RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 MUC3AQ02505 3323 aa18.79■□□□□ 0.6
PDLIM7-201ENST00000355572 A0A087WWV3 80 aa18.78■□□□□ 0.6
PDLIM7-201ENST00000355572 A0A087WZ62 844 aa18.78■□□□□ 0.6
PDLIM7-201ENST00000355572 MAFO75444 373 aaPredicted RBP18.78■□□□□ 0.6
PDLIM7-201ENST00000355572 CD2BP2O95400 341 aaKnown RBP18.78■□□□□ 0.6
PDLIM7-201ENST00000355572 ITGB1P05556 798 aa18.78■□□□□ 0.6
PDLIM7-201ENST00000355572 ATF7P17544 494 aaPredicted RBP18.78■□□□□ 0.6
PDLIM7-201ENST00000355572 EIF4BP23588 611 aaKnown RBP18.78■□□□□ 0.6
PDLIM7-201ENST00000355572 IRS1P35568 1242 aa18.78■□□□□ 0.6
PDLIM7-201ENST00000355572 FAM189BP81408 668 aa18.78■□□□□ 0.6
PDLIM7-201ENST00000355572 CYP4A11Q02928 519 aa18.78■□□□□ 0.6
PDLIM7-201ENST00000355572 MAP7D2Q96T17 732 aa18.78■□□□□ 0.6
PDLIM7-201ENST00000355572 FDXACB1Q9BRP7 624 aaPredicted RBP18.78■□□□□ 0.6
PDLIM7-201ENST00000355572 LXNQ9BS40 222 aa18.78■□□□□ 0.6
PDLIM7-201ENST00000355572 UBE2ZQ9H832 354 aaPredicted RBP18.78■□□□□ 0.6
PDLIM7-201ENST00000355572 DENND3A2RUS2 1198 aa18.77■□□□□ 0.6
PDLIM7-201ENST00000355572 TBX3O15119 743 aa18.77■□□□□ 0.6
PDLIM7-201ENST00000355572 GPR182O15218 404 aa18.77■□□□□ 0.6
PDLIM7-201ENST00000355572 QARSP47897 775 aaKnown RBP18.77■□□□□ 0.6
PDLIM7-201ENST00000355572 EPHA7Q15375 998 aa18.77■□□□□ 0.6
PDLIM7-201ENST00000355572 LRRC55Q6ZSA7 311 aa18.77■□□□□ 0.6
PDLIM7-201ENST00000355572 SLC24A5Q71RS6 500 aa18.77■□□□□ 0.6
PDLIM7-201ENST00000355572 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.77■□□□□ 0.6
PDLIM7-201ENST00000355572 SYMPKQ92797 1274 aaKnown RBP18.77■□□□□ 0.6
PDLIM7-201ENST00000355572 UHRF1Q96T88 793 aaPredicted RBP18.77■□□□□ 0.6
PDLIM7-201ENST00000355572 CYP26B1Q9NR63 512 aa18.77■□□□□ 0.6
PDLIM7-201ENST00000355572 COG5Q9UP83 839 aa18.77■□□□□ 0.6
PDLIM7-201ENST00000355572 PLAGL2Q9UPG8 496 aa18.77■□□□□ 0.6
PDLIM7-201ENST00000355572 TBKBP1A7MCY6 615 aa18.76■□□□□ 0.59
PDLIM7-201ENST00000355572 SLITRK3O94933 977 aa18.76■□□□□ 0.59
PDLIM7-201ENST00000355572 STAG3L1P0CL83 205 aa18.76■□□□□ 0.59
PDLIM7-201ENST00000355572 RBM25P49756 843 aaKnown RBP18.76■□□□□ 0.59
PDLIM7-201ENST00000355572 ADGRD2Q7Z7M1 963 aa18.76■□□□□ 0.59
PDLIM7-201ENST00000355572 KLHL23Q8NBE8 558 aa18.76■□□□□ 0.59
PDLIM7-201ENST00000355572 SPPL3Q8TCT6 385 aa18.76■□□□□ 0.59
PDLIM7-201ENST00000355572 NLRP7Q8WX94 980 aa18.76■□□□□ 0.59
PDLIM7-201ENST00000355572 MTMR9Q96QG7 549 aa18.76■□□□□ 0.59
PDLIM7-201ENST00000355572 CWH43Q9H720 699 aa18.76■□□□□ 0.59
PDLIM7-201ENST00000355572 XPNPEP1Q9NQW7 623 aa18.76■□□□□ 0.59
PDLIM7-201ENST00000355572 LRFN2Q9ULH4 789 aa18.76■□□□□ 0.59
PDLIM7-201ENST00000355572 PCDHB7Q9Y5E2 793 aa18.76■□□□□ 0.59
PDLIM7-201ENST00000355572 MEIS3P2A8K0S8 358 aa18.75■□□□□ 0.59
PDLIM7-201ENST00000355572 LINC01565O15544 149 aa18.75■□□□□ 0.59
PDLIM7-201ENST00000355572 RB1P06400 928 aa18.75■□□□□ 0.59
PDLIM7-201ENST00000355572 P4HBP07237 508 aaKnown RBP18.75■□□□□ 0.59
PDLIM7-201ENST00000355572 ATP2B1P20020 1258 aa18.75■□□□□ 0.59
PDLIM7-201ENST00000355572 KCNA5P22460 613 aa18.75■□□□□ 0.59
PDLIM7-201ENST00000355572 TMOD1P28289 359 aa18.75■□□□□ 0.59
PDLIM7-201ENST00000355572 LTBRP36941 435 aa18.75■□□□□ 0.59
PDLIM7-201ENST00000355572 DLX2Q07687 328 aaPredicted RBP18.75■□□□□ 0.59
PDLIM7-201ENST00000355572 HYAL1Q12794 435 aa18.75■□□□□ 0.59
PDLIM7-201ENST00000355572 NBR1Q14596 966 aa18.75■□□□□ 0.59
PDLIM7-201ENST00000355572 COL19A1Q14993 1142 aa18.75■□□□□ 0.59
PDLIM7-201ENST00000355572 CLLU1OSQ5K130 101 aa18.75■□□□□ 0.59
PDLIM7-201ENST00000355572 ECHDC2Q86YB7 292 aa18.75■□□□□ 0.59
PDLIM7-201ENST00000355572 RHPN2Q8IUC4 686 aa18.75■□□□□ 0.59
PDLIM7-201ENST00000355572 C4orf19Q8IY42 314 aa18.75■□□□□ 0.59
PDLIM7-201ENST00000355572 KHSRPQ92945 711 aaKnown RBP eCLIP18.75■□□□□ 0.59
PDLIM7-201ENST00000355572 TMEM143Q96AN5 459 aa18.75■□□□□ 0.59
PDLIM7-201ENST00000355572 CASD1Q96PB1 797 aa18.75■□□□□ 0.59
PDLIM7-201ENST00000355572 EIF2AK1Q9BQI3 630 aaKnown RBP18.75■□□□□ 0.59
PDLIM7-201ENST00000355572 DHX33Q9H6R0 707 aaKnown RBP18.75■□□□□ 0.59
PDLIM7-201ENST00000355572 MINDY3Q9H8M7 445 aa18.75■□□□□ 0.59
PDLIM7-201ENST00000355572 IFT122Q9HBG6 1241 aa18.75■□□□□ 0.59
PDLIM7-201ENST00000355572 CD320Q9NPF0 282 aa18.75■□□□□ 0.59
PDLIM7-201ENST00000355572 C1orf112Q9NSG2 853 aa18.75■□□□□ 0.59
PDLIM7-201ENST00000355572 SUCLA2Q9P2R7 463 aaPredicted RBP18.75■□□□□ 0.59
PDLIM7-201ENST00000355572 POTEMA6NI47 508 aa18.74■□□□□ 0.59
PDLIM7-201ENST00000355572 H3BQ06 376 aaPredicted RBP18.74■□□□□ 0.59
PDLIM7-201ENST00000355572 TNFRSF10AO00220 468 aa18.74■□□□□ 0.59
PDLIM7-201ENST00000355572 PBX3P40426 434 aa18.74■□□□□ 0.59
PDLIM7-201ENST00000355572 CALCRLQ16602 461 aa18.74■□□□□ 0.59
PDLIM7-201ENST00000355572 ZNF598Q86UK7 904 aaKnown RBP18.74■□□□□ 0.59
PDLIM7-201ENST00000355572 CEP170P1Q96L14 293 aa18.74■□□□□ 0.59
PDLIM7-201ENST00000355572 NLRP4Q96MN2 994 aa18.74■□□□□ 0.59
PDLIM7-201ENST00000355572 C11orf84Q9BUA3 381 aaPredicted RBP18.74■□□□□ 0.59
PDLIM7-201ENST00000355572 NSUN3Q9H649 340 aaKnown RBP18.74■□□□□ 0.59
PDLIM7-201ENST00000355572 BRMS1Q9HCU9 246 aa18.74■□□□□ 0.59
PDLIM7-201ENST00000355572 TYW1Q9NV66 732 aaKnown RBP18.74■□□□□ 0.59
PDLIM7-201ENST00000355572 TMEM161AQ9NX61 479 aa18.74■□□□□ 0.59
PDLIM7-201ENST00000355572 IL9P15248 144 aa18.73■□□□□ 0.59
PDLIM7-201ENST00000355572 YWHABP31946 246 aaKnown RBP18.73■□□□□ 0.59
PDLIM7-201ENST00000355572 MCM7P33993 719 aa18.73■□□□□ 0.59
PDLIM7-201ENST00000355572 TXKP42681 527 aa18.73■□□□□ 0.59
PDLIM7-201ENST00000355572 PTPROQ16827 1216 aa18.73■□□□□ 0.59
PDLIM7-201ENST00000355572 TIGD5Q53EQ6 642 aa18.73■□□□□ 0.59
PDLIM7-201ENST00000355572 POF1BQ8WVV4 589 aa18.73■□□□□ 0.59
PDLIM7-201ENST00000355572 P2RX5Q93086 422 aa18.73■□□□□ 0.59
PDLIM7-201ENST00000355572 C8orf76Q96K31 380 aa18.73■□□□□ 0.59
PDLIM7-201ENST00000355572 SCLT1Q96NL6 688 aa18.73■□□□□ 0.59
PDLIM7-201ENST00000355572 HSD17B14Q9BPX1 270 aa18.73■□□□□ 0.59
PDLIM7-201ENST00000355572 ELAC1Q9H777 363 aaKnown RBP18.73■□□□□ 0.59
PDLIM7-201ENST00000355572 TTC12Q9H892 705 aaPredicted RBP18.73■□□□□ 0.59
PDLIM7-201ENST00000355572 RWDD3Q9Y3V2 267 aa18.73■□□□□ 0.59
PDLIM7-201ENST00000355572 NEMFO60524 1076 aa18.72■□□□□ 0.59
PDLIM7-201ENST00000355572 LONRF3Q496Y0 759 aa18.72■□□□□ 0.59
PDLIM7-201ENST00000355572 TPH2Q8IWU9 490 aa18.72■□□□□ 0.59
PDLIM7-201ENST00000355572 SLFN12Q8IYM2 578 aa18.72■□□□□ 0.59
PDLIM7-201ENST00000355572 COLGALT1Q8NBJ5 622 aa18.72■□□□□ 0.59
PDLIM7-201ENST00000355572 NEK9Q8TD19 979 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms