RNA–Protein interactions for RNA: ENST00000355379.3

SCAMP3-202, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 1 (best) BASIC

Gene SCAMP3, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-202ENST00000355379 KRT9P35527 623 aa25.09■■□□□ 1.61
SCAMP3-202ENST00000355379 SMTNP53814 917 aa25.09■■□□□ 1.61
SCAMP3-202ENST00000355379 PEX3P56589 373 aa25.09■■□□□ 1.61
SCAMP3-202ENST00000355379 GRB14Q14449 540 aa25.09■■□□□ 1.61
SCAMP3-202ENST00000355379 TTLL4Q14679 1199 aa25.09■■□□□ 1.61
SCAMP3-202ENST00000355379 ARMCX2Q7L311 632 aa25.09■■□□□ 1.61
SCAMP3-202ENST00000355379 HAUS6Q7Z4H7 955 aa25.09■■□□□ 1.61
SCAMP3-202ENST00000355379 FBXO16Q8IX29 292 aaPredicted RBP25.09■■□□□ 1.61
SCAMP3-202ENST00000355379 SCFD2Q8WU76 684 aa25.09■■□□□ 1.61
SCAMP3-202ENST00000355379 VTA1Q9NP79 307 aa25.09■■□□□ 1.61
SCAMP3-202ENST00000355379 GPRC5CQ9NQ84 441 aa25.09■■□□□ 1.61
SCAMP3-202ENST00000355379 AGPAT3Q9NRZ7 376 aa25.09■■□□□ 1.61
SCAMP3-202ENST00000355379 NRBP2Q9NSY0 501 aa25.09■■□□□ 1.61
SCAMP3-202ENST00000355379 ADGRA2Q96PE1 1338 aa25.08■■□□□ 1.61
SCAMP3-202ENST00000355379 RNF225M0QZC1 329 aaPredicted RBP25.08■■□□□ 1.61
SCAMP3-202ENST00000355379 CLIC2O15247 247 aa25.08■■□□□ 1.61
SCAMP3-202ENST00000355379 TCF7P36402 384 aaPredicted RBP25.08■■□□□ 1.61
SCAMP3-202ENST00000355379 STAT5BP51692 787 aa25.08■■□□□ 1.61
SCAMP3-202ENST00000355379 RGMBQ6NW40 437 aa25.08■■□□□ 1.61
SCAMP3-202ENST00000355379 TRMT1LQ7Z2T5 733 aaKnown RBP25.08■■□□□ 1.61
SCAMP3-202ENST00000355379 GPR142Q7Z601 462 aa25.08■■□□□ 1.61
SCAMP3-202ENST00000355379 C12orf56Q8IXR9 622 aa25.08■■□□□ 1.61
SCAMP3-202ENST00000355379 SYCP3Q8IZU3 236 aa25.08■■□□□ 1.61
SCAMP3-202ENST00000355379 OR8K1Q8NGG5 319 aa25.08■■□□□ 1.61
SCAMP3-202ENST00000355379 PCMTD1Q96MG8 357 aaPredicted RBP25.08■■□□□ 1.61
SCAMP3-202ENST00000355379 GPR20Q99678 358 aa25.08■■□□□ 1.61
SCAMP3-202ENST00000355379 PASKQ96RG2 1323 aa25.08■■□□□ 1.6
SCAMP3-202ENST00000355379 RBM47A0AV96 593 aaKnown RBP25.07■■□□□ 1.6
SCAMP3-202ENST00000355379 AKAP3O75969 853 aa25.07■■□□□ 1.6
SCAMP3-202ENST00000355379 TRIM21P19474 475 aaKnown RBP25.07■■□□□ 1.6
SCAMP3-202ENST00000355379 ABCD1P33897 745 aa25.07■■□□□ 1.6
SCAMP3-202ENST00000355379 PSMC2P35998 433 aaKnown RBP25.07■■□□□ 1.6
SCAMP3-202ENST00000355379 DMP1Q13316 513 aaPredicted RBP25.07■■□□□ 1.6
SCAMP3-202ENST00000355379 MAMDC4Q6UXC1 1216 aa25.07■■□□□ 1.6
SCAMP3-202ENST00000355379 PLEKHH3Q7Z736 793 aa25.07■■□□□ 1.6
SCAMP3-202ENST00000355379 SAPCD2Q86UD0 394 aa25.07■■□□□ 1.6
SCAMP3-202ENST00000355379 TMTC1Q8IUR5 882 aa25.07■■□□□ 1.6
SCAMP3-202ENST00000355379 KSR1Q8IVT5 923 aa25.07■■□□□ 1.6
SCAMP3-202ENST00000355379 DHX37Q8IY37 1157 aaKnown RBP25.07■■□□□ 1.6
SCAMP3-202ENST00000355379 FAM167AQ96KS9 214 aa25.07■■□□□ 1.6
SCAMP3-202ENST00000355379 DNAJC7Q99615 494 aa25.07■■□□□ 1.6
SCAMP3-202ENST00000355379 EDEM3Q9BZQ6 932 aa25.07■■□□□ 1.6
SCAMP3-202ENST00000355379 XPNPEP1Q9NQW7 623 aa25.07■■□□□ 1.6
SCAMP3-202ENST00000355379 ZBED6P86452 979 aa25.07■■□□□ 1.6
SCAMP3-202ENST00000355379 MTERF2Q49AM1 385 aa25.07■■□□□ 1.6
SCAMP3-202ENST00000355379 PLPPR4Q7Z2D5 763 aa25.07■■□□□ 1.6
SCAMP3-202ENST00000355379 KCNN1Q92952 543 aa25.07■■□□□ 1.6
SCAMP3-202ENST00000355379 BORCS6Q96GS4 357 aa25.07■■□□□ 1.6
SCAMP3-202ENST00000355379 CEP89Q96ST8 783 aa25.07■■□□□ 1.6
SCAMP3-202ENST00000355379 DHX33Q9H6R0 707 aaKnown RBP25.07■■□□□ 1.6
SCAMP3-202ENST00000355379 EXOC7Q9UPT5 735 aa25.07■■□□□ 1.6
SCAMP3-202ENST00000355379 SLC15A5A6NIM6 579 aa25.06■■□□□ 1.6
SCAMP3-202ENST00000355379 USP27XA6NNY8 438 aa25.06■■□□□ 1.6
SCAMP3-202ENST00000355379 TXNP10599 105 aaKnown RBP25.06■■□□□ 1.6
SCAMP3-202ENST00000355379 SCP2P22307 547 aa25.06■■□□□ 1.6
SCAMP3-202ENST00000355379 RFC5P40937 340 aa25.06■■□□□ 1.6
SCAMP3-202ENST00000355379 NPTX2P47972 431 aa25.06■■□□□ 1.6
SCAMP3-202ENST00000355379 KLK7P49862 253 aa25.06■■□□□ 1.6
SCAMP3-202ENST00000355379 INHBEP58166 350 aa25.06■■□□□ 1.6
SCAMP3-202ENST00000355379 TARBP2Q15633 366 aaKnown RBP25.06■■□□□ 1.6
SCAMP3-202ENST00000355379 AZI2Q9H6S1 392 aa25.06■■□□□ 1.6
SCAMP3-202ENST00000355379 KMT5AQ9NQR1 393 aa25.06■■□□□ 1.6
SCAMP3-202ENST00000355379 EMSYQ7Z589 1322 aa25.05■■□□□ 1.6
SCAMP3-202ENST00000355379 H0YCG3 227 aa25.05■■□□□ 1.6
SCAMP3-202ENST00000355379 NOP56O00567 594 aaKnown RBP25.05■■□□□ 1.6
SCAMP3-202ENST00000355379 SLC16A4O15374 487 aa25.05■■□□□ 1.6
SCAMP3-202ENST00000355379 ZSCAN12O43309 604 aa25.05■■□□□ 1.6
SCAMP3-202ENST00000355379 SLC10A3P09131 477 aa25.05■■□□□ 1.6
SCAMP3-202ENST00000355379 CASP4P49662 377 aa25.05■■□□□ 1.6
SCAMP3-202ENST00000355379 KCNMA1Q12791 1236 aa25.05■■□□□ 1.6
SCAMP3-202ENST00000355379 KCNH2Q12809 1159 aa25.05■■□□□ 1.6
SCAMP3-202ENST00000355379 TSR1Q2NL82 804 aaKnown RBP25.05■■□□□ 1.6
SCAMP3-202ENST00000355379 DNTTIP2Q5QJE6 756 aaKnown RBP25.05■■□□□ 1.6
SCAMP3-202ENST00000355379 TAPT1Q6NXT6 567 aa25.05■■□□□ 1.6
SCAMP3-202ENST00000355379 CYP26C1Q6V0L0 522 aa25.05■■□□□ 1.6
SCAMP3-202ENST00000355379 TMEM161BQ8NDZ6 487 aa25.05■■□□□ 1.6
SCAMP3-202ENST00000355379 ZNF397Q8NF99 534 aaPredicted RBP25.05■■□□□ 1.6
SCAMP3-202ENST00000355379 AFPP02771 609 aaKnown RBP25.04■■□□□ 1.6
SCAMP3-202ENST00000355379 XRCC5P13010 732 aaKnown RBP25.04■■□□□ 1.6
SCAMP3-202ENST00000355379 POLGP54098 1239 aaPredicted RBP25.04■■□□□ 1.6
SCAMP3-202ENST00000355379 EMC2Q15006 297 aa25.04■■□□□ 1.6
SCAMP3-202ENST00000355379 DPP9Q86TI2 863 aa25.04■■□□□ 1.6
SCAMP3-202ENST00000355379 FAM186BQ8IYM0 893 aa25.04■■□□□ 1.6
SCAMP3-202ENST00000355379 PPP1R13BQ96KQ4 1090 aa25.04■■□□□ 1.6
SCAMP3-202ENST00000355379 IFT74Q96LB3 600 aa25.04■■□□□ 1.6
SCAMP3-202ENST00000355379 IKZF4Q9H2S9 585 aa25.04■■□□□ 1.6
SCAMP3-202ENST00000355379 TRMT1Q9NXH9 659 aaKnown RBP25.04■■□□□ 1.6
SCAMP3-202ENST00000355379 FRMD4BQ9Y2L6 1034 aa25.04■■□□□ 1.6
SCAMP3-202ENST00000355379 SIP14410 1827 aa25.03■■□□□ 1.6
SCAMP3-202ENST00000355379 CCDC169A6NNP5 214 aa25.03■■□□□ 1.6
SCAMP3-202ENST00000355379 IGF2BP3O00425 579 aaKnown RBP eCLIP25.03■■□□□ 1.6
SCAMP3-202ENST00000355379 SLC26A2P50443 739 aa25.03■■□□□ 1.6
SCAMP3-202ENST00000355379 HSDL1Q3SXM5 330 aa25.03■■□□□ 1.6
SCAMP3-202ENST00000355379 NYAP1Q6ZVC0 841 aa25.03■■□□□ 1.6
SCAMP3-202ENST00000355379 MAP4K3Q8IVH8 894 aa25.03■■□□□ 1.6
SCAMP3-202ENST00000355379 MSL3Q8N5Y2 521 aaKnown RBP25.03■■□□□ 1.6
SCAMP3-202ENST00000355379 NEK11Q8NG66 645 aa25.03■■□□□ 1.6
SCAMP3-202ENST00000355379 BBXQ8WY36 941 aaPredicted RBP25.03■■□□□ 1.6
SCAMP3-202ENST00000355379 BSNDQ8WZ55 320 aa25.03■■□□□ 1.6
SCAMP3-202ENST00000355379 SPATA33Q96N06 139 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms