RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 TMPRSS15P98073 1019 aa16.72■□□□□ 0.27
TRAPPC11-202ENST00000357207 PDIA5Q14554 519 aa16.72■□□□□ 0.27
TRAPPC11-202ENST00000357207 RAPH1Q70E73 1250 aa16.72■□□□□ 0.27
TRAPPC11-202ENST00000357207 LRGUKQ96M69 825 aa16.72■□□□□ 0.27
TRAPPC11-202ENST00000357207 TTC25Q96NG3 672 aa16.72■□□□□ 0.27
TRAPPC11-202ENST00000357207 C7orf25Q9BPX7 421 aa16.72■□□□□ 0.27
TRAPPC11-202ENST00000357207 ECT2Q9H8V3 914 aa16.72■□□□□ 0.27
TRAPPC11-202ENST00000357207 SMYD2Q9NRG4 433 aa16.72■□□□□ 0.27
TRAPPC11-202ENST00000357207 SMARCAL1Q9NZC9 954 aa16.72■□□□□ 0.27
TRAPPC11-202ENST00000357207 PFASO15067 1338 aa16.72■□□□□ 0.27
TRAPPC11-202ENST00000357207 RFX5P48382 616 aaPredicted RBP16.71■□□□□ 0.27
TRAPPC11-202ENST00000357207 KCNQ4P56696 695 aa16.71■□□□□ 0.27
TRAPPC11-202ENST00000357207 ESRRGP62508 458 aa16.71■□□□□ 0.27
TRAPPC11-202ENST00000357207 WDR93Q6P2C0 686 aa16.71■□□□□ 0.27
TRAPPC11-202ENST00000357207 LRIG3Q6UXM1 1119 aa16.71■□□□□ 0.27
TRAPPC11-202ENST00000357207 WDR75Q8IWA0 830 aaKnown RBP16.71■□□□□ 0.27
TRAPPC11-202ENST00000357207 GRAMD1AQ96CP6 724 aa16.71■□□□□ 0.27
TRAPPC11-202ENST00000357207 PPP1R3GB7ZBB8 358 aa16.71■□□□□ 0.27
TRAPPC11-202ENST00000357207 ABCD1P33897 745 aa16.71■□□□□ 0.27
TRAPPC11-202ENST00000357207 SEC24CP53992 1094 aa16.71■□□□□ 0.27
TRAPPC11-202ENST00000357207 GRAPQ13588 217 aa16.71■□□□□ 0.27
TRAPPC11-202ENST00000357207 PPP1R18Q6NYC8 613 aa16.71■□□□□ 0.27
TRAPPC11-202ENST00000357207 FRMD5Q7Z6J6 570 aa16.71■□□□□ 0.27
TRAPPC11-202ENST00000357207 CRLF3Q8IUI8 442 aa16.71■□□□□ 0.27
TRAPPC11-202ENST00000357207 CCDC117Q8IWD4 279 aaPredicted RBP16.71■□□□□ 0.27
TRAPPC11-202ENST00000357207 ST13P4Q8IZP2 240 aaPredicted RBP16.71■□□□□ 0.27
TRAPPC11-202ENST00000357207 GRAPLQ8TC17 118 aaPredicted RBP16.71■□□□□ 0.27
TRAPPC11-202ENST00000357207 FAM149B1Q96BN6 582 aa16.71■□□□□ 0.27
TRAPPC11-202ENST00000357207 ZNF277Q9NRM2 450 aaPredicted RBP16.71■□□□□ 0.27
TRAPPC11-202ENST00000357207 COPEO14579 308 aa16.71■□□□□ 0.27
TRAPPC11-202ENST00000357207 TTI1O43156 1089 aa16.71■□□□□ 0.27
TRAPPC11-202ENST00000357207 HAUS5O94927 633 aa16.71■□□□□ 0.27
TRAPPC11-202ENST00000357207 ZWINTO95229 277 aa16.71■□□□□ 0.27
TRAPPC11-202ENST00000357207 FOXP4Q8IVH2 680 aaPredicted RBP16.71■□□□□ 0.27
TRAPPC11-202ENST00000357207 MORC4Q8TE76 937 aa16.71■□□□□ 0.27
TRAPPC11-202ENST00000357207 SPDL1Q96EA4 605 aa16.71■□□□□ 0.27
TRAPPC11-202ENST00000357207 ANKRD36BP1Q96IX9 119 aa16.71■□□□□ 0.27
TRAPPC11-202ENST00000357207 WNT8AQ9H1J5 351 aa16.71■□□□□ 0.27
TRAPPC11-202ENST00000357207 INO80B-WBP1J3KQ70 363 aa16.71■□□□□ 0.26
TRAPPC11-202ENST00000357207 TRPA1O75762 1119 aa16.71■□□□□ 0.26
TRAPPC11-202ENST00000357207 SERPINB2P05120 415 aa16.71■□□□□ 0.26
TRAPPC11-202ENST00000357207 PDHA1P08559 390 aa16.71■□□□□ 0.26
TRAPPC11-202ENST00000357207 ANKRD20A4Q4UJ75 823 aa16.71■□□□□ 0.26
TRAPPC11-202ENST00000357207 ANKRD20A8PQ5CZ79 823 aa16.71■□□□□ 0.26
TRAPPC11-202ENST00000357207 ANKRD20A2Q5SQ80 823 aa16.71■□□□□ 0.26
TRAPPC11-202ENST00000357207 ANKRD20A1Q5TYW2 823 aa16.71■□□□□ 0.26
TRAPPC11-202ENST00000357207 EFHD1Q9BUP0 239 aa16.71■□□□□ 0.26
TRAPPC11-202ENST00000357207 INO80BQ9C086 356 aaPredicted RBP16.71■□□□□ 0.26
TRAPPC11-202ENST00000357207 SEL1LQ9UBV2 794 aa16.71■□□□□ 0.26
TRAPPC11-202ENST00000357207 DCTN4Q9UJW0 460 aa16.71■□□□□ 0.26
TRAPPC11-202ENST00000357207 NCF2P19878 526 aaPredicted RBP16.7■□□□□ 0.26
TRAPPC11-202ENST00000357207 LRRC23Q53EV4 343 aaPredicted RBP16.7■□□□□ 0.26
TRAPPC11-202ENST00000357207 KIAA1755Q5JYT7 1200 aa16.7■□□□□ 0.26
TRAPPC11-202ENST00000357207 ERICH1Q86X53 443 aa16.7■□□□□ 0.26
TRAPPC11-202ENST00000357207 CCNYQ8ND76 341 aa16.7■□□□□ 0.26
TRAPPC11-202ENST00000357207 NEDD1Q8NHV4 660 aa16.7■□□□□ 0.26
TRAPPC11-202ENST00000357207 NUP85Q9BW27 656 aa16.7■□□□□ 0.26
TRAPPC11-202ENST00000357207 TTC7AQ9ULT0 858 aaPredicted RBP16.7■□□□□ 0.26
TRAPPC11-202ENST00000357207 HPSEQ9Y251 543 aa16.7■□□□□ 0.26
TRAPPC11-202ENST00000357207 MED7O43513 233 aa16.7■□□□□ 0.26
TRAPPC11-202ENST00000357207 AGTP01019 485 aa16.7■□□□□ 0.26
TRAPPC11-202ENST00000357207 CAPRIN2Q6IMN6 1127 aaKnown RBP16.7■□□□□ 0.26
TRAPPC11-202ENST00000357207 E9PCH4 1651 aa16.7■□□□□ 0.26
TRAPPC11-202ENST00000357207 SYNJ2BP-COX16A0A087WUM0 186 aa16.7■□□□□ 0.26
TRAPPC11-202ENST00000357207 USP17L10C9JJH3 530 aa16.7■□□□□ 0.26
TRAPPC11-202ENST00000357207 SPECC1L-ADORA2AF8WAN1 911 aa16.7■□□□□ 0.26
TRAPPC11-202ENST00000357207 SOX5P35711 763 aa16.7■□□□□ 0.26
TRAPPC11-202ENST00000357207 SNAP25P60880 206 aa16.7■□□□□ 0.26
TRAPPC11-202ENST00000357207 DNAAF3Q8N9W5 541 aa16.7■□□□□ 0.26
TRAPPC11-202ENST00000357207 CELF1Q92879 486 aaKnown RBP16.7■□□□□ 0.26
TRAPPC11-202ENST00000357207 INTS2Q9H0H0 1204 aaKnown RBP16.7■□□□□ 0.26
TRAPPC11-202ENST00000357207 HAUS2Q9NVX0 235 aa16.7■□□□□ 0.26
TRAPPC11-202ENST00000357207 COX16Q9P0S2 106 aa16.7■□□□□ 0.26
TRAPPC11-202ENST00000357207 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.7■□□□□ 0.26
TRAPPC11-202ENST00000357207 AK9Q5TCS8 1911 aa16.7■□□□□ 0.26
TRAPPC11-202ENST00000357207 ARAP3Q8WWN8 1544 aa16.7■□□□□ 0.26
TRAPPC11-202ENST00000357207 UTYO14607 1347 aa16.7■□□□□ 0.26
TRAPPC11-202ENST00000357207 CLRN2A0PK11 232 aa16.69■□□□□ 0.26
TRAPPC11-202ENST00000357207 PHF20L1A8MW92 1017 aa16.69■□□□□ 0.26
TRAPPC11-202ENST00000357207 PPEF1O14829 653 aaPredicted RBP16.69■□□□□ 0.26
TRAPPC11-202ENST00000357207 SPAG7O75391 227 aa16.69■□□□□ 0.26
TRAPPC11-202ENST00000357207 GGPS1O95749 300 aa16.69■□□□□ 0.26
TRAPPC11-202ENST00000357207 TTC4O95801 387 aa16.69■□□□□ 0.26
TRAPPC11-202ENST00000357207 MKRN3Q13064 507 aaKnown RBP16.69■□□□□ 0.26
TRAPPC11-202ENST00000357207 FAM160B1Q5W0V3 765 aa16.69■□□□□ 0.26
TRAPPC11-202ENST00000357207 K7ERI5 159 aa16.69■□□□□ 0.26
TRAPPC11-202ENST00000357207 PRPSAP2O60256 369 aa16.69■□□□□ 0.26
TRAPPC11-202ENST00000357207 ZBED1O96006 694 aa16.69■□□□□ 0.26
TRAPPC11-202ENST00000357207 TRIM49P0CI25 452 aa16.69■□□□□ 0.26
TRAPPC11-202ENST00000357207 TRIM49CP0CI26 452 aa16.69■□□□□ 0.26
TRAPPC11-202ENST00000357207 GABPAQ06546 454 aa16.69■□□□□ 0.26
TRAPPC11-202ENST00000357207 RNF25Q96BH1 459 aaPredicted RBP16.69■□□□□ 0.26
TRAPPC11-202ENST00000357207 CDHR1Q96JP9 859 aa16.69■□□□□ 0.26
TRAPPC11-202ENST00000357207 CENPKQ9BS16 269 aa16.69■□□□□ 0.26
TRAPPC11-202ENST00000357207 PLA2G12BQ9BX93 195 aa16.69■□□□□ 0.26
TRAPPC11-202ENST00000357207 TLK1Q9UKI8 766 aa16.69■□□□□ 0.26
TRAPPC11-202ENST00000357207 CDC42BPGQ6DT37 1551 aa16.69■□□□□ 0.26
TRAPPC11-202ENST00000357207 PDXKO00764 312 aa16.69■□□□□ 0.26
TRAPPC11-202ENST00000357207 FAM107AO95990 144 aa16.69■□□□□ 0.26
TRAPPC11-202ENST00000357207 CDR2Q01850 454 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms