RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 MFSD5Q6N075 450 aa7.04□□□□□ -1.28
TRIM38-201ENST00000357085 ZSCAN29Q8IWY8 852 aaPredicted RBP7.04□□□□□ -1.28
TRIM38-201ENST00000357085 CNPY3Q9BT09 278 aa7.04□□□□□ -1.28
TRIM38-201ENST00000357085 PITPNM3Q9BZ71 974 aa7.04□□□□□ -1.28
TRIM38-201ENST00000357085 KCNJ14Q9UNX9 436 aa7.04□□□□□ -1.28
TRIM38-201ENST00000357085 L3MBTL1Q9Y468 752 aa7.04□□□□□ -1.28
TRIM38-201ENST00000357085 TXNDC9O14530 226 aa7.04□□□□□ -1.28
TRIM38-201ENST00000357085 BACH1O14867 736 aa7.04□□□□□ -1.28
TRIM38-201ENST00000357085 CC2D2BQ6DHV5 1058 aa7.04□□□□□ -1.28
TRIM38-201ENST00000357085 RBBP8NLQ8NC74 664 aaPredicted RBP7.04□□□□□ -1.28
TRIM38-201ENST00000357085 DAGLBQ8NCG7 672 aa7.04□□□□□ -1.28
TRIM38-201ENST00000357085 AGAP11Q8TF27 550 aa7.04□□□□□ -1.28
TRIM38-201ENST00000357085 C17orf50Q8WW18 174 aa7.04□□□□□ -1.28
TRIM38-201ENST00000357085 POLD4Q9HCU8 107 aa7.04□□□□□ -1.28
TRIM38-201ENST00000357085 PALMO75781 387 aa7.04□□□□□ -1.28
TRIM38-201ENST00000357085 FGGP02679 453 aa7.04□□□□□ -1.28
TRIM38-201ENST00000357085 SNRPFP62306 86 aaKnown RBP7.04□□□□□ -1.28
TRIM38-201ENST00000357085 GRIN1Q05586 938 aa7.04□□□□□ -1.28
TRIM38-201ENST00000357085 SPATA5Q8NB90 893 aa7.04□□□□□ -1.28
TRIM38-201ENST00000357085 C7orf25Q9BPX7 421 aa7.04□□□□□ -1.28
TRIM38-201ENST00000357085 FBXO2Q9UK22 296 aaPredicted RBP7.04□□□□□ -1.28
TRIM38-201ENST00000357085 EXOC1LA0A1B0GW35 172 aa7.04□□□□□ -1.28
TRIM38-201ENST00000357085 ERVV-2B6SEH9 535 aa7.04□□□□□ -1.28
TRIM38-201ENST00000357085 IRF6O14896 467 aa7.04□□□□□ -1.28
TRIM38-201ENST00000357085 SARSP49591 514 aaKnown RBP7.04□□□□□ -1.28
TRIM38-201ENST00000357085 PTGDRQ13258 359 aa7.04□□□□□ -1.28
TRIM38-201ENST00000357085 CNBD1Q8NA66 436 aa7.04□□□□□ -1.28
TRIM38-201ENST00000357085 ZNF184Q99676 751 aaPredicted RBP7.04□□□□□ -1.28
TRIM38-201ENST00000357085 PARVBQ9HBI1 364 aa7.04□□□□□ -1.28
TRIM38-201ENST00000357085 TRIM10Q9UDY6 481 aa7.04□□□□□ -1.28
TRIM38-201ENST00000357085 MYH9P35579 1960 aaKnown RBP7.04□□□□□ -1.28
TRIM38-201ENST00000357085 RSPH10B2B2RC85 870 aa7.04□□□□□ -1.28
TRIM38-201ENST00000357085 FAM13AO94988 1023 aa7.04□□□□□ -1.28
TRIM38-201ENST00000357085 RSPH10BP0C881 870 aa7.04□□□□□ -1.28
TRIM38-201ENST00000357085 GJA8P48165 433 aa7.04□□□□□ -1.28
TRIM38-201ENST00000357085 EXOC3L4Q17RC7 722 aa7.04□□□□□ -1.28
TRIM38-201ENST00000357085 NEK8Q86SG6 692 aa7.04□□□□□ -1.28
TRIM38-201ENST00000357085 GDAP1Q8TB36 358 aa7.04□□□□□ -1.28
TRIM38-201ENST00000357085 ZWILCHQ9H900 591 aa7.04□□□□□ -1.28
TRIM38-201ENST00000357085 TTC7AQ9ULT0 858 aaPredicted RBP7.04□□□□□ -1.28
TRIM38-201ENST00000357085 KRT37O76014 449 aa7.04□□□□□ -1.28
TRIM38-201ENST00000357085 TSPY3P0CV98 308 aa7.04□□□□□ -1.28
TRIM38-201ENST00000357085 TSPY8P0CW00 308 aa7.04□□□□□ -1.28
TRIM38-201ENST00000357085 USP11P51784 963 aa7.04□□□□□ -1.28
TRIM38-201ENST00000357085 RASGRF1Q13972 1273 aa7.04□□□□□ -1.28
TRIM38-201ENST00000357085 PDE1CQ14123 709 aaPredicted RBP7.04□□□□□ -1.28
TRIM38-201ENST00000357085 PTPAQ15257 358 aa7.04□□□□□ -1.28
TRIM38-201ENST00000357085 NDUFA5Q16718 116 aa7.04□□□□□ -1.28
TRIM38-201ENST00000357085 ALDH16A1Q8IZ83 802 aa7.04□□□□□ -1.28
TRIM38-201ENST00000357085 NLRP7Q8WX94 980 aa7.04□□□□□ -1.28
TRIM38-201ENST00000357085 TMEM109Q9BVC6 243 aa7.04□□□□□ -1.28
TRIM38-201ENST00000357085 ZHX3Q9H4I2 956 aa7.04□□□□□ -1.28
TRIM38-201ENST00000357085 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.04□□□□□ -1.28
TRIM38-201ENST00000357085 HOXB6P17509 224 aaKnown RBP7.04□□□□□ -1.28
TRIM38-201ENST00000357085 CALB2P22676 271 aa7.04□□□□□ -1.28
TRIM38-201ENST00000357085 GSTT1P30711 240 aa7.04□□□□□ -1.28
TRIM38-201ENST00000357085 CCNG1P51959 295 aa7.04□□□□□ -1.28
TRIM38-201ENST00000357085 SLC5A9Q2M3M2 681 aa7.04□□□□□ -1.28
TRIM38-201ENST00000357085 NAALADL2Q58DX5 795 aa7.04□□□□□ -1.28
TRIM38-201ENST00000357085 FSCBQ5H9T9 825 aa7.04□□□□□ -1.28
TRIM38-201ENST00000357085 FRMD5Q7Z6J6 570 aa7.04□□□□□ -1.28
TRIM38-201ENST00000357085 SCFD1Q8WVM8 642 aa7.04□□□□□ -1.28
TRIM38-201ENST00000357085 EBF2Q9HAK2 575 aa7.04□□□□□ -1.28
TRIM38-201ENST00000357085 CCDC162PA2VCL2 907 aa7.03□□□□□ -1.28
TRIM38-201ENST00000357085 NCK2O43639 380 aa7.03□□□□□ -1.28
TRIM38-201ENST00000357085 PHF2O75151 1096 aa7.03□□□□□ -1.28
TRIM38-201ENST00000357085 AFPP02771 609 aaKnown RBP7.03□□□□□ -1.28
TRIM38-201ENST00000357085 PCCAP05165 728 aaPredicted RBP7.03□□□□□ -1.28
TRIM38-201ENST00000357085 NLRP11P59045 1033 aaKnown RBP7.03□□□□□ -1.28
TRIM38-201ENST00000357085 PIK3AP1Q6ZUJ8 805 aa7.03□□□□□ -1.28
TRIM38-201ENST00000357085 FRA10AC1Q70Z53 315 aa7.03□□□□□ -1.28
TRIM38-201ENST00000357085 LONP2Q86WA8 852 aa7.03□□□□□ -1.28
TRIM38-201ENST00000357085 TRIM33Q9UPN9 1127 aa7.03□□□□□ -1.28
TRIM38-201ENST00000357085 SMARCA1P28370 1054 aa7.03□□□□□ -1.28
TRIM38-201ENST00000357085 KRT81Q14533 505 aa7.03□□□□□ -1.28
TRIM38-201ENST00000357085 SETD3Q86TU7 594 aaPredicted RBP7.03□□□□□ -1.28
TRIM38-201ENST00000357085 ICA1LQ8NDH6 482 aa7.03□□□□□ -1.28
TRIM38-201ENST00000357085 PIGOQ8TEQ8 1089 aa7.03□□□□□ -1.28
TRIM38-201ENST00000357085 WWP1Q9H0M0 922 aa7.03□□□□□ -1.28
TRIM38-201ENST00000357085 ECM29Q5VYK3 1845 aa7.03□□□□□ -1.28
TRIM38-201ENST00000357085 C5orf60A6NFR6 353 aa7.03□□□□□ -1.28
TRIM38-201ENST00000357085 HAUS5O94927 633 aa7.03□□□□□ -1.28
TRIM38-201ENST00000357085 SLC1A1P43005 524 aa7.03□□□□□ -1.28
TRIM38-201ENST00000357085 COPS6Q7L5N1 327 aa7.03□□□□□ -1.28
TRIM38-201ENST00000357085 STK32AQ8WU08 396 aa7.03□□□□□ -1.28
TRIM38-201ENST00000357085 CASKIN2Q8WXE0 1202 aa7.03□□□□□ -1.28
TRIM38-201ENST00000357085 CLMNQ96JQ2 1002 aa7.03□□□□□ -1.28
TRIM38-201ENST00000357085 RNPEPL1Q9HAU8 725 aa7.03□□□□□ -1.28
TRIM38-201ENST00000357085 SCN4AP35499 1836 aa7.03□□□□□ -1.28
TRIM38-201ENST00000357085 BTBD18B2RXH4 712 aa7.03□□□□□ -1.28
TRIM38-201ENST00000357085 TCP11X1B4DZS4 312 aa7.03□□□□□ -1.28
TRIM38-201ENST00000357085 KPNA2P52292 529 aaKnown RBP7.03□□□□□ -1.28
TRIM38-201ENST00000357085 DRG2P55039 364 aaKnown RBP7.03□□□□□ -1.28
TRIM38-201ENST00000357085 PLTPP55058 493 aa7.03□□□□□ -1.28
TRIM38-201ENST00000357085 DCTN2Q13561 401 aaKnown RBP7.03□□□□□ -1.28
TRIM38-201ENST00000357085 LDHAL6AQ6ZMR3 332 aa7.03□□□□□ -1.28
TRIM38-201ENST00000357085 ANKRD13CQ8N6S4 541 aa7.03□□□□□ -1.28
TRIM38-201ENST00000357085 RPGRQ92834 1020 aaKnown RBP7.03□□□□□ -1.28
TRIM38-201ENST00000357085 ZNF711Q9Y462 761 aa7.03□□□□□ -1.28
TRIM38-201ENST00000357085 PCDHGC5Q9Y5F6 944 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms