RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 INTS2Q9H0H0 1204 aaKnown RBP13.24□□□□□ -0.29
COL20A1-201ENST00000358894 VIPAS39Q9H9C1 493 aa13.24□□□□□ -0.29
COL20A1-201ENST00000358894 PLCB1Q9NQ66 1216 aa13.24□□□□□ -0.29
COL20A1-201ENST00000358894 EMSYQ7Z589 1322 aa13.23□□□□□ -0.29
COL20A1-201ENST00000358894 EVI5O60447 810 aa13.23□□□□□ -0.29
COL20A1-201ENST00000358894 HIP1RO75146 1068 aa13.23□□□□□ -0.29
COL20A1-201ENST00000358894 ASNSP08243 561 aa13.23□□□□□ -0.29
COL20A1-201ENST00000358894 MAPK4P31152 587 aa13.23□□□□□ -0.29
COL20A1-201ENST00000358894 GALCP54803 685 aa13.23□□□□□ -0.29
COL20A1-201ENST00000358894 SATB1Q01826 763 aa13.23□□□□□ -0.29
COL20A1-201ENST00000358894 MTMR1Q13613 665 aa13.23□□□□□ -0.29
COL20A1-201ENST00000358894 GLG1Q92896 1179 aa13.23□□□□□ -0.29
COL20A1-201ENST00000358894 SAAL1Q96ER3 474 aa13.23□□□□□ -0.29
COL20A1-201ENST00000358894 EIF4E1BA6NMX2 242 aaKnown RBP13.23□□□□□ -0.29
COL20A1-201ENST00000358894 CTNND1O60716 968 aaKnown RBP13.23□□□□□ -0.29
COL20A1-201ENST00000358894 SHMT1P34896 483 aa13.23□□□□□ -0.29
COL20A1-201ENST00000358894 CUL1Q13616 776 aa13.23□□□□□ -0.29
COL20A1-201ENST00000358894 STRIP1Q5VSL9 837 aa13.23□□□□□ -0.29
COL20A1-201ENST00000358894 INTS8Q75QN2 995 aaKnown RBP13.23□□□□□ -0.29
COL20A1-201ENST00000358894 LDHDQ86WU2 507 aa13.23□□□□□ -0.29
COL20A1-201ENST00000358894 XXYLT1Q8NBI6 393 aa13.23□□□□□ -0.29
COL20A1-201ENST00000358894 CYP2W1Q8TAV3 490 aa13.23□□□□□ -0.29
COL20A1-201ENST00000358894 ZNF507Q8TCN5 953 aa13.23□□□□□ -0.29
COL20A1-201ENST00000358894 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.23□□□□□ -0.29
COL20A1-201ENST00000358894 TAF1DQ9H5J8 278 aaPredicted RBP13.23□□□□□ -0.29
COL20A1-201ENST00000358894 ZNF277Q9NRM2 450 aaPredicted RBP13.23□□□□□ -0.29
COL20A1-201ENST00000358894 C5P01031 1676 aa13.23□□□□□ -0.29
COL20A1-201ENST00000358894 PASKQ96RG2 1323 aa13.23□□□□□ -0.29
COL20A1-201ENST00000358894 NOP56O00567 594 aaKnown RBP13.23□□□□□ -0.29
COL20A1-201ENST00000358894 FTLP02792 175 aaPredicted RBP13.23□□□□□ -0.29
COL20A1-201ENST00000358894 GUCY1A3Q02108 690 aa13.23□□□□□ -0.29
COL20A1-201ENST00000358894 GNPTABQ3T906 1256 aa13.23□□□□□ -0.29
COL20A1-201ENST00000358894 MTERF2Q49AM1 385 aa13.23□□□□□ -0.29
COL20A1-201ENST00000358894 RUSC1Q9BVN2 902 aa13.23□□□□□ -0.29
COL20A1-201ENST00000358894 KDM4FA0A1W2PPD8 638 aa13.22□□□□□ -0.29
COL20A1-201ENST00000358894 MSH4O15457 936 aa13.22□□□□□ -0.29
COL20A1-201ENST00000358894 KRT15P19012 456 aa13.22□□□□□ -0.29
COL20A1-201ENST00000358894 ECE1P42892 770 aa13.22□□□□□ -0.29
COL20A1-201ENST00000358894 SGO2Q562F6 1265 aa13.22□□□□□ -0.29
COL20A1-201ENST00000358894 ZFPM1Q8IX07 1006 aa13.22□□□□□ -0.29
COL20A1-201ENST00000358894 RAB21Q9UL25 225 aa13.22□□□□□ -0.29
COL20A1-201ENST00000358894 SCN11AQ9UI33 1791 aa13.22□□□□□ -0.29
COL20A1-201ENST00000358894 THAP12O43422 761 aa13.22□□□□□ -0.29
COL20A1-201ENST00000358894 RAD51CO43502 376 aa13.22□□□□□ -0.29
COL20A1-201ENST00000358894 SOX5P35711 763 aa13.22□□□□□ -0.29
COL20A1-201ENST00000358894 NAB2Q15742 525 aa13.22□□□□□ -0.29
COL20A1-201ENST00000358894 RPUSD2Q8IZ73 545 aaKnown RBP13.22□□□□□ -0.29
COL20A1-201ENST00000358894 OR2W6PQ8NHA6 318 aa13.22□□□□□ -0.29
COL20A1-201ENST00000358894 SHISA4Q96DD7 197 aa13.22□□□□□ -0.29
COL20A1-201ENST00000358894 RMDN3Q96TC7 470 aa13.22□□□□□ -0.29
COL20A1-201ENST00000358894 IQCGQ9H095 443 aaKnown RBP13.22□□□□□ -0.29
COL20A1-201ENST00000358894 FBXO28Q9NVF7 368 aa13.22□□□□□ -0.29
COL20A1-201ENST00000358894 CHORDC1Q9UHD1 332 aaPredicted RBP13.22□□□□□ -0.29
COL20A1-201ENST00000358894 REXO2Q9Y3B8 237 aaKnown RBP13.22□□□□□ -0.29
COL20A1-201ENST00000358894 TMOD1P28289 359 aa13.22□□□□□ -0.29
COL20A1-201ENST00000358894 ATP5DP30049 168 aa13.22□□□□□ -0.29
COL20A1-201ENST00000358894 PIK3CAP42336 1068 aa13.22□□□□□ -0.29
COL20A1-201ENST00000358894 KLHDC7AQ5VTJ3 777 aa13.22□□□□□ -0.29
COL20A1-201ENST00000358894 ANKRD35Q8N283 1001 aa13.22□□□□□ -0.29
COL20A1-201ENST00000358894 INTS9Q9NV88 658 aaKnown RBP13.22□□□□□ -0.29
COL20A1-201ENST00000358894 PDE2AO00408 941 aaPredicted RBP13.21□□□□□ -0.29
COL20A1-201ENST00000358894 VAMP7P51809 220 aa13.21□□□□□ -0.29
COL20A1-201ENST00000358894 LACTBP83111 547 aaPredicted RBP13.21□□□□□ -0.29
COL20A1-201ENST00000358894 MKRN4PQ13434 485 aaPredicted RBP13.21□□□□□ -0.29
COL20A1-201ENST00000358894 MMGT1Q8N4V1 131 aa13.21□□□□□ -0.29
COL20A1-201ENST00000358894 NEK9Q8TD19 979 aa13.21□□□□□ -0.29
COL20A1-201ENST00000358894 ACER1Q8TDN7 264 aa13.21□□□□□ -0.29
COL20A1-201ENST00000358894 ATP6V0A1Q93050 837 aa13.21□□□□□ -0.29
COL20A1-201ENST00000358894 MMTAG2Q9BU76 263 aaKnown RBP13.21□□□□□ -0.29
COL20A1-201ENST00000358894 FBXL5Q9UKA1 691 aa13.21□□□□□ -0.29
COL20A1-201ENST00000358894 ZSCAN5CA6NGD5 496 aaPredicted RBP13.21□□□□□ -0.29
COL20A1-201ENST00000358894 HMGB1P1B2RPK0 211 aaPredicted RBP13.21□□□□□ -0.29
COL20A1-201ENST00000358894 MEA1Q16626 185 aa13.21□□□□□ -0.29
COL20A1-201ENST00000358894 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.21□□□□□ -0.29
COL20A1-201ENST00000358894 ZIM3Q96PE6 472 aa13.21□□□□□ -0.29
COL20A1-201ENST00000358894 PAGR1Q9BTK6 254 aa13.21□□□□□ -0.29
COL20A1-201ENST00000358894 VPS37BQ9H9H4 285 aa13.21□□□□□ -0.29
COL20A1-201ENST00000358894 KCNQ5Q9NR82 932 aa13.21□□□□□ -0.29
COL20A1-201ENST00000358894 LCMT1Q9UIC8 334 aa13.21□□□□□ -0.29
COL20A1-201ENST00000358894 PITPNM2Q9BZ72 1349 aa13.21□□□□□ -0.29
COL20A1-201ENST00000358894 GRID2IPA4D2P6 1211 aa13.21□□□□□ -0.3
COL20A1-201ENST00000358894 TTI1O43156 1089 aa13.21□□□□□ -0.3
COL20A1-201ENST00000358894 FMO5P49326 533 aa13.21□□□□□ -0.3
COL20A1-201ENST00000358894 ZBTB16Q05516 673 aa13.21□□□□□ -0.3
COL20A1-201ENST00000358894 RHOT2Q8IXI1 618 aa13.21□□□□□ -0.3
COL20A1-201ENST00000358894 SYT2Q8N9I0 419 aaPredicted RBP13.21□□□□□ -0.3
COL20A1-201ENST00000358894 RFFLQ8WZ73 363 aa13.21□□□□□ -0.3
COL20A1-201ENST00000358894 MTMR9Q96QG7 549 aa13.21□□□□□ -0.3
COL20A1-201ENST00000358894 MPHOSPH6Q99547 160 aaKnown RBP13.21□□□□□ -0.3
COL20A1-201ENST00000358894 DNAJC5Q9H3Z4 198 aa13.21□□□□□ -0.3
COL20A1-201ENST00000358894 AZI2Q9H6S1 392 aa13.21□□□□□ -0.3
COL20A1-201ENST00000358894 TBX3O15119 743 aa13.21□□□□□ -0.3
COL20A1-201ENST00000358894 AKAP3O75969 853 aa13.21□□□□□ -0.3
COL20A1-201ENST00000358894 SNCBQ16143 134 aa13.21□□□□□ -0.3
COL20A1-201ENST00000358894 MIIPQ5JXC2 388 aa13.21□□□□□ -0.3
COL20A1-201ENST00000358894 HOMER3Q9NSC5 361 aa13.21□□□□□ -0.3
COL20A1-201ENST00000358894 NAGPAQ9UK23 515 aa13.21□□□□□ -0.3
COL20A1-201ENST00000358894 PCDHB4Q9Y5E5 795 aa13.21□□□□□ -0.3
COL20A1-201ENST00000358894 CD2APQ9Y5K6 639 aa13.21□□□□□ -0.3
COL20A1-201ENST00000358894 CHUKO15111 745 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms