2AK1Q9BQI3 630 aaKnown RBP5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 WNT8AQ9H1J5 351 aa5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 NRBP2Q9NSY0 501 aa5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 RAB20Q9NX57 234 aa5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 POTEB3A0JP26 581 aa5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 PABPN1LA6NDY0 278 aaKnown RBP5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 POTECB2RU33 542 aa5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 ANKRD65E5RJM6 399 aa5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 MYO1FO00160 1098 aa5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 APBA3O96018 575 aa5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 LMNAP02545 664 aaKnown RBP5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 ASNSP08243 561 aa5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 SCP2P22307 547 aa5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 CHRNA3P32297 505 aa5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 ELF1P32519 619 aa5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 PHBP35232 272 aa5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 DR1Q01658 176 aa5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 ACTN3Q08043 901 aaPredicted RBP5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 POTEBQ6S5H4 581 aa5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 DEPTORQ8TB45 409 aa5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 EPC1Q9H2F5 836 aa5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 ZNF142P52746 1687 aaPredicted RBP5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 KCPQ6ZWJ8 1503 aa5.76□□□□□ -1.49
CDC42BPA-204ENST00000366767 UBE2Q2LH0YL09 131 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms