RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 PAPOLAP51003 745 aaKnown RBP19.3■□□□□ 0.68
COL18A1-202ENST00000355480 FRA10AC1Q70Z53 315 aa19.3■□□□□ 0.68
COL18A1-202ENST00000355480 MXD3Q9BW11 206 aa19.3■□□□□ 0.68
COL18A1-202ENST00000355480 POLD4Q9HCU8 107 aa19.3■□□□□ 0.68
COL18A1-202ENST00000355480 KRT82Q9NSB4 513 aa19.3■□□□□ 0.68
COL18A1-202ENST00000355480 MFAP3LO75121 409 aa19.29■□□□□ 0.68
COL18A1-202ENST00000355480 NSUN2Q08J23 767 aaKnown RBP eCLIP19.29■□□□□ 0.68
COL18A1-202ENST00000355480 MAML1Q92585 1016 aa19.29■□□□□ 0.68
COL18A1-202ENST00000355480 IFT43Q96FT9 208 aa19.29■□□□□ 0.68
COL18A1-202ENST00000355480 RBM41Q96IZ5 413 aaKnown RBP19.29■□□□□ 0.68
COL18A1-202ENST00000355480 UBE4BO95155 1302 aa19.29■□□□□ 0.68
COL18A1-202ENST00000355480 ENAHQ8N8S7 591 aaPredicted RBP19.29■□□□□ 0.68
COL18A1-202ENST00000355480 ZNF668Q96K58 619 aaPredicted RBP19.29■□□□□ 0.68
COL18A1-202ENST00000355480 NEMP1O14524 444 aa19.29■□□□□ 0.68
COL18A1-202ENST00000355480 KIAA1755Q5JYT7 1200 aa19.29■□□□□ 0.68
COL18A1-202ENST00000355480 HEY1Q9Y5J3 304 aa19.29■□□□□ 0.68
COL18A1-202ENST00000355480 POTEB3A0JP26 581 aa19.29■□□□□ 0.68
COL18A1-202ENST00000355480 POTECB2RU33 542 aa19.29■□□□□ 0.68
COL18A1-202ENST00000355480 HOXD10P28358 340 aa19.29■□□□□ 0.68
COL18A1-202ENST00000355480 POTEBQ6S5H4 581 aa19.29■□□□□ 0.68
COL18A1-202ENST00000355480 HEMGNQ9BXL5 484 aa19.29■□□□□ 0.68
COL18A1-202ENST00000355480 C2orf40Q9H1Z8 148 aa19.29■□□□□ 0.68
COL18A1-202ENST00000355480 CEP72Q9P209 647 aa19.29■□□□□ 0.68
COL18A1-202ENST00000355480 NCAPD2Q15021 1401 aa19.29■□□□□ 0.68
COL18A1-202ENST00000355480 TRIM49BA6NDI0 452 aa19.29■□□□□ 0.68
COL18A1-202ENST00000355480 P4HBP07237 508 aaKnown RBP19.29■□□□□ 0.68
COL18A1-202ENST00000355480 FCER1AP12319 257 aa19.29■□□□□ 0.68
COL18A1-202ENST00000355480 QARSP47897 775 aaKnown RBP19.29■□□□□ 0.68
COL18A1-202ENST00000355480 TFDP2Q14188 446 aa19.29■□□□□ 0.68
COL18A1-202ENST00000355480 ATG16L1Q676U5 607 aa19.29■□□□□ 0.68
COL18A1-202ENST00000355480 AFG1LQ8WV93 481 aa19.29■□□□□ 0.68
COL18A1-202ENST00000355480 SPATA33Q96N06 139 aa19.29■□□□□ 0.68
COL18A1-202ENST00000355480 FOXD4Q12950 439 aaPredicted RBP19.28■□□□□ 0.68
COL18A1-202ENST00000355480 FAM133BQ5BKY9 247 aaKnown RBP19.28■□□□□ 0.68
COL18A1-202ENST00000355480 TEX2Q8IWB9 1127 aa19.28■□□□□ 0.68
COL18A1-202ENST00000355480 CCDC124Q96CT7 223 aaKnown RBP19.28■□□□□ 0.68
COL18A1-202ENST00000355480 SAYSD1Q9NPB0 183 aa19.28■□□□□ 0.68
COL18A1-202ENST00000355480 CPDO75976 1380 aa19.28■□□□□ 0.68
COL18A1-202ENST00000355480 MAP2K2P36507 400 aa19.28■□□□□ 0.68
COL18A1-202ENST00000355480 COASYQ13057 564 aa19.28■□□□□ 0.68
COL18A1-202ENST00000355480 RASIP1Q5U651 963 aa19.28■□□□□ 0.68
COL18A1-202ENST00000355480 TTC37Q6PGP7 1564 aa19.28■□□□□ 0.68
COL18A1-202ENST00000355480 F5H6K3 240 aa19.28■□□□□ 0.68
COL18A1-202ENST00000355480 ATP8B1O43520 1251 aa19.28■□□□□ 0.68
COL18A1-202ENST00000355480 KLRC3Q07444 240 aa19.28■□□□□ 0.68
COL18A1-202ENST00000355480 TSPYL2Q9H2G4 693 aaPredicted RBP19.28■□□□□ 0.68
COL18A1-202ENST00000355480 M0QYV0 167 aa19.28■□□□□ 0.68
COL18A1-202ENST00000355480 ZRANB2O95218 330 aaKnown RBP eCLIP19.28■□□□□ 0.682e-6■■■■□ 22
COL18A1-202ENST00000355480 CALB1P05937 261 aa19.28■□□□□ 0.68
COL18A1-202ENST00000355480 MFSD14CQ5VZR4 134 aa19.28■□□□□ 0.68
COL18A1-202ENST00000355480 CCDC138Q96M89 665 aa19.28■□□□□ 0.68
COL18A1-202ENST00000355480 ACAD9Q9H845 621 aa19.28■□□□□ 0.68
COL18A1-202ENST00000355480 STRIP2Q9ULQ0 834 aa19.28■□□□□ 0.68
COL18A1-202ENST00000355480 STK36Q9NRP7 1315 aa19.28■□□□□ 0.68
COL18A1-202ENST00000355480 CREB3O43889 395 aa19.27■□□□□ 0.68
COL18A1-202ENST00000355480 HSPA4LO95757 839 aa19.27■□□□□ 0.68
COL18A1-202ENST00000355480 DRP2Q13474 957 aa19.27■□□□□ 0.68
COL18A1-202ENST00000355480 GRM4Q14833 912 aa19.27■□□□□ 0.68
COL18A1-202ENST00000355480 PROM2Q8N271 834 aa19.27■□□□□ 0.68
COL18A1-202ENST00000355480 CXorf38Q8TB03 319 aa19.27■□□□□ 0.68
COL18A1-202ENST00000355480 KLHL29Q96CT2 875 aa19.27■□□□□ 0.68
COL18A1-202ENST00000355480 KRT37O76014 449 aa19.27■□□□□ 0.68
COL18A1-202ENST00000355480 EIF3BP55884 814 aaKnown RBP19.27■□□□□ 0.68
COL18A1-202ENST00000355480 C11orf70Q9BRQ4 267 aa19.27■□□□□ 0.68
COL18A1-202ENST00000355480 EDEM3Q9BZQ6 932 aa19.27■□□□□ 0.68
COL18A1-202ENST00000355480 POLR3FQ9H1D9 316 aaPredicted RBP19.27■□□□□ 0.68
COL18A1-202ENST00000355480 SUDS3Q9H7L9 328 aaPredicted RBP19.27■□□□□ 0.68
COL18A1-202ENST00000355480 ADGRL3Q9HAR2 1447 aa19.27■□□□□ 0.68
COL18A1-202ENST00000355480 LUC7L3O95232 432 aaKnown RBP19.27■□□□□ 0.68
COL18A1-202ENST00000355480 CASP1P29466 404 aa19.27■□□□□ 0.68
COL18A1-202ENST00000355480 HABP4Q5JVS0 413 aaKnown RBP19.27■□□□□ 0.68
COL18A1-202ENST00000355480 PALMO75781 387 aa19.27■□□□□ 0.68
COL18A1-202ENST00000355480 ARL4CP56559 192 aa19.27■□□□□ 0.68
COL18A1-202ENST00000355480 OXER1Q8TDS5 423 aa19.27■□□□□ 0.68
COL18A1-202ENST00000355480 DIS3Q9Y2L1 958 aaKnown RBP19.27■□□□□ 0.68
COL18A1-202ENST00000355480 SH3BGRP55822 239 aaPredicted RBP19.27■□□□□ 0.67
COL18A1-202ENST00000355480 GPC5P78333 572 aa19.27■□□□□ 0.67
COL18A1-202ENST00000355480 KIF19Q2TAC6 998 aa19.27■□□□□ 0.67
COL18A1-202ENST00000355480 CDHR2Q9BYE9 1310 aa19.27■□□□□ 0.67
COL18A1-202ENST00000355480 CUL1Q13616 776 aa19.26■□□□□ 0.67
COL18A1-202ENST00000355480 TOB2Q14106 344 aaPredicted RBP19.26■□□□□ 0.67
COL18A1-202ENST00000355480 ADGRF4Q8IZF3 695 aa19.26■□□□□ 0.67
COL18A1-202ENST00000355480 PLEKHG2Q9H7P9 1386 aa19.26■□□□□ 0.67
COL18A1-202ENST00000355480 NNMTP40261 264 aa19.26■□□□□ 0.67
COL18A1-202ENST00000355480 QRICH1Q2TAL8 776 aa19.26■□□□□ 0.67
COL18A1-202ENST00000355480 C6orf118Q5T5N4 469 aa19.26■□□□□ 0.67
COL18A1-202ENST00000355480 TTC13Q8NBP0 860 aa19.26■□□□□ 0.67
COL18A1-202ENST00000355480 TUBB6Q9BUF5 446 aa19.26■□□□□ 0.67
COL18A1-202ENST00000355480 PARD6BQ9BYG5 372 aa19.26■□□□□ 0.67
COL18A1-202ENST00000355480 GCOM2Q9BZD3 368 aaPredicted RBP19.26■□□□□ 0.67
COL18A1-202ENST00000355480 DRC3Q9H069 523 aa19.26■□□□□ 0.67
COL18A1-202ENST00000355480 FAF1Q9UNN5 650 aaPredicted RBP19.26■□□□□ 0.67
COL18A1-202ENST00000355480 CDC42BPGQ6DT37 1551 aa19.26■□□□□ 0.67
COL18A1-202ENST00000355480 SNX2O60749 519 aa19.26■□□□□ 0.67
COL18A1-202ENST00000355480 CYP19A1P11511 503 aaPredicted RBP19.26■□□□□ 0.67
COL18A1-202ENST00000355480 SDC4P31431 198 aa19.26■□□□□ 0.67
COL18A1-202ENST00000355480 ZBTB18Q99592 522 aa19.26■□□□□ 0.67
COL18A1-202ENST00000355480 POTEFA5A3E0 1075 aa19.26■□□□□ 0.67
COL18A1-202ENST00000355480 POTEIP0CG38 1075 aa19.26■□□□□ 0.67
COL18A1-202ENST00000355480 POTEGQ6S5H5 508 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms