RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 TRAF3IP3Q9Y228 551 aa13.12□□□□□ -0.31
SMARCAL1-201ENST00000357276 SNED1Q8TER0 1413 aa13.11□□□□□ -0.31
SMARCAL1-201ENST00000357276 LOC102724428A0A0B4J2F2 783 aa13.11□□□□□ -0.31
SMARCAL1-201ENST00000357276 hCG_1984214I3L0E3 225 aa13.11□□□□□ -0.31
SMARCAL1-201ENST00000357276 SKIV2L2P42285 1042 aaKnown RBP13.11□□□□□ -0.31
SMARCAL1-201ENST00000357276 SIK1P57059 783 aa13.11□□□□□ -0.31
SMARCAL1-201ENST00000357276 SPICE1Q8N0Z3 855 aa13.11□□□□□ -0.31
SMARCAL1-201ENST00000357276 ZNF713Q8N859 430 aaPredicted RBP13.11□□□□□ -0.31
SMARCAL1-201ENST00000357276 PRCCQ92733 491 aaPredicted RBP13.11□□□□□ -0.31
SMARCAL1-201ENST00000357276 HAS1Q92839 578 aa13.11□□□□□ -0.31
SMARCAL1-201ENST00000357276 SH3GL3Q99963 347 aa13.11□□□□□ -0.31
SMARCAL1-201ENST00000357276 SPATS2LQ9NUQ6 558 aaKnown RBP13.11□□□□□ -0.31
SMARCAL1-201ENST00000357276 MINPP1Q9UNW1 487 aa13.11□□□□□ -0.31
SMARCAL1-201ENST00000357276 BRWD3Q6RI45 1802 aa13.11□□□□□ -0.31
SMARCAL1-201ENST00000357276 ALAS1P13196 640 aa13.11□□□□□ -0.31
SMARCAL1-201ENST00000357276 VCAM1P19320 739 aa13.11□□□□□ -0.31
SMARCAL1-201ENST00000357276 PRDX5P30044 214 aa13.11□□□□□ -0.31
SMARCAL1-201ENST00000357276 GBP1P32455 592 aa13.11□□□□□ -0.31
SMARCAL1-201ENST00000357276 MSH2P43246 934 aa13.11□□□□□ -0.31
SMARCAL1-201ENST00000357276 NOVP48745 357 aa13.11□□□□□ -0.31
SMARCAL1-201ENST00000357276 GALCP54803 685 aa13.11□□□□□ -0.31
SMARCAL1-201ENST00000357276 CLUL1Q15846 466 aa13.11□□□□□ -0.31
SMARCAL1-201ENST00000357276 CMPK2Q5EBM0 449 aa13.11□□□□□ -0.31
SMARCAL1-201ENST00000357276 ANKRD20A2Q5SQ80 823 aa13.11□□□□□ -0.31
SMARCAL1-201ENST00000357276 ANKRD20A1Q5TYW2 823 aa13.11□□□□□ -0.31
SMARCAL1-201ENST00000357276 ANKRD20A3Q5VUR7 823 aa13.11□□□□□ -0.31
SMARCAL1-201ENST00000357276 LNX1Q8TBB1 728 aaPredicted RBP13.11□□□□□ -0.31
SMARCAL1-201ENST00000357276 NAP1L3Q99457 506 aaPredicted RBP13.11□□□□□ -0.31
SMARCAL1-201ENST00000357276 TRIM31Q9BZY9 425 aa13.11□□□□□ -0.31
SMARCAL1-201ENST00000357276 SEMA4AQ9H3S1 761 aa13.11□□□□□ -0.31
SMARCAL1-201ENST00000357276 EMILIN3Q9NT22 766 aa13.11□□□□□ -0.31
SMARCAL1-201ENST00000357276 A8MUI8 341 aa13.1□□□□□ -0.31
SMARCAL1-201ENST00000357276 AFPP02771 609 aaKnown RBP13.1□□□□□ -0.31
SMARCAL1-201ENST00000357276 VIMP08670 466 aaKnown RBP13.1□□□□□ -0.31
SMARCAL1-201ENST00000357276 LINGO3P0C6S8 592 aa13.1□□□□□ -0.31
SMARCAL1-201ENST00000357276 LMNB2Q03252 620 aa13.1□□□□□ -0.31
SMARCAL1-201ENST00000357276 INTS5Q6P9B9 1019 aaKnown RBP13.1□□□□□ -0.31
SMARCAL1-201ENST00000357276 GLG1Q92896 1179 aa13.1□□□□□ -0.31
SMARCAL1-201ENST00000357276 RIOX1Q9H6W3 641 aa13.1□□□□□ -0.31
SMARCAL1-201ENST00000357276 CCDC87Q9NVE4 849 aa13.1□□□□□ -0.31
SMARCAL1-201ENST00000357276 PCYOX1Q9UHG3 505 aa13.1□□□□□ -0.31
SMARCAL1-201ENST00000357276 CETN3O15182 167 aa13.1□□□□□ -0.31
SMARCAL1-201ENST00000357276 RIPK2O43353 540 aa13.1□□□□□ -0.31
SMARCAL1-201ENST00000357276 TMEM253P0C7T8 217 aa13.1□□□□□ -0.31
SMARCAL1-201ENST00000357276 TSPY3P0CV98 308 aa13.1□□□□□ -0.31
SMARCAL1-201ENST00000357276 TSPY8P0CW00 308 aa13.1□□□□□ -0.31
SMARCAL1-201ENST00000357276 RASA1P20936 1047 aa13.1□□□□□ -0.31
SMARCAL1-201ENST00000357276 EXOC3L4Q17RC7 722 aa13.1□□□□□ -0.31
SMARCAL1-201ENST00000357276 EXOC3L1Q86VI1 746 aa13.1□□□□□ -0.31
SMARCAL1-201ENST00000357276 NELFCDQ8IXH7 590 aa13.1□□□□□ -0.31
SMARCAL1-201ENST00000357276 EPS8L3Q8TE67 593 aaKnown RBP13.1□□□□□ -0.31
SMARCAL1-201ENST00000357276 RFFLQ8WZ73 363 aa13.1□□□□□ -0.31
SMARCAL1-201ENST00000357276 STMN4Q9H169 189 aaPredicted RBP13.1□□□□□ -0.31
SMARCAL1-201ENST00000357276 RXFP1Q9HBX9 757 aa13.1□□□□□ -0.31
SMARCAL1-201ENST00000357276 OSGEPQ9NPF4 335 aa13.1□□□□□ -0.31
SMARCAL1-201ENST00000357276 KCNG1Q9UIX4 513 aa13.1□□□□□ -0.31
SMARCAL1-201ENST00000357276 CNTNAP4Q9C0A0 1308 aa13.1□□□□□ -0.31
SMARCAL1-201ENST00000357276 GOLGA6L10A0A0M3HER8 536 aa13.1□□□□□ -0.31
SMARCAL1-201ENST00000357276 GNAZP19086 355 aa13.1□□□□□ -0.31
SMARCAL1-201ENST00000357276 DIXDC1Q155Q3 683 aa13.1□□□□□ -0.31
SMARCAL1-201ENST00000357276 SOGA3Q5TF21 947 aa13.1□□□□□ -0.31
SMARCAL1-201ENST00000357276 CCDC65Q8IXS2 484 aa13.1□□□□□ -0.31
SMARCAL1-201ENST00000357276 FITM2Q8N6M3 262 aa13.1□□□□□ -0.31
SMARCAL1-201ENST00000357276 ANKLE1Q8NAG6 615 aa13.1□□□□□ -0.31
SMARCAL1-201ENST00000357276 ROPN1BQ9BZX4 212 aaPredicted RBP13.1□□□□□ -0.31
SMARCAL1-201ENST00000357276 ROPN1Q9HAT0 212 aaPredicted RBP13.1□□□□□ -0.31
SMARCAL1-201ENST00000357276 C10orf71Q711Q0 1435 aa13.09□□□□□ -0.31
SMARCAL1-201ENST00000357276 GTPBP10A4D1E9 387 aaKnown RBP13.09□□□□□ -0.31
SMARCAL1-201ENST00000357276 SLC26A4O43511 780 aa13.09□□□□□ -0.31
SMARCAL1-201ENST00000357276 LUC7L3O95232 432 aaKnown RBP13.09□□□□□ -0.31
SMARCAL1-201ENST00000357276 ATP2A2P16615 1042 aaKnown RBP13.09□□□□□ -0.31
SMARCAL1-201ENST00000357276 KLRK1P26718 216 aa13.09□□□□□ -0.31
SMARCAL1-201ENST00000357276 HOXD13P35453 343 aa13.09□□□□□ -0.31
SMARCAL1-201ENST00000357276 PLTPP55058 493 aa13.09□□□□□ -0.31
SMARCAL1-201ENST00000357276 CCDC15Q0P6D6 951 aa13.09□□□□□ -0.31
SMARCAL1-201ENST00000357276 SF3B3Q15393 1217 aaKnown RBP13.09□□□□□ -0.31
SMARCAL1-201ENST00000357276 EPM2AIP1Q7L775 607 aaPredicted RBP13.09□□□□□ -0.31
SMARCAL1-201ENST00000357276 SLC35G2Q8TBE7 412 aa13.09□□□□□ -0.31
SMARCAL1-201ENST00000357276 PIGSQ96S52 555 aa13.09□□□□□ -0.31
SMARCAL1-201ENST00000357276 PLCD4Q9BRC7 762 aa13.09□□□□□ -0.31
SMARCAL1-201ENST00000357276 LRRC42Q9Y546 428 aa13.09□□□□□ -0.31
SMARCAL1-201ENST00000357276 PITPNM2Q9BZ72 1349 aa13.09□□□□□ -0.31
SMARCAL1-201ENST00000357276 IGSF9BQ9UPX0 1349 aa13.09□□□□□ -0.31
SMARCAL1-201ENST00000357276 SUN1O94901 812 aa13.09□□□□□ -0.31
SMARCAL1-201ENST00000357276 FESP07332 822 aa13.09□□□□□ -0.31
SMARCAL1-201ENST00000357276 RARGP13631 454 aa13.09□□□□□ -0.31
SMARCAL1-201ENST00000357276 NR2F2P24468 414 aa13.09□□□□□ -0.31
SMARCAL1-201ENST00000357276 CTNNA2P26232 953 aa13.09□□□□□ -0.31
SMARCAL1-201ENST00000357276 EPS15P42566 896 aa13.09□□□□□ -0.31
SMARCAL1-201ENST00000357276 RPL21P46778 160 aaKnown RBP13.09□□□□□ -0.31
SMARCAL1-201ENST00000357276 TAOK1Q7L7X3 1001 aa13.09□□□□□ -0.31
SMARCAL1-201ENST00000357276 VPS36Q86VN1 386 aa13.09□□□□□ -0.31
SMARCAL1-201ENST00000357276 KLHL29Q96CT2 875 aa13.09□□□□□ -0.31
SMARCAL1-201ENST00000357276 SNX24Q9Y343 169 aa13.09□□□□□ -0.31
SMARCAL1-201ENST00000357276 PHF2O75151 1096 aa13.08□□□□□ -0.31
SMARCAL1-201ENST00000357276 CYP11B2P19099 503 aa13.08□□□□□ -0.31
SMARCAL1-201ENST00000357276 HADHBP55084 474 aaKnown RBP13.08□□□□□ -0.31
SMARCAL1-201ENST00000357276 SARNPP82979 210 aaKnown RBP13.08□□□□□ -0.31
SMARCAL1-201ENST00000357276 RC3H1Q5TC82 1133 aaKnown RBP13.08□□□□□ -0.31
SMARCAL1-201ENST00000357276 VSTM1Q6UX27 236 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms