RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 PDIA2Q13087 525 aaKnown RBP14.29□□□□□ -0.12
CCDC144A-203ENST00000360495 ACBD5Q5T8D3 534 aaPredicted RBP14.29□□□□□ -0.12
CCDC144A-203ENST00000360495 SLFN13Q68D06 897 aa14.29□□□□□ -0.12
CCDC144A-203ENST00000360495 CCDC137Q6PK04 289 aaKnown RBP14.29□□□□□ -0.12
CCDC144A-203ENST00000360495 CALR3Q96L12 384 aaKnown RBP14.29□□□□□ -0.12
CCDC144A-203ENST00000360495 NACC1Q96RE7 527 aa14.29□□□□□ -0.12
CCDC144A-203ENST00000360495 ZNF577Q9BSK1 485 aa14.29□□□□□ -0.12
CCDC144A-203ENST00000360495 SLC13A1Q9BZW2 595 aa14.29□□□□□ -0.12
CCDC144A-203ENST00000360495 CLEC11AQ9Y240 323 aa14.29□□□□□ -0.12
CCDC144A-203ENST00000360495 ATP2B4P23634 1241 aa14.29□□□□□ -0.12
CCDC144A-203ENST00000360495 PRAMEP78395 509 aa14.29□□□□□ -0.12
CCDC144A-203ENST00000360495 CCZ1BP86790 482 aa14.29□□□□□ -0.12
CCDC144A-203ENST00000360495 CCZ1P86791 482 aaPredicted RBP14.29□□□□□ -0.12
CCDC144A-203ENST00000360495 CDC37Q16543 378 aaPredicted RBP14.29□□□□□ -0.12
CCDC144A-203ENST00000360495 MDH1BQ5I0G3 518 aa14.29□□□□□ -0.12
CCDC144A-203ENST00000360495 TRAPPC3LQ5T215 181 aa14.29□□□□□ -0.12
CCDC144A-203ENST00000360495 ARHGEF10O15013 1369 aa14.29□□□□□ -0.12
CCDC144A-203ENST00000360495 PMLP29590 882 aa14.29□□□□□ -0.12
CCDC144A-203ENST00000360495 DNAL1Q4LDG9 190 aa14.29□□□□□ -0.12
CCDC144A-203ENST00000360495 PRPF38AQ8NAV1 312 aaKnown RBP14.29□□□□□ -0.12
CCDC144A-203ENST00000360495 TTC13Q8NBP0 860 aa14.29□□□□□ -0.12
CCDC144A-203ENST00000360495 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.29□□□□□ -0.12
CCDC144A-203ENST00000360495 AMNQ9BXJ7 453 aa14.29□□□□□ -0.12
CCDC144A-203ENST00000360495 IRX2Q9BZI1 471 aaPredicted RBP14.29□□□□□ -0.12
CCDC144A-203ENST00000360495 NXF1Q9UBU9 619 aaKnown RBP14.29□□□□□ -0.12
CCDC144A-203ENST00000360495 SEPT9Q9UHD8 586 aaPredicted RBP14.29□□□□□ -0.12
CCDC144A-203ENST00000360495 AMACRQ9UHK6 382 aa14.29□□□□□ -0.12
CCDC144A-203ENST00000360495 MFSD14BQ5SR56 506 aa14.29□□□□□ -0.12
CCDC144A-203ENST00000360495 CLEC17AQ6ZS10 378 aa14.29□□□□□ -0.12
CCDC144A-203ENST00000360495 NRBP2Q9NSY0 501 aa14.29□□□□□ -0.12
CCDC144A-203ENST00000360495 AURKCQ9UQB9 309 aa14.29□□□□□ -0.12
CCDC144A-203ENST00000360495 TEX14Q8IWB6 1497 aa14.29□□□□□ -0.12
CCDC144A-203ENST00000360495 WDR47O94967 919 aa14.28□□□□□ -0.12
CCDC144A-203ENST00000360495 PHKA1P46020 1223 aa14.28□□□□□ -0.12
CCDC144A-203ENST00000360495 CCNI2Q6ZMN8 369 aaPredicted RBP14.28□□□□□ -0.12
CCDC144A-203ENST00000360495 ATP6V0A1Q93050 837 aa14.28□□□□□ -0.12
CCDC144A-203ENST00000360495 ERP27Q96DN0 273 aa14.28□□□□□ -0.12
CCDC144A-203ENST00000360495 ALG13Q9NP73 1137 aaKnown RBP14.28□□□□□ -0.12
CCDC144A-203ENST00000360495 UBN1Q9NPG3 1134 aa14.28□□□□□ -0.12
CCDC144A-203ENST00000360495 PRCPP42785 496 aa14.28□□□□□ -0.12
CCDC144A-203ENST00000360495 DHX34Q14147 1143 aaKnown RBP14.28□□□□□ -0.12
CCDC144A-203ENST00000360495 SPDYE1Q8NFV5 336 aaPredicted RBP14.28□□□□□ -0.12
CCDC144A-203ENST00000360495 HOOK2Q96ED9 719 aa14.28□□□□□ -0.12
CCDC144A-203ENST00000360495 SNX12Q9UMY4 172 aa14.28□□□□□ -0.12
CCDC144A-203ENST00000360495 ZNF185O15231 689 aa14.28□□□□□ -0.12
CCDC144A-203ENST00000360495 TFAMQ00059 246 aaKnown RBP14.28□□□□□ -0.12
CCDC144A-203ENST00000360495 ICA1Q05084 483 aa14.28□□□□□ -0.12
CCDC144A-203ENST00000360495 BTKQ06187 659 aa14.28□□□□□ -0.12
CCDC144A-203ENST00000360495 ASPRV1Q53RT3 343 aa14.28□□□□□ -0.12
CCDC144A-203ENST00000360495 CDR2LQ86X02 465 aaPredicted RBP14.28□□□□□ -0.12
CCDC144A-203ENST00000360495 ERICH1Q86X53 443 aa14.28□□□□□ -0.12
CCDC144A-203ENST00000360495 ATP11CQ8NB49 1132 aa14.28□□□□□ -0.12
CCDC144A-203ENST00000360495 C10orf88Q9H8K7 445 aa14.28□□□□□ -0.12
CCDC144A-203ENST00000360495 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.28□□□□□ -0.12
CCDC144A-203ENST00000360495 CCT8L1PA6NM43 557 aa14.28□□□□□ -0.12
CCDC144A-203ENST00000360495 FAM83BQ5T0W9 1011 aa14.28□□□□□ -0.12
CCDC144A-203ENST00000360495 LRRC8BQ6P9F7 803 aa14.28□□□□□ -0.12
CCDC144A-203ENST00000360495 CYB5D1Q6P9G0 228 aa14.28□□□□□ -0.12
CCDC144A-203ENST00000360495 DNAJC10Q8IXB1 793 aa14.28□□□□□ -0.12
CCDC144A-203ENST00000360495 STAG2Q8N3U4 1231 aa14.28□□□□□ -0.12
CCDC144A-203ENST00000360495 OLFML3Q9NRN5 406 aa14.28□□□□□ -0.12
CCDC144A-203ENST00000360495 KCNQ3O43525 872 aa14.28□□□□□ -0.12
CCDC144A-203ENST00000360495 PDE5AO76074 875 aa14.28□□□□□ -0.12
CCDC144A-203ENST00000360495 ANP32DO95626 131 aa14.28□□□□□ -0.12
CCDC144A-203ENST00000360495 PRR29P0C7W0 189 aa14.28□□□□□ -0.12
CCDC144A-203ENST00000360495 VCAM1P19320 739 aa14.28□□□□□ -0.12
CCDC144A-203ENST00000360495 KCNJ6P48051 423 aa14.28□□□□□ -0.12
CCDC144A-203ENST00000360495 GPS1Q13098 491 aa14.28□□□□□ -0.12
CCDC144A-203ENST00000360495 GRM1Q13255 1194 aa14.28□□□□□ -0.12
CCDC144A-203ENST00000360495 TRIP10Q15642 601 aa14.28□□□□□ -0.12
CCDC144A-203ENST00000360495 UNC13DQ70J99 1090 aa14.28□□□□□ -0.12
CCDC144A-203ENST00000360495 PLD3Q8IV08 490 aa14.28□□□□□ -0.12
CCDC144A-203ENST00000360495 ZNF579Q8NAF0 562 aaKnown RBP14.28□□□□□ -0.12
CCDC144A-203ENST00000360495 CCDC134Q9H6E4 229 aa14.28□□□□□ -0.12
CCDC144A-203ENST00000360495 GPR108Q9NPR9 543 aa14.28□□□□□ -0.12
CCDC144A-203ENST00000360495 GID8Q9NWU2 228 aa14.28□□□□□ -0.12
CCDC144A-203ENST00000360495 ADAM22Q9P0K1 906 aa14.28□□□□□ -0.12
CCDC144A-203ENST00000360495 PITPNM2Q9BZ72 1349 aa14.27□□□□□ -0.12
CCDC144A-203ENST00000360495 SYCP2Q9BX26 1530 aa14.27□□□□□ -0.12
CCDC144A-203ENST00000360495 IGF2BP3O00425 579 aaKnown RBP eCLIP14.27□□□□□ -0.12
CCDC144A-203ENST00000360495 MARK3P27448 753 aa14.27□□□□□ -0.12
CCDC144A-203ENST00000360495 SERPINB1P30740 379 aa14.27□□□□□ -0.12
CCDC144A-203ENST00000360495 CDO1Q16878 200 aa14.27□□□□□ -0.12
CCDC144A-203ENST00000360495 NAIF1Q69YI7 327 aaPredicted RBP14.27□□□□□ -0.12
CCDC144A-203ENST00000360495 TRAF7Q6Q0C0 670 aa14.27□□□□□ -0.12
CCDC144A-203ENST00000360495 RSRC2Q7L4I2 434 aaKnown RBP14.27□□□□□ -0.12
CCDC144A-203ENST00000360495 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.27□□□□□ -0.12
CCDC144A-203ENST00000360495 PBXIP1Q96AQ6 731 aa14.27□□□□□ -0.12
CCDC144A-203ENST00000360495 RPS6KC1Q96S38 1066 aa14.27□□□□□ -0.12
CCDC144A-203ENST00000360495 WDR11Q9BZH6 1224 aa14.27□□□□□ -0.12
CCDC144A-203ENST00000360495 TRABDQ9H4I3 376 aa14.27□□□□□ -0.12
CCDC144A-203ENST00000360495 NPHS2Q9NP85 383 aa14.27□□□□□ -0.12
CCDC144A-203ENST00000360495 PDP2Q9P2J9 529 aa14.27□□□□□ -0.12
CCDC144A-203ENST00000360495 SEC24CP53992 1094 aa14.27□□□□□ -0.12
CCDC144A-203ENST00000360495 UBXN2AP68543 259 aa14.27□□□□□ -0.12
CCDC144A-203ENST00000360495 STAT4Q14765 748 aa14.27□□□□□ -0.12
CCDC144A-203ENST00000360495 PIGSQ96S52 555 aa14.27□□□□□ -0.12
CCDC144A-203ENST00000360495 SENP1Q9P0U3 644 aa14.27□□□□□ -0.12
CCDC144A-203ENST00000360495 S100A5P33763 92 aa14.27□□□□□ -0.13
CCDC144A-203ENST00000360495 CERKLQ49MI3 558 aaPredicted RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms