RNA–Protein interactions for RNA: ENST00000360439.8

SIN3A-201, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 5,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-201ENST00000360439 TUBA8Q9NY65 449 aaPredicted RBP10.71□□□□□ -0.7
SIN3A-201ENST00000360439 GMNNO75496 209 aa10.7□□□□□ -0.7
SIN3A-201ENST00000360439 ORC2Q13416 577 aaPredicted RBP10.7□□□□□ -0.7
SIN3A-201ENST00000360439 CASP8Q14790 479 aa10.7□□□□□ -0.7
SIN3A-201ENST00000360439 TBC1D1Q86TI0 1168 aaPredicted RBP10.7□□□□□ -0.7
SIN3A-201ENST00000360439 FAM133AQ8N9E0 248 aa10.7□□□□□ -0.7
SIN3A-201ENST00000360439 RPAP3Q9H6T3 665 aaPredicted RBP10.7□□□□□ -0.7
SIN3A-201ENST00000360439 PPME1Q9Y570 386 aa10.7□□□□□ -0.7
SIN3A-201ENST00000360439 PDHBP11177 359 aa10.7□□□□□ -0.7
SIN3A-201ENST00000360439 EIF2AK2P19525 551 aaKnown RBP10.7□□□□□ -0.7
SIN3A-201ENST00000360439 NFIAQ12857 509 aa10.7□□□□□ -0.7
SIN3A-201ENST00000360439 C12orf60Q5U649 245 aa10.7□□□□□ -0.7
SIN3A-201ENST00000360439 TC2NQ8N9U0 490 aa10.7□□□□□ -0.7
SIN3A-201ENST00000360439 GSDMBQ8TAX9 411 aa10.7□□□□□ -0.7
SIN3A-201ENST00000360439 ZNF180Q9UJW8 692 aa10.7□□□□□ -0.7
SIN3A-201ENST00000360439 KDM1AO60341 852 aa10.7□□□□□ -0.7
SIN3A-201ENST00000360439 HOXA13P31271 388 aaPredicted RBP10.7□□□□□ -0.7
SIN3A-201ENST00000360439 RAB27AP51159 221 aa10.7□□□□□ -0.7
SIN3A-201ENST00000360439 TBL3Q12788 808 aaKnown RBP10.7□□□□□ -0.7
SIN3A-201ENST00000360439 MTMR3Q13615 1198 aa10.7□□□□□ -0.7
SIN3A-201ENST00000360439 NCAPHQ15003 741 aa10.7□□□□□ -0.7
SIN3A-201ENST00000360439 THOC7Q6I9Y2 204 aaKnown RBP10.7□□□□□ -0.7
SIN3A-201ENST00000360439 MSANTD4Q8NCY6 345 aa10.7□□□□□ -0.7
SIN3A-201ENST00000360439 RAET1EQ8TD07 263 aa10.7□□□□□ -0.7
SIN3A-201ENST00000360439 DPF2Q92785 391 aa10.7□□□□□ -0.7
SIN3A-201ENST00000360439 IFT74Q96LB3 600 aa10.7□□□□□ -0.7
SIN3A-201ENST00000360439 CARD9Q9H257 536 aa10.7□□□□□ -0.7
SIN3A-201ENST00000360439 PRKAG2Q9UGJ0 569 aa10.7□□□□□ -0.7
SIN3A-201ENST00000360439 ZBED6P86452 979 aa10.69□□□□□ -0.7
SIN3A-201ENST00000360439 HDLBPQ00341 1268 aaKnown RBP10.69□□□□□ -0.7
SIN3A-201ENST00000360439 CROCCP2Q86T23 111 aa10.69□□□□□ -0.7
SIN3A-201ENST00000360439 CLEC10AQ8IUN9 316 aa10.69□□□□□ -0.7
SIN3A-201ENST00000360439 RBM46Q8TBY0 533 aaKnown RBP10.69□□□□□ -0.7
SIN3A-201ENST00000360439 LRRC45Q96CN5 670 aa10.69□□□□□ -0.7
SIN3A-201ENST00000360439 LMCD1Q9NZU5 365 aa10.69□□□□□ -0.7
SIN3A-201ENST00000360439 STIM2Q9P246 746 aa10.69□□□□□ -0.7
SIN3A-201ENST00000360439 GPR75-ASB3A0A0A6YYF3 556 aa10.69□□□□□ -0.7
SIN3A-201ENST00000360439 WTIPA6NIX2 430 aaPredicted RBP10.69□□□□□ -0.7
SIN3A-201ENST00000360439 B3GALNT1O75752 331 aa10.69□□□□□ -0.7
SIN3A-201ENST00000360439 FOSP01100 380 aaPredicted RBP10.69□□□□□ -0.7
SIN3A-201ENST00000360439 ARL1P40616 181 aaPredicted RBP10.69□□□□□ -0.7
SIN3A-201ENST00000360439 NR5A1Q13285 461 aa10.69□□□□□ -0.7
SIN3A-201ENST00000360439 MB21D1Q8N884 522 aa10.69□□□□□ -0.7
SIN3A-201ENST00000360439 VPS37AQ8NEZ2 397 aa10.69□□□□□ -0.7
SIN3A-201ENST00000360439 SPOCK3Q9BQ16 436 aa10.69□□□□□ -0.7
SIN3A-201ENST00000360439 SUGCTQ9HAC7 445 aa10.69□□□□□ -0.7
SIN3A-201ENST00000360439 SAMD15Q9P1V8 674 aa10.69□□□□□ -0.7
SIN3A-201ENST00000360439 USP17L15C9J2P7 530 aa10.69□□□□□ -0.7
SIN3A-201ENST00000360439 USP17L13C9JLJ4 530 aa10.69□□□□□ -0.7
SIN3A-201ENST00000360439 USP17L11C9JVI0 530 aa10.69□□□□□ -0.7
SIN3A-201ENST00000360439 USP17L18D6R9N7 530 aa10.69□□□□□ -0.7
SIN3A-201ENST00000360439 USP17L22D6RA61 530 aa10.69□□□□□ -0.7
SIN3A-201ENST00000360439 USP17L17D6RBQ6 530 aa10.69□□□□□ -0.7
SIN3A-201ENST00000360439 USP17L19D6RCP7 530 aa10.69□□□□□ -0.7
SIN3A-201ENST00000360439 USP17L20D6RJB6 530 aa10.69□□□□□ -0.7
SIN3A-201ENST00000360439 APOEP02649 317 aa10.69□□□□□ -0.7
SIN3A-201ENST00000360439 NFKBIAP25963 317 aa10.69□□□□□ -0.7
SIN3A-201ENST00000360439 USP17L24Q0WX57 530 aa10.69□□□□□ -0.7
SIN3A-201ENST00000360439 PREPLQ4J6C6 727 aaPredicted RBP10.69□□□□□ -0.7
SIN3A-201ENST00000360439 NBPF12Q5TAG4 269 aaPredicted RBP10.69□□□□□ -0.7
SIN3A-201ENST00000360439 NT5DC1Q5TFE4 455 aa10.69□□□□□ -0.7
SIN3A-201ENST00000360439 RNF207Q6ZRF8 634 aa10.69□□□□□ -0.7
SIN3A-201ENST00000360439 RBM12BQ8IXT5 1001 aaKnown RBP10.69□□□□□ -0.7
SIN3A-201ENST00000360439 TTC16Q8NEE8 873 aa10.69□□□□□ -0.7
SIN3A-201ENST00000360439 RASGRP4Q8TDF6 673 aa10.69□□□□□ -0.7
SIN3A-201ENST00000360439 EPAS1Q99814 870 aa10.69□□□□□ -0.7
SIN3A-201ENST00000360439 ABCB6Q9NP58 842 aa10.69□□□□□ -0.7
SIN3A-201ENST00000360439 HAUS2Q9NVX0 235 aa10.69□□□□□ -0.7
SIN3A-201ENST00000360439 MOSPD1Q9UJG1 213 aa10.69□□□□□ -0.7
SIN3A-201ENST00000360439 POTEFA5A3E0 1075 aa10.69□□□□□ -0.7
SIN3A-201ENST00000360439 LRRIQ3A6PVS8 624 aaPredicted RBP10.69□□□□□ -0.7
SIN3A-201ENST00000360439 LGALS16A8MUM7 142 aa10.69□□□□□ -0.7
SIN3A-201ENST00000360439 STXBP3O00186 592 aa10.69□□□□□ -0.7
SIN3A-201ENST00000360439 AHCYL1O43865 530 aa10.69□□□□□ -0.7
SIN3A-201ENST00000360439 EPHB4P54760 987 aa10.69□□□□□ -0.7
SIN3A-201ENST00000360439 TAF12Q16514 161 aa10.69□□□□□ -0.7
SIN3A-201ENST00000360439 Q3C1V9 767 aa10.69□□□□□ -0.7
SIN3A-201ENST00000360439 KCTD16Q68DU8 428 aa10.69□□□□□ -0.7
SIN3A-201ENST00000360439 TMTC3Q6ZXV5 915 aa10.69□□□□□ -0.7
SIN3A-201ENST00000360439 FAXDC2Q96IV6 333 aa10.69□□□□□ -0.7
SIN3A-201ENST00000360439 NSRP1Q9H0G5 558 aaKnown RBP10.69□□□□□ -0.7
SIN3A-201ENST00000360439 ZFYVE28Q9HCC9 887 aa10.69□□□□□ -0.7
SIN3A-201ENST00000360439 KDM3AQ9Y4C1 1321 aa10.69□□□□□ -0.7
SIN3A-201ENST00000360439 ABCC6O95255 1503 aa10.69□□□□□ -0.7
SIN3A-201ENST00000360439 LINC00854A0A1B0GVQ3 168 aa10.68□□□□□ -0.7
SIN3A-201ENST00000360439 FAM170AA1A519 330 aa10.68□□□□□ -0.7
SIN3A-201ENST00000360439 OR52Z1P0C646 297 aa10.68□□□□□ -0.7
SIN3A-201ENST00000360439 MSL3P1P0C860 447 aa10.68□□□□□ -0.7
SIN3A-201ENST00000360439 GRAMD1CQ8IYS0 662 aa10.68□□□□□ -0.7
SIN3A-201ENST00000360439 FAM9CQ8IZT9 166 aa10.68□□□□□ -0.7
SIN3A-201ENST00000360439 XAB2Q9HCS7 855 aaKnown RBP10.68□□□□□ -0.7
SIN3A-201ENST00000360439 FEM1BQ9UK73 627 aa10.68□□□□□ -0.7
SIN3A-201ENST00000360439 ATP8A1Q9Y2Q0 1164 aa10.68□□□□□ -0.7
SIN3A-201ENST00000360439 TRIM17Q9Y577 477 aa10.68□□□□□ -0.7
SIN3A-201ENST00000360439 ADM5C9JUS6 153 aa10.68□□□□□ -0.7
SIN3A-201ENST00000360439 WDR46O15213 610 aaKnown RBP10.68□□□□□ -0.7
SIN3A-201ENST00000360439 DNA2P51530 1060 aa10.68□□□□□ -0.7
SIN3A-201ENST00000360439 SMTNP53814 917 aa10.68□□□□□ -0.7
SIN3A-201ENST00000360439 ALS2CLQ60I27 953 aa10.68□□□□□ -0.7
SIN3A-201ENST00000360439 HS2ST1Q7LGA3 356 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms