RNA–Protein interactions for RNA: ENST00000358389.7

CNOT3-202, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-202ENST00000358389 CYP27B1O15528 508 aa12.32□□□□□ -0.44
CNOT3-202ENST00000358389 NONOQ15233 471 aaKnown RBP eCLIP12.32□□□□□ -0.44
CNOT3-202ENST00000358389 FAM26FQ5R3K3 315 aa12.32□□□□□ -0.44
CNOT3-202ENST00000358389 GUF1Q8N442 669 aaKnown RBP12.32□□□□□ -0.44
CNOT3-202ENST00000358389 MCUR1Q96AQ8 359 aa12.32□□□□□ -0.44
CNOT3-202ENST00000358389 C18orf8Q96DM3 657 aa12.32□□□□□ -0.44
CNOT3-202ENST00000358389 DDX50Q9BQ39 737 aaKnown RBP12.32□□□□□ -0.44
CNOT3-202ENST00000358389 MAGEF1Q9HAY2 307 aa12.32□□□□□ -0.44
CNOT3-202ENST00000358389 OSGEPQ9NPF4 335 aa12.32□□□□□ -0.44
CNOT3-202ENST00000358389 RHBDL2Q9NX52 303 aa12.32□□□□□ -0.44
CNOT3-202ENST00000358389 CTTNBP2NLQ9P2B4 639 aa12.32□□□□□ -0.44
CNOT3-202ENST00000358389 NAGPAQ9UK23 515 aa12.32□□□□□ -0.44
CNOT3-202ENST00000358389 TMEM59LQ9UK28 342 aa12.32□□□□□ -0.44
CNOT3-202ENST00000358389 N4BP2Q86UW6 1770 aaPredicted RBP12.32□□□□□ -0.44
CNOT3-202ENST00000358389 ATP5DP30049 168 aa12.32□□□□□ -0.44
CNOT3-202ENST00000358389 DBN1Q16643 649 aa12.32□□□□□ -0.44
CNOT3-202ENST00000358389 SLC5A9Q2M3M2 681 aa12.32□□□□□ -0.44
CNOT3-202ENST00000358389 TBC1D25Q3MII6 688 aa12.32□□□□□ -0.44
CNOT3-202ENST00000358389 ZBTB38Q8NAP3 1195 aaPredicted RBP12.32□□□□□ -0.44
CNOT3-202ENST00000358389 CCDC160A6NGH7 325 aa12.31□□□□□ -0.44
CNOT3-202ENST00000358389 GH1P01241 217 aa12.31□□□□□ -0.44
CNOT3-202ENST00000358389 GNAQP50148 359 aa12.31□□□□□ -0.44
CNOT3-202ENST00000358389 CACNA2D1P54289 1103 aa12.31□□□□□ -0.44
CNOT3-202ENST00000358389 ZBTB16Q05516 673 aa12.31□□□□□ -0.44
CNOT3-202ENST00000358389 KCNH2Q12809 1159 aa12.31□□□□□ -0.44
CNOT3-202ENST00000358389 SCYL3Q8IZE3 742 aa12.31□□□□□ -0.44
CNOT3-202ENST00000358389 VPS52Q8N1B4 723 aa12.31□□□□□ -0.44
CNOT3-202ENST00000358389 C4orf32Q8N8J7 132 aa12.31□□□□□ -0.44
CNOT3-202ENST00000358389 SUPT20HQ8NEM7 779 aa12.31□□□□□ -0.44
CNOT3-202ENST00000358389 RBM41Q96IZ5 413 aaKnown RBP12.31□□□□□ -0.44
CNOT3-202ENST00000358389 NT5C3AQ9H0P0 336 aa12.31□□□□□ -0.44
CNOT3-202ENST00000358389 CYP39A1Q9NYL5 469 aa12.31□□□□□ -0.44
CNOT3-202ENST00000358389 POTEMA6NI47 508 aa12.31□□□□□ -0.44
CNOT3-202ENST00000358389 ATP9AO75110 1047 aa12.31□□□□□ -0.44
CNOT3-202ENST00000358389 CTSWP56202 376 aa12.31□□□□□ -0.44
CNOT3-202ENST00000358389 TRIP13Q15645 432 aaPredicted RBP12.31□□□□□ -0.44
CNOT3-202ENST00000358389 EXOC3L4Q17RC7 722 aa12.31□□□□□ -0.44
CNOT3-202ENST00000358389 UBAP2Q5T6F2 1119 aaKnown RBP12.31□□□□□ -0.44
CNOT3-202ENST00000358389 EXOC3L1Q86VI1 746 aa12.31□□□□□ -0.44
CNOT3-202ENST00000358389 VCX3BQ9H321 246 aa12.31□□□□□ -0.44
CNOT3-202ENST00000358389 VCX3AQ9NNX9 186 aa12.31□□□□□ -0.44
CNOT3-202ENST00000358389 CTNNAL1Q9UBT7 734 aa12.31□□□□□ -0.44
CNOT3-202ENST00000358389 PCDH11XQ9BZA7 1347 aa12.31□□□□□ -0.44
CNOT3-202ENST00000358389 PCDH11YQ9BZA8 1340 aa12.31□□□□□ -0.44
CNOT3-202ENST00000358389 MYH7BA7E2Y1 1941 aa12.31□□□□□ -0.44
CNOT3-202ENST00000358389 ADAMTS13Q76LX8 1427 aa12.31□□□□□ -0.44
CNOT3-202ENST00000358389 TBCAO75347 108 aaKnown RBP12.31□□□□□ -0.44
CNOT3-202ENST00000358389 UNC5CO95185 931 aa12.31□□□□□ -0.44
CNOT3-202ENST00000358389 CBX6O95503 412 aa12.31□□□□□ -0.44
CNOT3-202ENST00000358389 ALADP13716 330 aa12.31□□□□□ -0.44
CNOT3-202ENST00000358389 KCNJ1P48048 391 aa12.31□□□□□ -0.44
CNOT3-202ENST00000358389 PLS1Q14651 629 aa12.31□□□□□ -0.44
CNOT3-202ENST00000358389 ZNF365Q70YC5 407 aa12.31□□□□□ -0.44
CNOT3-202ENST00000358389 MYLK2Q9H1R3 596 aa12.31□□□□□ -0.44
CNOT3-202ENST00000358389 WDR35Q9P2L0 1181 aa12.31□□□□□ -0.44
CNOT3-202ENST00000358389 PCDHA6Q9UN73 950 aa12.31□□□□□ -0.44
CNOT3-202ENST00000358389 PCDHA8Q9Y5H6 950 aa12.31□□□□□ -0.44
CNOT3-202ENST00000358389 AUHQ13825 339 aaKnown RBP12.3□□□□□ -0.44
CNOT3-202ENST00000358389 AADACL2Q6P093 401 aa12.3□□□□□ -0.44
CNOT3-202ENST00000358389 CCNJLQ8IV13 435 aa12.3□□□□□ -0.44
CNOT3-202ENST00000358389 AK8Q96MA6 479 aa12.3□□□□□ -0.44
CNOT3-202ENST00000358389 ADAM33Q9BZ11 813 aa12.3□□□□□ -0.44
CNOT3-202ENST00000358389 ADAM7Q9H2U9 754 aa12.3□□□□□ -0.44
CNOT3-202ENST00000358389 PICK1Q9NRD5 415 aa12.3□□□□□ -0.44
CNOT3-202ENST00000358389 RICTORQ6R327 1708 aa12.3□□□□□ -0.44
CNOT3-202ENST00000358389 THAP12O43422 761 aa12.3□□□□□ -0.44
CNOT3-202ENST00000358389 DEUP1Q05D60 604 aa12.3□□□□□ -0.44
CNOT3-202ENST00000358389 DNAJC3Q13217 504 aa12.3□□□□□ -0.44
CNOT3-202ENST00000358389 CALCRLQ16602 461 aa12.3□□□□□ -0.44
CNOT3-202ENST00000358389 TPTE2Q6XPS3 522 aa12.3□□□□□ -0.44
CNOT3-202ENST00000358389 AGGF1Q8N302 714 aaeCLIP12.3□□□□□ -0.44
CNOT3-202ENST00000358389 C6orf50Q9HD87 102 aa12.3□□□□□ -0.44
CNOT3-202ENST00000358389 RIC8AQ9NPQ8 531 aa12.3□□□□□ -0.44
CNOT3-202ENST00000358389 MAPK13O15264 365 aa12.3□□□□□ -0.44
CNOT3-202ENST00000358389 SPAG7O75391 227 aa12.3□□□□□ -0.44
CNOT3-202ENST00000358389 NOL4O94818 638 aa12.3□□□□□ -0.44
CNOT3-202ENST00000358389 NPTXRO95502 500 aa12.3□□□□□ -0.44
CNOT3-202ENST00000358389 GALCP54803 685 aa12.3□□□□□ -0.44
CNOT3-202ENST00000358389 RCN1Q15293 331 aa12.3□□□□□ -0.44
CNOT3-202ENST00000358389 FAM98CQ17RN3 349 aaKnown RBP12.3□□□□□ -0.44
CNOT3-202ENST00000358389 WDR78Q5VTH9 848 aa12.3□□□□□ -0.44
CNOT3-202ENST00000358389 CAPN12Q6ZSI9 719 aa12.3□□□□□ -0.44
CNOT3-202ENST00000358389 ARHGEF18Q6ZSZ5 1173 aa12.3□□□□□ -0.44
CNOT3-202ENST00000358389 HS2ST1Q7LGA3 356 aa12.3□□□□□ -0.44
CNOT3-202ENST00000358389 PNMA1Q8ND90 353 aa12.3□□□□□ -0.44
CNOT3-202ENST00000358389 FAM13CQ8NE31 585 aa12.3□□□□□ -0.44
CNOT3-202ENST00000358389 ABTB1Q969K4 478 aaPredicted RBP12.3□□□□□ -0.44
CNOT3-202ENST00000358389 LMCD1Q9NZU5 365 aa12.3□□□□□ -0.44
CNOT3-202ENST00000358389 SMCO2A6NFE2 343 aa12.3□□□□□ -0.44
CNOT3-202ENST00000358389 PDE8AO60658 829 aa12.3□□□□□ -0.44
CNOT3-202ENST00000358389 BAG2O95816 211 aa12.3□□□□□ -0.44
CNOT3-202ENST00000358389 LDHBP07195 334 aaKnown RBP12.3□□□□□ -0.44
CNOT3-202ENST00000358389 TPBGLP0DKB5 382 aa12.3□□□□□ -0.44
CNOT3-202ENST00000358389 NR2F2P24468 414 aa12.3□□□□□ -0.44
CNOT3-202ENST00000358389 SEL1L2Q5TEA6 688 aa12.3□□□□□ -0.44
CNOT3-202ENST00000358389 GLYCTKQ8IVS8 523 aa12.3□□□□□ -0.44
CNOT3-202ENST00000358389 CNKSR2Q8WXI2 1034 aa12.3□□□□□ -0.44
CNOT3-202ENST00000358389 CDCA7Q9BWT1 371 aaPredicted RBP12.3□□□□□ -0.44
CNOT3-202ENST00000358389 GPCPD1Q9NPB8 672 aa12.3□□□□□ -0.44
CNOT3-202ENST00000358389 PARP2Q9UGN5 583 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms