RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 NBPF26B4DH59 902 aa9.89□□□□□ -0.83
VPS13A-203ENST00000360280 M0R3G1 203 aa9.89□□□□□ -0.83
VPS13A-203ENST00000360280 FOXP2O15409 715 aa9.89□□□□□ -0.83
VPS13A-203ENST00000360280 ASAP2O43150 1006 aa9.89□□□□□ -0.83
VPS13A-203ENST00000360280 RALBP11234 206 aa9.89□□□□□ -0.83
VPS13A-203ENST00000360280 GGCXP38435 758 aa9.89□□□□□ -0.83
VPS13A-203ENST00000360280 FOXD4Q12950 439 aaPredicted RBP9.89□□□□□ -0.83
VPS13A-203ENST00000360280 RNF219Q5W0B1 726 aaPredicted RBP9.89□□□□□ -0.83
VPS13A-203ENST00000360280 NBPF15Q8N660 670 aa9.89□□□□□ -0.83
VPS13A-203ENST00000360280 OTULINQ96BN8 352 aa9.89□□□□□ -0.83
VPS13A-203ENST00000360280 USP28Q96RU2 1077 aa9.89□□□□□ -0.83
VPS13A-203ENST00000360280 PRPF18Q99633 342 aaKnown RBP9.89□□□□□ -0.83
VPS13A-203ENST00000360280 ABCB6Q9NP58 842 aa9.89□□□□□ -0.83
VPS13A-203ENST00000360280 ADD3Q9UEY8 706 aaKnown RBP9.89□□□□□ -0.83
VPS13A-203ENST00000360280 PYCARDQ9ULZ3 195 aa9.89□□□□□ -0.83
VPS13A-203ENST00000360280 TERB1Q8NA31 727 aa9.89□□□□□ -0.83
VPS13A-203ENST00000360280 SH3GL1Q99961 368 aa9.89□□□□□ -0.83
VPS13A-203ENST00000360280 BRD8Q9H0E9 1235 aa9.89□□□□□ -0.83
VPS13A-203ENST00000360280 UHRF1BP1LA0JNW5 1464 aa9.89□□□□□ -0.83
VPS13A-203ENST00000360280 CLASP1Q7Z460 1538 aa9.89□□□□□ -0.83
VPS13A-203ENST00000360280 KLRF2D3W0D1 207 aa9.89□□□□□ -0.83
VPS13A-203ENST00000360280 ZBTB7BO15156 539 aaPredicted RBP9.89□□□□□ -0.83
VPS13A-203ENST00000360280 GPATCH4Q5T3I0 446 aaKnown RBP9.89□□□□□ -0.83
VPS13A-203ENST00000360280 SARM1Q6SZW1 724 aa9.89□□□□□ -0.83
VPS13A-203ENST00000360280 HPCAL4Q9UM19 191 aa9.89□□□□□ -0.83
VPS13A-203ENST00000360280 FRMPD2Q68DX3 1309 aaPredicted RBP9.89□□□□□ -0.83
VPS13A-203ENST00000360280 hCG_1642624A0A1W2PR95 340 aa9.89□□□□□ -0.83
VPS13A-203ENST00000360280 NFIBO00712 420 aa9.89□□□□□ -0.83
VPS13A-203ENST00000360280 GFPT2O94808 682 aa9.89□□□□□ -0.83
VPS13A-203ENST00000360280 HSPA13P48723 471 aa9.89□□□□□ -0.83
VPS13A-203ENST00000360280 RBBP7Q16576 425 aa9.89□□□□□ -0.83
VPS13A-203ENST00000360280 TRIM69Q86WT6 500 aa9.89□□□□□ -0.83
VPS13A-203ENST00000360280 HSPH1Q92598 858 aa9.89□□□□□ -0.83
VPS13A-203ENST00000360280 IFT43Q96FT9 208 aa9.89□□□□□ -0.83
VPS13A-203ENST00000360280 EIF2S1P05198 315 aaKnown RBP9.89□□□□□ -0.83
VPS13A-203ENST00000360280 USE1Q9NZ43 259 aa9.89□□□□□ -0.83
VPS13A-203ENST00000360280 FANCBQ8NB91 859 aa9.89□□□□□ -0.83
VPS13A-203ENST00000360280 TBL3Q12788 808 aaKnown RBP9.89□□□□□ -0.83
VPS13A-203ENST00000360280 CYTH1Q15438 398 aa9.89□□□□□ -0.83
VPS13A-203ENST00000360280 SIKE1Q9BRV8 207 aa9.89□□□□□ -0.83
VPS13A-203ENST00000360280 DCTN4Q9UJW0 460 aa9.89□□□□□ -0.83
VPS13A-203ENST00000360280 SYNMO15061 1565 aa9.89□□□□□ -0.83
VPS13A-203ENST00000360280 CLK1P49759 484 aaKnown RBP9.89□□□□□ -0.83
VPS13A-203ENST00000360280 FAM180AQ6UWF9 173 aa9.89□□□□□ -0.83
VPS13A-203ENST00000360280 RSPH1Q8WYR4 309 aa9.89□□□□□ -0.83
VPS13A-203ENST00000360280 EME1Q96AY2 570 aa9.89□□□□□ -0.83
VPS13A-203ENST00000360280 CDHR1Q96JP9 859 aa9.89□□□□□ -0.83
VPS13A-203ENST00000360280 AP1M1Q9BXS5 423 aa9.89□□□□□ -0.83
VPS13A-203ENST00000360280 KLHL8Q9P2G9 620 aaPredicted RBP9.89□□□□□ -0.83
VPS13A-203ENST00000360280 ARHGAP31Q2M1Z3 1444 aa9.89□□□□□ -0.83
VPS13A-203ENST00000360280 GUCA1CO95843 209 aa9.89□□□□□ -0.83
VPS13A-203ENST00000360280 PGM1P36871 562 aa9.89□□□□□ -0.83
VPS13A-203ENST00000360280 MRPS35P82673 323 aaKnown RBP9.89□□□□□ -0.83
VPS13A-203ENST00000360280 TRIP4Q15650 581 aaPredicted RBP9.89□□□□□ -0.83
VPS13A-203ENST00000360280 NLRP9Q7RTR0 991 aa9.89□□□□□ -0.83
VPS13A-203ENST00000360280 TOM1O60784 492 aa9.89□□□□□ -0.83
VPS13A-203ENST00000360280 SEC24DO94855 1032 aaPredicted RBP9.89□□□□□ -0.83
VPS13A-203ENST00000360280 SLC39A14Q15043 492 aa9.89□□□□□ -0.83
VPS13A-203ENST00000360280 WWP1Q9H0M0 922 aa9.89□□□□□ -0.83
VPS13A-203ENST00000360280 BLMP54132 1417 aaPredicted RBP9.89□□□□□ -0.83
VPS13A-203ENST00000360280 HSPA9P38646 679 aaKnown RBP9.89□□□□□ -0.83
VPS13A-203ENST00000360280 NLRP11P59045 1033 aaKnown RBP9.89□□□□□ -0.83
VPS13A-203ENST00000360280 TIMM10P62072 90 aa9.89□□□□□ -0.83
VPS13A-203ENST00000360280 GEMIN8Q9NWZ8 242 aaKnown RBP9.89□□□□□ -0.83
VPS13A-203ENST00000360280 COL17A1Q9UMD9 1497 aaPredicted RBP9.88□□□□□ -0.83
VPS13A-203ENST00000360280 CHRNA2Q15822 529 aa9.88□□□□□ -0.83
VPS13A-203ENST00000360280 ALKBH8Q96BT7 664 aaKnown RBP9.88□□□□□ -0.83
VPS13A-203ENST00000360280 ZMYND8Q9ULU4 1186 aaPredicted RBP9.88□□□□□ -0.83
VPS13A-203ENST00000360280 FTOQ9C0B1 505 aaKnown RBP eCLIP9.88□□□□□ -0.83
VPS13A-203ENST00000360280 PMS2P54278 862 aa9.88□□□□□ -0.83
VPS13A-203ENST00000360280 SNF8Q96H20 258 aa9.88□□□□□ -0.83
VPS13A-203ENST00000360280 WDR11Q9BZH6 1224 aa9.88□□□□□ -0.83
VPS13A-203ENST00000360280 ZNF839A8K0R7 811 aa9.88□□□□□ -0.83
VPS13A-203ENST00000360280 CSTF3Q12996 717 aaKnown RBP9.88□□□□□ -0.83
VPS13A-203ENST00000360280 ZNF790Q6PG37 636 aa9.88□□□□□ -0.83
VPS13A-203ENST00000360280 ATP11CQ8NB49 1132 aa9.88□□□□□ -0.83
VPS13A-203ENST00000360280 CYGBQ8WWM9 190 aa9.88□□□□□ -0.83
VPS13A-203ENST00000360280 RNF26Q9BY78 433 aaPredicted RBP9.88□□□□□ -0.83
VPS13A-203ENST00000360280 ARHGEF3Q9NR81 526 aa9.88□□□□□ -0.83
VPS13A-203ENST00000360280 CCDC195A0A1B0GUA6 201 aa9.88□□□□□ -0.83
VPS13A-203ENST00000360280 LRRC31Q6UY01 552 aa9.88□□□□□ -0.83
VPS13A-203ENST00000360280 TOGARAM2Q6ZUX3 1019 aa9.88□□□□□ -0.83
VPS13A-203ENST00000360280 ANKS3Q6ZW76 656 aa9.88□□□□□ -0.83
VPS13A-203ENST00000360280 DDIASQ8IXT1 998 aa9.88□□□□□ -0.83
VPS13A-203ENST00000360280 PSMA4P25789 261 aaKnown RBP9.88□□□□□ -0.83
VPS13A-203ENST00000360280 ASPRV1Q53RT3 343 aa9.88□□□□□ -0.83
VPS13A-203ENST00000360280 NLRP4Q96MN2 994 aa9.88□□□□□ -0.83
VPS13A-203ENST00000360280 RHOBTB1O94844 696 aa9.88□□□□□ -0.83
VPS13A-203ENST00000360280 KIAA1841Q6NSI8 718 aa9.88□□□□□ -0.83
VPS13A-203ENST00000360280 CCDC134Q9H6E4 229 aa9.88□□□□□ -0.83
VPS13A-203ENST00000360280 MBD2Q9UBB5 411 aa9.88□□□□□ -0.83
VPS13A-203ENST00000360280 AASDHQ4L235 1098 aaPredicted RBP9.88□□□□□ -0.83
VPS13A-203ENST00000360280 MFSD14BQ5SR56 506 aa9.88□□□□□ -0.83
VPS13A-203ENST00000360280 OLFML3Q9NRN5 406 aa9.88□□□□□ -0.83
VPS13A-203ENST00000360280 PI4K2BG5E9Z4 385 aa9.88□□□□□ -0.83
VPS13A-203ENST00000360280 RNMTO43148 476 aaKnown RBP9.88□□□□□ -0.83
VPS13A-203ENST00000360280 CHRNA3P32297 505 aa9.88□□□□□ -0.83
VPS13A-203ENST00000360280 NAALADL2Q58DX5 795 aa9.88□□□□□ -0.83
VPS13A-203ENST00000360280 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.88□□□□□ -0.83
VPS13A-203ENST00000360280 ZNF577Q9BSK1 485 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms