RNA–Protein interactions for RNA: ENST00000361055.8

UBA3-202, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene UBA3, Length 2,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-202ENST00000361055 RANBP17Q9H2T7 1088 aaKnown RBP13.55□□□□□ -0.24
UBA3-202ENST00000361055 PLEKHA4Q9H4M7 779 aa13.55□□□□□ -0.24
UBA3-202ENST00000361055 TBC1D7Q9P0N9 293 aa13.55□□□□□ -0.24
UBA3-202ENST00000361055 PPP1R9AQ9ULJ8 1098 aa13.55□□□□□ -0.24
UBA3-202ENST00000361055 NFU1Q9UMS0 254 aa13.55□□□□□ -0.24
UBA3-202ENST00000361055 TRAF3IP3Q9Y228 551 aa13.55□□□□□ -0.24
UBA3-202ENST00000361055 USP17L15C9J2P7 530 aa13.54□□□□□ -0.24
UBA3-202ENST00000361055 USP17L13C9JLJ4 530 aa13.54□□□□□ -0.24
UBA3-202ENST00000361055 USP17L11C9JVI0 530 aa13.54□□□□□ -0.24
UBA3-202ENST00000361055 USP17L18D6R9N7 530 aa13.54□□□□□ -0.24
UBA3-202ENST00000361055 USP17L22D6RA61 530 aa13.54□□□□□ -0.24
UBA3-202ENST00000361055 USP17L17D6RBQ6 530 aa13.54□□□□□ -0.24
UBA3-202ENST00000361055 USP17L19D6RCP7 530 aa13.54□□□□□ -0.24
UBA3-202ENST00000361055 USP17L20D6RJB6 530 aa13.54□□□□□ -0.24
UBA3-202ENST00000361055 FTCDO95954 541 aa13.54□□□□□ -0.24
UBA3-202ENST00000361055 FDX1P10109 184 aa13.54□□□□□ -0.24
UBA3-202ENST00000361055 MYBP10242 640 aa13.54□□□□□ -0.24
UBA3-202ENST00000361055 ANXA13P27216 316 aa13.54□□□□□ -0.24
UBA3-202ENST00000361055 GJA5P36382 358 aa13.54□□□□□ -0.24
UBA3-202ENST00000361055 TNNC1P63316 161 aa13.54□□□□□ -0.24
UBA3-202ENST00000361055 USP17L24Q0WX57 530 aa13.54□□□□□ -0.24
UBA3-202ENST00000361055 SNAPC2Q13487 334 aa13.54□□□□□ -0.24
UBA3-202ENST00000361055 ARSHQ5FYA8 562 aa13.54□□□□□ -0.24
UBA3-202ENST00000361055 DPY19L2P1Q6NXN4 242 aa13.54□□□□□ -0.24
UBA3-202ENST00000361055 CATSPERGQ6ZRH7 1159 aa13.54□□□□□ -0.24
UBA3-202ENST00000361055 FASTKD5Q7L8L6 764 aaKnown RBP13.54□□□□□ -0.24
UBA3-202ENST00000361055 USP38Q8NB14 1042 aa13.54□□□□□ -0.24
UBA3-202ENST00000361055 WNK4Q96J92 1243 aa13.54□□□□□ -0.24
UBA3-202ENST00000361055 GRIN2DO15399 1336 aa13.54□□□□□ -0.24
UBA3-202ENST00000361055 MYH10P35580 1976 aa13.54□□□□□ -0.24
UBA3-202ENST00000361055 CCT5P48643 541 aa13.54□□□□□ -0.24
UBA3-202ENST00000361055 SLC12A3P55017 1021 aa13.54□□□□□ -0.24
UBA3-202ENST00000361055 TRAF1Q13077 416 aa13.54□□□□□ -0.24
UBA3-202ENST00000361055 RPS6KA1Q15418 735 aa13.54□□□□□ -0.24
UBA3-202ENST00000361055 TTC31Q49AM3 519 aaPredicted RBP13.54□□□□□ -0.24
UBA3-202ENST00000361055 MCTP2Q6DN12 878 aa13.54□□□□□ -0.24
UBA3-202ENST00000361055 GADL1Q6ZQY3 521 aa13.54□□□□□ -0.24
UBA3-202ENST00000361055 SAPCD2Q86UD0 394 aa13.54□□□□□ -0.24
UBA3-202ENST00000361055 IFT81Q8WYA0 676 aa13.54□□□□□ -0.24
UBA3-202ENST00000361055 TAF4BQ92750 862 aa13.54□□□□□ -0.24
UBA3-202ENST00000361055 KRT12Q99456 494 aa13.54□□□□□ -0.24
UBA3-202ENST00000361055 AMNQ9BXJ7 453 aa13.54□□□□□ -0.24
UBA3-202ENST00000361055 STK24Q9Y6E0 443 aa13.54□□□□□ -0.24
UBA3-202ENST00000361055 COL11A1P12107 1806 aaPredicted RBP13.54□□□□□ -0.24
UBA3-202ENST00000361055 FAM153BP0C7A2 387 aa13.53□□□□□ -0.24
UBA3-202ENST00000361055 ZBTB48P10074 688 aaPredicted RBP13.53□□□□□ -0.24
UBA3-202ENST00000361055 NOP2P46087 812 aaKnown RBP13.53□□□□□ -0.24
UBA3-202ENST00000361055 COG2Q14746 738 aa13.53□□□□□ -0.24
UBA3-202ENST00000361055 FAM153CQ494X1 144 aa13.53□□□□□ -0.24
UBA3-202ENST00000361055 SAMD1Q6SPF0 538 aaPredicted RBP13.53□□□□□ -0.24
UBA3-202ENST00000361055 FBXO11Q86XK2 927 aa13.53□□□□□ -0.24
UBA3-202ENST00000361055 FAM133AQ8N9E0 248 aa13.53□□□□□ -0.24
UBA3-202ENST00000361055 ZNF784Q8NCA9 323 aaPredicted RBP13.53□□□□□ -0.24
UBA3-202ENST00000361055 CASKIN2Q8WXE0 1202 aa13.53□□□□□ -0.24
UBA3-202ENST00000361055 PIK3R5Q8WYR1 880 aa13.53□□□□□ -0.24
UBA3-202ENST00000361055 GJA10Q969M2 543 aa13.53□□□□□ -0.24
UBA3-202ENST00000361055 CCDC43Q96MW1 224 aaKnown RBP13.53□□□□□ -0.24
UBA3-202ENST00000361055 FAM153AQ9UHL3 310 aa13.53□□□□□ -0.24
UBA3-202ENST00000361055 SMCHD1A6NHR9 2005 aa13.53□□□□□ -0.24
UBA3-202ENST00000361055 ATP8B3O60423 1300 aa13.53□□□□□ -0.24
UBA3-202ENST00000361055 MYPNQ86TC9 1320 aa13.53□□□□□ -0.24
UBA3-202ENST00000361055 NPHP3-ACAD11A0A0J9YXS1 232 aa13.52□□□□□ -0.24
UBA3-202ENST00000361055 ZNF233A6NK53 670 aa13.52□□□□□ -0.24
UBA3-202ENST00000361055 TBX3O15119 743 aa13.52□□□□□ -0.24
UBA3-202ENST00000361055 KRT18P05783 430 aaKnown RBP13.52□□□□□ -0.24
UBA3-202ENST00000361055 SNAP25P60880 206 aa13.52□□□□□ -0.24
UBA3-202ENST00000361055 FSTL1Q12841 308 aa13.52□□□□□ -0.24
UBA3-202ENST00000361055 TREML2Q5T2D2 321 aa13.52□□□□□ -0.24
UBA3-202ENST00000361055 KDM7AQ6ZMT4 941 aa13.52□□□□□ -0.24
UBA3-202ENST00000361055 B4GALNT4Q76KP1 1039 aa13.52□□□□□ -0.24
UBA3-202ENST00000361055 ACTRT1Q8TDG2 376 aa13.52□□□□□ -0.24
UBA3-202ENST00000361055 SCFD2Q8WU76 684 aa13.52□□□□□ -0.24
UBA3-202ENST00000361055 ARMCX3Q9UH62 379 aaPredicted RBP13.52□□□□□ -0.24
UBA3-202ENST00000361055 FBXL5Q9UKA1 691 aa13.52□□□□□ -0.24
UBA3-202ENST00000361055 AGTPBP1Q9UPW5 1226 aa13.52□□□□□ -0.24
UBA3-202ENST00000361055 PCDHA1Q9Y5I3 950 aa13.52□□□□□ -0.24
UBA3-202ENST00000361055 POTEB3A0JP26 581 aa13.52□□□□□ -0.25
UBA3-202ENST00000361055 PDXKO00764 312 aa13.52□□□□□ -0.25
UBA3-202ENST00000361055 ZEB2O60315 1214 aa13.52□□□□□ -0.25
UBA3-202ENST00000361055 MED24O75448 989 aa13.52□□□□□ -0.25
UBA3-202ENST00000361055 NR2F2P24468 414 aa13.52□□□□□ -0.25
UBA3-202ENST00000361055 DSG3P32926 999 aa13.52□□□□□ -0.25
UBA3-202ENST00000361055 HSPA9P38646 679 aaKnown RBP13.52□□□□□ -0.25
UBA3-202ENST00000361055 PRKCIP41743 596 aa13.52□□□□□ -0.25
UBA3-202ENST00000361055 GTF2A2P52657 109 aa13.52□□□□□ -0.25
UBA3-202ENST00000361055 ARID5AQ03989 594 aa13.52□□□□□ -0.25
UBA3-202ENST00000361055 PTK2Q05397 1052 aa13.52□□□□□ -0.25
UBA3-202ENST00000361055 MOGSQ13724 837 aa13.52□□□□□ -0.25
UBA3-202ENST00000361055 GIT2Q14161 759 aa13.52□□□□□ -0.25
UBA3-202ENST00000361055 KNOP1Q1ED39 458 aaKnown RBP13.52□□□□□ -0.25
UBA3-202ENST00000361055 SPRYD7Q5W111 196 aa13.52□□□□□ -0.25
UBA3-202ENST00000361055 POTEBQ6S5H4 581 aa13.52□□□□□ -0.25
UBA3-202ENST00000361055 EPM2AIP1Q7L775 607 aaPredicted RBP13.52□□□□□ -0.25
UBA3-202ENST00000361055 TADA2BQ86TJ2 420 aa13.52□□□□□ -0.25
UBA3-202ENST00000361055 SPATS2Q86XZ4 545 aaKnown RBP13.52□□□□□ -0.25
UBA3-202ENST00000361055 SYT2Q8N9I0 419 aaPredicted RBP13.52□□□□□ -0.25
UBA3-202ENST00000361055 LMBR1Q8WVP7 490 aa13.52□□□□□ -0.25
UBA3-202ENST00000361055 PACSIN1Q9BY11 444 aa13.52□□□□□ -0.25
UBA3-202ENST00000361055 ISCUQ9H1K1 167 aa13.52□□□□□ -0.25
UBA3-202ENST00000361055 SLC38A10Q9HBR0 1119 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms