RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 SH2D3AQ9BRG2 576 aa24.7■■□□□ 1.55
LDB1-201ENST00000361198 RNF146Q9NTX7 359 aa24.7■■□□□ 1.55
LDB1-201ENST00000361198 RNF216Q9NWF9 866 aaPredicted RBP24.7■■□□□ 1.55
LDB1-201ENST00000361198 RLFQ13129 1914 aa24.7■■□□□ 1.54
LDB1-201ENST00000361198 BAATQ14032 418 aaPredicted RBP24.7■■□□□ 1.54
LDB1-201ENST00000361198 SLC18A3Q16572 532 aa24.7■■□□□ 1.54
LDB1-201ENST00000361198 ARHGEF16Q5VV41 709 aa24.7■■□□□ 1.54
LDB1-201ENST00000361198 CCNI2Q6ZMN8 369 aaPredicted RBP24.7■■□□□ 1.54
LDB1-201ENST00000361198 MMGT1Q8N4V1 131 aa24.7■■□□□ 1.54
LDB1-201ENST00000361198 CAGE1Q8TC20 777 aa24.7■■□□□ 1.54
LDB1-201ENST00000361198 DRC1Q96MC2 740 aa24.7■■□□□ 1.54
LDB1-201ENST00000361198 SPAG5Q96R06 1193 aa24.7■■□□□ 1.54
LDB1-201ENST00000361198 SIX2Q9NPC8 291 aa24.7■■□□□ 1.54
LDB1-201ENST00000361198 GCNT4Q9P109 453 aa24.7■■□□□ 1.54
LDB1-201ENST00000361198 ADAMTS1Q9UHI8 967 aa24.7■■□□□ 1.54
LDB1-201ENST00000361198 PNMA2Q9UL42 364 aa24.7■■□□□ 1.54
LDB1-201ENST00000361198 COL11A1P12107 1806 aaPredicted RBP24.7■■□□□ 1.54
LDB1-201ENST00000361198 A0A087X0T9 212 aa24.69■■□□□ 1.54
LDB1-201ENST00000361198 FAM228BP0C875 321 aa24.69■■□□□ 1.54
LDB1-201ENST00000361198 PLS1Q14651 629 aa24.69■■□□□ 1.54
LDB1-201ENST00000361198 IRF2BP2Q7Z5L9 587 aa24.69■■□□□ 1.54
LDB1-201ENST00000361198 MKNK1Q9BUB5 465 aa24.69■■□□□ 1.54
LDB1-201ENST00000361198 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP24.69■■□□□ 1.54
LDB1-201ENST00000361198 DMAC2Q9NW81 257 aa24.69■■□□□ 1.54
LDB1-201ENST00000361198 DBR1Q9UK59 544 aaKnown RBP24.69■■□□□ 1.54
LDB1-201ENST00000361198 HPCAL4Q9UM19 191 aa24.69■■□□□ 1.54
LDB1-201ENST00000361198 TESPA1A2RU30 521 aaPredicted RBP24.69■■□□□ 1.54
LDB1-201ENST00000361198 CYP2J2P51589 502 aa24.69■■□□□ 1.54
LDB1-201ENST00000361198 UGCGQ16739 394 aa24.69■■□□□ 1.54
LDB1-201ENST00000361198 REPS2Q8NFH8 660 aa24.69■■□□□ 1.54
LDB1-201ENST00000361198 RBM46Q8TBY0 533 aaKnown RBP24.69■■□□□ 1.54
LDB1-201ENST00000361198 TMEM150BA6NC51 233 aa24.68■■□□□ 1.54
LDB1-201ENST00000361198 PPP1R12BO60237 982 aaPredicted RBP24.68■■□□□ 1.54
LDB1-201ENST00000361198 RPS6KA5O75582 802 aa24.68■■□□□ 1.54
LDB1-201ENST00000361198 SYF2O95926 243 aaKnown RBP24.68■■□□□ 1.54
LDB1-201ENST00000361198 CCDC125Q86Z20 511 aa24.68■■□□□ 1.54
LDB1-201ENST00000361198 APOBEC3FQ8IUX4 373 aaKnown RBP24.68■■□□□ 1.54
LDB1-201ENST00000361198 RUBCNQ92622 972 aa24.68■■□□□ 1.54
LDB1-201ENST00000361198 AJAP1Q9UKB5 411 aaPredicted RBP24.68■■□□□ 1.54
LDB1-201ENST00000361198 GTPBP10A4D1E9 387 aaKnown RBP24.68■■□□□ 1.54
LDB1-201ENST00000361198 K7ENM7 598 aa24.68■■□□□ 1.54
LDB1-201ENST00000361198 BUB1O43683 1085 aa24.68■■□□□ 1.54
LDB1-201ENST00000361198 LYPLA2O95372 231 aa24.68■■□□□ 1.54
LDB1-201ENST00000361198 YWHABP31946 246 aaKnown RBP24.68■■□□□ 1.54
LDB1-201ENST00000361198 TRMT1LQ7Z2T5 733 aaKnown RBP24.68■■□□□ 1.54
LDB1-201ENST00000361198 NLGN2Q8NFZ4 835 aa24.68■■□□□ 1.54
LDB1-201ENST00000361198 ALS2CR12Q96Q35 445 aa24.68■■□□□ 1.54
LDB1-201ENST00000361198 LARSQ9P2J5 1176 aaKnown RBP24.68■■□□□ 1.54
LDB1-201ENST00000361198 CCNE2O96020 404 aa24.67■■□□□ 1.54
LDB1-201ENST00000361198 PTK2Q05397 1052 aa24.67■■□□□ 1.54
LDB1-201ENST00000361198 SNRNP48Q6IEG0 339 aaKnown RBP24.67■■□□□ 1.54
LDB1-201ENST00000361198 FBXL5Q9UKA1 691 aa24.67■■□□□ 1.54
LDB1-201ENST00000361198 TCP1P17987 556 aaKnown RBP24.66■■□□□ 1.54
LDB1-201ENST00000361198 GJB7Q6PEY0 223 aa24.66■■□□□ 1.54
LDB1-201ENST00000361198 SYCP3Q8IZU3 236 aa24.66■■□□□ 1.54
LDB1-201ENST00000361198 C12orf42Q96LP6 360 aa24.66■■□□□ 1.54
LDB1-201ENST00000361198 FRMD4BQ9Y2L6 1034 aa24.66■■□□□ 1.54
LDB1-201ENST00000361198 CAPN2P17655 700 aa24.66■■□□□ 1.54
LDB1-201ENST00000361198 DSG3P32926 999 aa24.66■■□□□ 1.54
LDB1-201ENST00000361198 ZNF571Q7Z3V5 609 aaPredicted RBP24.66■■□□□ 1.54
LDB1-201ENST00000361198 RNF10Q8N5U6 811 aaKnown RBP24.66■■□□□ 1.54
LDB1-201ENST00000361198 KLRG1Q96E93 195 aa24.66■■□□□ 1.54
LDB1-201ENST00000361198 GGA3Q9NZ52 723 aa24.66■■□□□ 1.54
LDB1-201ENST00000361198 ZNF214Q9UL59 606 aaPredicted RBP24.66■■□□□ 1.54
LDB1-201ENST00000361198 PHIPQ8WWQ0 1821 aa24.66■■□□□ 1.54
LDB1-201ENST00000361198 MYBL2P10244 700 aa24.65■■□□□ 1.54
LDB1-201ENST00000361198 C2orf54Q08AI8 447 aa24.65■■□□□ 1.54
LDB1-201ENST00000361198 C4orf19Q8IY42 314 aa24.65■■□□□ 1.54
LDB1-201ENST00000361198 NOX5Q96PH1 765 aa24.65■■□□□ 1.54
LDB1-201ENST00000361198 LUC7LQ9NQ29 371 aaKnown RBP24.65■■□□□ 1.54
LDB1-201ENST00000361198 ADAMTS5Q9UNA0 930 aa24.65■■□□□ 1.54
LDB1-201ENST00000361198 ZMYND10O75800 440 aa24.65■■□□□ 1.54
LDB1-201ENST00000361198 FMO5P49326 533 aa24.65■■□□□ 1.54
LDB1-201ENST00000361198 CCDC70Q6NSX1 233 aa24.65■■□□□ 1.54
LDB1-201ENST00000361198 VSIG10LQ86VR7 867 aa24.65■■□□□ 1.54
LDB1-201ENST00000361198 OSBPL9Q96SU4 736 aa24.65■■□□□ 1.54
LDB1-201ENST00000361198 PACSIN1Q9BY11 444 aa24.65■■□□□ 1.54
LDB1-201ENST00000361198 GPRC5DQ9NZD1 345 aa24.65■■□□□ 1.54
LDB1-201ENST00000361198 BACH1O14867 736 aa24.64■■□□□ 1.54
LDB1-201ENST00000361198 RNF40O75150 1001 aa24.64■■□□□ 1.54
LDB1-201ENST00000361198 PHACTR2O75167 634 aa24.64■■□□□ 1.54
LDB1-201ENST00000361198 NR3C2P08235 984 aa24.64■■□□□ 1.54
LDB1-201ENST00000361198 KLRC1P26715 233 aa24.64■■□□□ 1.54
LDB1-201ENST00000361198 TNNT3P45378 269 aaPredicted RBP24.64■■□□□ 1.54
LDB1-201ENST00000361198 NAP1L1P55209 391 aaKnown RBP24.64■■□□□ 1.54
LDB1-201ENST00000361198 JAM2P57087 298 aa24.64■■□□□ 1.54
LDB1-201ENST00000361198 SLC9A9Q8IVB4 645 aa24.64■■□□□ 1.54
LDB1-201ENST00000361198 SPATA4Q8NEY3 305 aa24.64■■□□□ 1.54
LDB1-201ENST00000361198 SELENOOQ9BVL4 669 aa24.64■■□□□ 1.54
LDB1-201ENST00000361198 CWC15Q9P013 229 aaKnown RBP24.64■■□□□ 1.54
LDB1-201ENST00000361198 HYOU1Q9Y4L1 999 aa24.64■■□□□ 1.54
LDB1-201ENST00000361198 WDR64B1ANS9 1081 aa24.64■■□□□ 1.53
LDB1-201ENST00000361198 C19orf81C9J6K1 198 aa24.64■■□□□ 1.53
LDB1-201ENST00000361198 EXOC3O60645 756 aa24.64■■□□□ 1.53
LDB1-201ENST00000361198 TRIM49P0CI25 452 aa24.64■■□□□ 1.53
LDB1-201ENST00000361198 TRIM49CP0CI26 452 aa24.64■■□□□ 1.53
LDB1-201ENST00000361198 PLS3P13797 630 aa24.64■■□□□ 1.53
LDB1-201ENST00000361198 JAK3P52333 1124 aa24.64■■□□□ 1.53
LDB1-201ENST00000361198 PSMC5P62195 406 aa24.64■■□□□ 1.53
LDB1-201ENST00000361198 TMEM132BQ14DG7 1078 aa24.64■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms