RNA–Protein interactions for RNA: ENST00000356384.4

RXRA-201, Transcript of retinoid X receptor alpha, humanhuman

TSL 5

Gene RXRA, Length 5,770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-201ENST00000356384 CTIFO43310 598 aaKnown RBP17.16■□□□□ 0.34
RXRA-201ENST00000356384 ULK4Q96C45 1275 aa17.16■□□□□ 0.34
RXRA-201ENST00000356384 CHCHD3Q9NX63 227 aaKnown RBP17.16■□□□□ 0.34
RXRA-201ENST00000356384 CNOT8Q9UFF9 292 aaKnown RBP17.16■□□□□ 0.34
RXRA-201ENST00000356384 STAP2Q9UGK3 403 aa17.16■□□□□ 0.34
RXRA-201ENST00000356384 DNAJC12Q9UKB3 198 aa17.16■□□□□ 0.34
RXRA-201ENST00000356384 ATP10DQ9P241 1426 aa17.16■□□□□ 0.34
RXRA-201ENST00000356384 PDHA1P08559 390 aa17.16■□□□□ 0.34
RXRA-201ENST00000356384 ATP1A3P13637 1013 aa17.16■□□□□ 0.34
RXRA-201ENST00000356384 SLFN12LQ6IEE8 588 aa17.16■□□□□ 0.34
RXRA-201ENST00000356384 NLGN1Q8N2Q7 840 aa17.16■□□□□ 0.34
RXRA-201ENST00000356384 KCNV2Q8TDN2 545 aa17.16■□□□□ 0.34
RXRA-201ENST00000356384 PUS7LQ9H0K6 701 aaKnown RBP17.16■□□□□ 0.34
RXRA-201ENST00000356384 GPR108Q9NPR9 543 aa17.16■□□□□ 0.34
RXRA-201ENST00000356384 USP17L3A6NCW0 530 aa17.15■□□□□ 0.34
RXRA-201ENST00000356384 USP17L4A6NCW7 530 aa17.15■□□□□ 0.34
RXRA-201ENST00000356384 SRGAP2O75044 1071 aa17.15■□□□□ 0.34
RXRA-201ENST00000356384 RECQLP46063 649 aaPredicted RBP17.15■□□□□ 0.34
RXRA-201ENST00000356384 ALCAMQ13740 583 aa17.15■□□□□ 0.34
RXRA-201ENST00000356384 PI16Q6UXB8 463 aa17.15■□□□□ 0.34
RXRA-201ENST00000356384 USP17L1Q7RTZ2 530 aa17.15■□□□□ 0.34
RXRA-201ENST00000356384 MLXIPLQ9NP71 852 aa17.15■□□□□ 0.34
RXRA-201ENST00000356384 CCDC188H7C350 402 aa17.15■□□□□ 0.34
RXRA-201ENST00000356384 MFAP3LO75121 409 aa17.15■□□□□ 0.34
RXRA-201ENST00000356384 NFX1Q12986 1120 aaKnown RBP17.15■□□□□ 0.34
RXRA-201ENST00000356384 PROSER3Q2NL68 480 aa17.15■□□□□ 0.34
RXRA-201ENST00000356384 FBXO38Q6PIJ6 1188 aa17.15■□□□□ 0.34
RXRA-201ENST00000356384 ABT1Q9ULW3 272 aaKnown RBP17.15■□□□□ 0.34
RXRA-201ENST00000356384 POU5F1BQ06416 359 aa17.15■□□□□ 0.34
RXRA-201ENST00000356384 CCDC85BQ15834 202 aaPredicted RBP17.15■□□□□ 0.34
RXRA-201ENST00000356384 BEND6Q5SZJ8 279 aaPredicted RBP17.15■□□□□ 0.34
RXRA-201ENST00000356384 PPP4R3CPQ6ZMV5 832 aa17.15■□□□□ 0.34
RXRA-201ENST00000356384 AIFM3Q96NN9 605 aa17.15■□□□□ 0.34
RXRA-201ENST00000356384 ZSWIM5Q9P217 1185 aa17.15■□□□□ 0.34
RXRA-201ENST00000356384 NPC1L1Q9UHC9 1359 aa17.15■□□□□ 0.34
RXRA-201ENST00000356384 CATSPER4Q7RTX7 472 aa17.15■□□□□ 0.34
RXRA-201ENST00000356384 TAGAPQ8N103 731 aa17.15■□□□□ 0.34
RXRA-201ENST00000356384 SLC26A7Q8TE54 656 aa17.15■□□□□ 0.34
RXRA-201ENST00000356384 RBM41Q96IZ5 413 aaKnown RBP17.15■□□□□ 0.34
RXRA-201ENST00000356384 TTC7AQ9ULT0 858 aaPredicted RBP17.15■□□□□ 0.34
RXRA-201ENST00000356384 OCM2P0CE71 109 aa17.14■□□□□ 0.33
RXRA-201ENST00000356384 OCMP0CE72 109 aaPredicted RBP17.14■□□□□ 0.33
RXRA-201ENST00000356384 IFNAR1P17181 557 aa17.14■□□□□ 0.33
RXRA-201ENST00000356384 MECOMQ03112 1051 aa17.14■□□□□ 0.33
RXRA-201ENST00000356384 ADA2Q9NZK5 511 aa17.14■□□□□ 0.33
RXRA-201ENST00000356384 DCTN4Q9UJW0 460 aa17.14■□□□□ 0.33
RXRA-201ENST00000356384 KIAA1755Q5JYT7 1200 aa17.14■□□□□ 0.33
RXRA-201ENST00000356384 PIGOQ8TEQ8 1089 aa17.14■□□□□ 0.33
RXRA-201ENST00000356384 DIS3Q9Y2L1 958 aaKnown RBP17.14■□□□□ 0.33
RXRA-201ENST00000356384 ZRANB2O95218 330 aaKnown RBP eCLIP17.14■□□□□ 0.33
RXRA-201ENST00000356384 PNMA6AP0CW24 399 aaPredicted RBP17.14■□□□□ 0.33
RXRA-201ENST00000356384 STX18Q9P2W9 335 aaKnown RBP17.14■□□□□ 0.33
RXRA-201ENST00000356384 TSR3Q9UJK0 312 aaKnown RBP17.14■□□□□ 0.33
RXRA-201ENST00000356384 ERBB4Q15303 1308 aa17.14■□□□□ 0.33
RXRA-201ENST00000356384 HNRNPH2P55795 449 aaKnown RBP17.13■□□□□ 0.33
RXRA-201ENST00000356384 ERFEQ4G0M1 354 aa17.13■□□□□ 0.33
RXRA-201ENST00000356384 DIAPH2O60879 1101 aa17.13■□□□□ 0.33
RXRA-201ENST00000356384 TMCC1O94876 653 aa17.13■□□□□ 0.33
RXRA-201ENST00000356384 HAUS5O94927 633 aa17.13■□□□□ 0.33
RXRA-201ENST00000356384 YIPF3Q9GZM5 350 aa17.13■□□□□ 0.33
RXRA-201ENST00000356384 TRIM33Q9UPN9 1127 aa17.13■□□□□ 0.33
RXRA-201ENST00000356384 GDAQ9Y2T3 454 aa17.13■□□□□ 0.33
RXRA-201ENST00000356384 PNMA6FA0A0J9YX94 578 aa17.13■□□□□ 0.33
RXRA-201ENST00000356384 ZSCAN9O15535 394 aaPredicted RBP17.13■□□□□ 0.33
RXRA-201ENST00000356384 CREB3O43889 395 aa17.13■□□□□ 0.33
RXRA-201ENST00000356384 DNAJC6O75061 913 aa17.13■□□□□ 0.33
RXRA-201ENST00000356384 AARSP49588 968 aaKnown RBP eCLIP17.13■□□□□ 0.338e-6■■■■■ 52.4
RXRA-201ENST00000356384 TOGARAM2Q6ZUX3 1019 aa17.13■□□□□ 0.33
RXRA-201ENST00000356384 TTC8Q8TAM2 541 aa17.13■□□□□ 0.33
RXRA-201ENST00000356384 SYNGAP1Q96PV0 1343 aa17.13■□□□□ 0.33
RXRA-201ENST00000356384 ARHGEF9O43307 516 aa17.13■□□□□ 0.33
RXRA-201ENST00000356384 RXRBP28702 533 aa17.13■□□□□ 0.33
RXRA-201ENST00000356384 SMAD1Q15797 465 aaKnown RBP17.13■□□□□ 0.33
RXRA-201ENST00000356384 KRT39Q6A163 491 aa17.13■□□□□ 0.33
RXRA-201ENST00000356384 SCN4BQ8IWT1 228 aa17.13■□□□□ 0.33
RXRA-201ENST00000356384 THEM5Q8N1Q8 247 aa17.13■□□□□ 0.33
RXRA-201ENST00000356384 DHX36Q9H2U1 1008 aaKnown RBP17.13■□□□□ 0.33
RXRA-201ENST00000356384 ASNSD1Q9NWL6 643 aa17.13■□□□□ 0.33
RXRA-201ENST00000356384 NEMP1O14524 444 aa17.12■□□□□ 0.33
RXRA-201ENST00000356384 LDHAP00338 332 aaKnown RBP17.12■□□□□ 0.33
RXRA-201ENST00000356384 SERPINB2P05120 415 aa17.12■□□□□ 0.33
RXRA-201ENST00000356384 TFDP2Q14188 446 aa17.12■□□□□ 0.33
RXRA-201ENST00000356384 EFTUD2Q15029 972 aaKnown RBP eCLIP17.12■□□□□ 0.339e-7■■■■■ 33.5
RXRA-201ENST00000356384 SLC27A3Q5K4L6 730 aa17.12■□□□□ 0.33
RXRA-201ENST00000356384 TEDDM1Q5T9Z0 273 aa17.12■□□□□ 0.33
RXRA-201ENST00000356384 OR9Q1Q8NGQ5 310 aa17.12■□□□□ 0.33
RXRA-201ENST00000356384 OSBP2Q969R2 916 aa17.12■□□□□ 0.33
RXRA-201ENST00000356384 PI4KBQ9UBF8 816 aa17.12■□□□□ 0.33
RXRA-201ENST00000356384 ZNF212Q9UDV6 495 aa17.12■□□□□ 0.33
RXRA-201ENST00000356384 MYL3P08590 195 aa17.12■□□□□ 0.33
RXRA-201ENST00000356384 MAGOHP61326 146 aaKnown RBP17.12■□□□□ 0.33
RXRA-201ENST00000356384 NKX1-1Q15270 411 aaPredicted RBP17.12■□□□□ 0.33
RXRA-201ENST00000356384 PPM1NQ8N819 430 aa17.12■□□□□ 0.33
RXRA-201ENST00000356384 STRIP2Q9ULQ0 834 aa17.12■□□□□ 0.33
RXRA-201ENST00000356384 KLHL38Q2WGJ6 581 aa17.12■□□□□ 0.33
RXRA-201ENST00000356384 CATSPER3Q86XQ3 398 aa17.12■□□□□ 0.33
RXRA-201ENST00000356384 GSPT2Q8IYD1 628 aaKnown RBP17.12■□□□□ 0.33
RXRA-201ENST00000356384 CDV3Q9UKY7 258 aaKnown RBP17.12■□□□□ 0.33
RXRA-201ENST00000356384 ZBTB1Q9Y2K1 713 aa17.12■□□□□ 0.33
RXRA-201ENST00000356384 EIF4E1BA6NMX2 242 aaKnown RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms