RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 MPLP40238 635 aa0.74□□□□□ -2.29
RNU6-54P-201ENST00000365563 MMP13P45452 471 aa0.74□□□□□ -2.29
RNU6-54P-201ENST00000365563 RARRES1P49788 294 aa0.74□□□□□ -2.29
RNU6-54P-201ENST00000365563 ZNF134P52741 427 aa0.74□□□□□ -2.29
RNU6-54P-201ENST00000365563 KRTAP10-8P60410 259 aa0.74□□□□□ -2.29
RNU6-54P-201ENST00000365563 MRPS35P82673 323 aaKnown RBP0.74□□□□□ -2.29
RNU6-54P-201ENST00000365563 MAP3K12Q12852 859 aa0.74□□□□□ -2.29
RNU6-54P-201ENST00000365563 TUSC3Q13454 348 aa0.74□□□□□ -2.29
RNU6-54P-201ENST00000365563 SAFB2Q14151 953 aaKnown RBP eCLIP0.74□□□□□ -2.29
RNU6-54P-201ENST00000365563 SEMA3AQ14563 771 aa0.74□□□□□ -2.29
RNU6-54P-201ENST00000365563 GAGE13Q4V321 117 aa0.74□□□□□ -2.29
RNU6-54P-201ENST00000365563 SLC44A4Q53GD3 710 aa0.74□□□□□ -2.29
RNU6-54P-201ENST00000365563 C9orf50Q5SZB4 431 aa0.74□□□□□ -2.29
RNU6-54P-201ENST00000365563 TMEM200BQ69YZ2 307 aa0.74□□□□□ -2.29
RNU6-54P-201ENST00000365563 GK5Q6ZS86 529 aa0.74□□□□□ -2.29
RNU6-54P-201ENST00000365563 GDF7Q7Z4P5 450 aa0.74□□□□□ -2.29
RNU6-54P-201ENST00000365563 BRAPQ7Z569 592 aa0.74□□□□□ -2.29
RNU6-54P-201ENST00000365563 APBB1IPQ7Z5R6 666 aaPredicted RBP0.74□□□□□ -2.29
RNU6-54P-201ENST00000365563 PNPLA5Q7Z6Z6 429 aaPredicted RBP0.74□□□□□ -2.29
RNU6-54P-201ENST00000365563 SYT12Q8IV01 421 aa0.74□□□□□ -2.29
RNU6-54P-201ENST00000365563 ADHFE1Q8IWW8 467 aa0.74□□□□□ -2.29
RNU6-54P-201ENST00000365563 ELOA2Q8IYF1 753 aaPredicted RBP0.74□□□□□ -2.29
RNU6-54P-201ENST00000365563 ARHGEF39Q8N4T4 335 aa0.74□□□□□ -2.29
RNU6-54P-201ENST00000365563 RBMXL3Q8N7X1 1067 aaKnown RBP0.74□□□□□ -2.29
RNU6-54P-201ENST00000365563 FBXO27Q8NI29 283 aa0.74□□□□□ -2.29
RNU6-54P-201ENST00000365563 GCDHQ92947 438 aaPredicted RBP0.74□□□□□ -2.29
RNU6-54P-201ENST00000365563 ZNF428Q96B54 188 aa0.74□□□□□ -2.29
RNU6-54P-201ENST00000365563 LYZL4Q96KX0 146 aa0.74□□□□□ -2.29
RNU6-54P-201ENST00000365563 TM9SF2Q99805 663 aa0.74□□□□□ -2.29
RNU6-54P-201ENST00000365563 ZNF768Q9H5H4 540 aaKnown RBP0.74□□□□□ -2.29
RNU6-54P-201ENST00000365563 IL23AQ9NPF7 189 aa0.74□□□□□ -2.29
RNU6-54P-201ENST00000365563 FAM86C1Q9NVL1 165 aa0.74□□□□□ -2.29
RNU6-54P-201ENST00000365563 TRPM5Q9NZQ8 1165 aa0.74□□□□□ -2.29
RNU6-54P-201ENST00000365563 RNF181Q9P0P0 153 aa0.74□□□□□ -2.29
RNU6-54P-201ENST00000365563 BIN2Q9UBW5 565 aaPredicted RBP0.74□□□□□ -2.29
RNU6-54P-201ENST00000365563 CDC42EP3Q9UKI2 254 aa0.74□□□□□ -2.29
RNU6-54P-201ENST00000365563 BTBD3Q9Y2F9 522 aa0.74□□□□□ -2.29
RNU6-54P-201ENST00000365563 AK5Q9Y6K8 562 aa0.74□□□□□ -2.29
RNU6-54P-201ENST00000365563 ARHGEF17Q96PE2 2063 aaPredicted RBP0.73□□□□□ -2.29
RNU6-54P-201ENST00000365563 UBE2QL1A1L167 161 aa0.73□□□□□ -2.29
RNU6-54P-201ENST00000365563 FAM90A10PA6NDY2 464 aa0.73□□□□□ -2.29
RNU6-54P-201ENST00000365563 DIRC3C9JPN6 131 aa0.73□□□□□ -2.29
RNU6-54P-201ENST00000365563 F6X3S4 739 aa0.73□□□□□ -2.29
RNU6-54P-201ENST00000365563 SUPT5HO00267 1087 aaKnown RBP0.73□□□□□ -2.29
RNU6-54P-201ENST00000365563 CBFA2T2O43439 604 aa0.73□□□□□ -2.29
RNU6-54P-201ENST00000365563 TBC1D4O60343 1298 aa0.73□□□□□ -2.29
RNU6-54P-201ENST00000365563 NCR1O76036 304 aa0.73□□□□□ -2.29
RNU6-54P-201ENST00000365563 OAZ2O95190 189 aa0.73□□□□□ -2.29
RNU6-54P-201ENST00000365563 CGAP01215 116 aa0.73□□□□□ -2.29
RNU6-54P-201ENST00000365563 CD1AP06126 327 aa0.73□□□□□ -2.29
RNU6-54P-201ENST00000365563 LDHBP07195 334 aaKnown RBP0.73□□□□□ -2.29
RNU6-54P-201ENST00000365563 NAT2P11245 290 aa0.73□□□□□ -2.29
RNU6-54P-201ENST00000365563 ITPKBP27987 946 aa0.73□□□□□ -2.29
RNU6-54P-201ENST00000365563 MCM4P33991 863 aa0.73□□□□□ -2.29
RNU6-54P-201ENST00000365563 CRKP46108 304 aa0.73□□□□□ -2.29
RNU6-54P-201ENST00000365563 NPEPPSP55786 919 aa0.73□□□□□ -2.29
RNU6-54P-201ENST00000365563 KRTAP10-1P60331 282 aa0.73□□□□□ -2.29
RNU6-54P-201ENST00000365563 KRTAP10-3P60369 221 aa0.73□□□□□ -2.29
RNU6-54P-201ENST00000365563 IL13RA1P78552 427 aa0.73□□□□□ -2.29
RNU6-54P-201ENST00000365563 CLCQ05315 142 aa0.73□□□□□ -2.29
RNU6-54P-201ENST00000365563 SPIRE1Q08AE8 756 aa0.73□□□□□ -2.29
RNU6-54P-201ENST00000365563 DBPQ10586 325 aaPredicted RBP0.73□□□□□ -2.29
RNU6-54P-201ENST00000365563 GRM1Q13255 1194 aa0.73□□□□□ -2.29
RNU6-54P-201ENST00000365563 ERV3-1Q14264 604 aa0.73□□□□□ -2.29
RNU6-54P-201ENST00000365563 SF3B4Q15427 424 aaKnown RBP eCLIP0.73□□□□□ -2.29
RNU6-54P-201ENST00000365563 STILQ15468 1287 aa0.73□□□□□ -2.29
RNU6-54P-201ENST00000365563 BEAN1Q3B7T3 259 aa0.73□□□□□ -2.29
RNU6-54P-201ENST00000365563 METTL24Q5JXM2 366 aa0.73□□□□□ -2.29
RNU6-54P-201ENST00000365563 LCE1CQ5T751 118 aa0.73□□□□□ -2.29
RNU6-54P-201ENST00000365563 LCE1BQ5T7P3 118 aa0.73□□□□□ -2.29
RNU6-54P-201ENST00000365563 PXDC1Q5TGL8 231 aa0.73□□□□□ -2.29
RNU6-54P-201ENST00000365563 MEI1Q5TIA1 1274 aa0.73□□□□□ -2.29
RNU6-54P-201ENST00000365563 C1QL3Q5VWW1 255 aa0.73□□□□□ -2.29
RNU6-54P-201ENST00000365563 KRT40Q6A162 431 aa0.73□□□□□ -2.29
RNU6-54P-201ENST00000365563 HIST2H2BCQ6DN03 193 aa0.73□□□□□ -2.29
RNU6-54P-201ENST00000365563 KLHDC10Q6PID8 442 aa0.73□□□□□ -2.29
RNU6-54P-201ENST00000365563 CXorf67Q86X51 503 aaPredicted RBP0.73□□□□□ -2.29
RNU6-54P-201ENST00000365563 KRT73Q86Y46 540 aa0.73□□□□□ -2.29
RNU6-54P-201ENST00000365563 GLB1L3Q8NCI6 653 aaPredicted RBP0.73□□□□□ -2.29
RNU6-54P-201ENST00000365563 CPEB3Q8NE35 698 aaKnown RBP0.73□□□□□ -2.29
RNU6-54P-201ENST00000365563 UHMK1Q8TAS1 419 aaKnown RBP0.73□□□□□ -2.29
RNU6-54P-201ENST00000365563 NPLOC4Q8TAT6 608 aa0.73□□□□□ -2.29
RNU6-54P-201ENST00000365563 PIP4K2CQ8TBX8 421 aa0.73□□□□□ -2.29
RNU6-54P-201ENST00000365563 ACTRT2Q8TDY3 377 aa0.73□□□□□ -2.29
RNU6-54P-201ENST00000365563 CLEC4DQ8WXI8 215 aa0.73□□□□□ -2.29
RNU6-54P-201ENST00000365563 GFM2Q969S9 779 aaKnown RBP0.73□□□□□ -2.29
RNU6-54P-201ENST00000365563 WBP2Q969T9 261 aa0.73□□□□□ -2.29
RNU6-54P-201ENST00000365563 SARAFQ96BY9 339 aa0.73□□□□□ -2.29
RNU6-54P-201ENST00000365563 THOC3Q96J01 351 aaKnown RBP0.73□□□□□ -2.29
RNU6-54P-201ENST00000365563 ZNF512Q96ME7 567 aaPredicted RBP0.73□□□□□ -2.29
RNU6-54P-201ENST00000365563 SH2D3AQ9BRG2 576 aa0.73□□□□□ -2.29
RNU6-54P-201ENST00000365563 TRMOQ9BU70 441 aa0.73□□□□□ -2.29
RNU6-54P-201ENST00000365563 RSRP1Q9BUV0 290 aa0.73□□□□□ -2.29
RNU6-54P-201ENST00000365563 KLHL25Q9H0H3 589 aa0.73□□□□□ -2.29
RNU6-54P-201ENST00000365563 ALG13Q9NP73 1137 aaKnown RBP0.73□□□□□ -2.29
RNU6-54P-201ENST00000365563 SLC39A2Q9NP94 309 aa0.73□□□□□ -2.29
RNU6-54P-201ENST00000365563 GPRC5CQ9NQ84 441 aa0.73□□□□□ -2.29
RNU6-54P-201ENST00000365563 INCENPQ9NQS7 918 aa0.73□□□□□ -2.29
RNU6-54P-201ENST00000365563 ASB6Q9NWX5 421 aa0.73□□□□□ -2.29
RNU6-54P-201ENST00000365563 TMEM260Q9NX78 707 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms