RNA–Protein interactions for RNA: ENST00000355301.8

NPHP1-202, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 1,932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-202ENST00000355301 NCKAP1LP55160 1127 aa10.6□□□□□ -0.71
NPHP1-202ENST00000355301 FKBP3Q00688 224 aaKnown RBP10.6□□□□□ -0.71
NPHP1-202ENST00000355301 DMP1Q13316 513 aaPredicted RBP10.6□□□□□ -0.71
NPHP1-202ENST00000355301 EDRF1Q3B7T1 1238 aa10.6□□□□□ -0.71
NPHP1-202ENST00000355301 TCP11X2Q5H9J9 407 aa10.6□□□□□ -0.71
NPHP1-202ENST00000355301 APTXQ7Z2E3 356 aaKnown RBP10.6□□□□□ -0.71
NPHP1-202ENST00000355301 NELFCDQ8IXH7 590 aa10.6□□□□□ -0.71
NPHP1-202ENST00000355301 EXOC8Q8IYI6 725 aa10.6□□□□□ -0.71
NPHP1-202ENST00000355301 SPIRE2Q8WWL2 714 aa10.6□□□□□ -0.71
NPHP1-202ENST00000355301 CTAGE1Q96RT6 745 aa10.6□□□□□ -0.71
NPHP1-202ENST00000355301 XPO4Q9C0E2 1151 aaKnown RBP10.6□□□□□ -0.71
NPHP1-202ENST00000355301 RNPEPQ9H4A4 650 aa10.6□□□□□ -0.71
NPHP1-202ENST00000355301 ZNF215Q9UL58 517 aaPredicted RBP10.6□□□□□ -0.71
NPHP1-202ENST00000355301 TRAF3IP3Q9Y228 551 aa10.6□□□□□ -0.71
NPHP1-202ENST00000355301 IGKV6-21A0A0C4DH24 114 aa10.59□□□□□ -0.71
NPHP1-202ENST00000355301 H3BRB1 525 aa10.59□□□□□ -0.71
NPHP1-202ENST00000355301 GAS2O43903 313 aaKnown RBP10.59□□□□□ -0.71
NPHP1-202ENST00000355301 EEF1GP26641 437 aaKnown RBP10.59□□□□□ -0.71
NPHP1-202ENST00000355301 CDC25BP30305 580 aa10.59□□□□□ -0.71
NPHP1-202ENST00000355301 ARL2P36404 184 aa10.59□□□□□ -0.71
NPHP1-202ENST00000355301 NPTX2P47972 431 aa10.59□□□□□ -0.71
NPHP1-202ENST00000355301 SMTNP53814 917 aa10.59□□□□□ -0.71
NPHP1-202ENST00000355301 PEX3P56589 373 aa10.59□□□□□ -0.71
NPHP1-202ENST00000355301 SOX10P56693 466 aa10.59□□□□□ -0.71
NPHP1-202ENST00000355301 UBASH3AP57075 661 aa10.59□□□□□ -0.71
NPHP1-202ENST00000355301 GTF2BQ00403 316 aa10.59□□□□□ -0.71
NPHP1-202ENST00000355301 KCNA1Q09470 495 aa10.59□□□□□ -0.71
NPHP1-202ENST00000355301 TBC1D8BQ0IIM8 1120 aa10.59□□□□□ -0.71
NPHP1-202ENST00000355301 ZC2HC1CQ53FD0 456 aaPredicted RBP10.59□□□□□ -0.71
NPHP1-202ENST00000355301 ZC3H3Q8IXZ2 948 aaKnown RBP10.59□□□□□ -0.71
NPHP1-202ENST00000355301 TRPV1Q8NER1 839 aa10.59□□□□□ -0.71
NPHP1-202ENST00000355301 CD99L2Q8TCZ2 262 aa10.59□□□□□ -0.71
NPHP1-202ENST00000355301 TUT1Q9H6E5 874 aaKnown RBP10.59□□□□□ -0.71
NPHP1-202ENST00000355301 TYW1Q9NV66 732 aaKnown RBP10.59□□□□□ -0.71
NPHP1-202ENST00000355301 LIMA1Q9UHB6 759 aaKnown RBP10.59□□□□□ -0.71
NPHP1-202ENST00000355301 KCNG1Q9UIX4 513 aa10.59□□□□□ -0.71
NPHP1-202ENST00000355301 TRPC6Q9Y210 931 aa10.59□□□□□ -0.71
NPHP1-202ENST00000355301 KCNJ18B7U540 433 aa10.58□□□□□ -0.72
NPHP1-202ENST00000355301 K7ENM7 598 aa10.58□□□□□ -0.72
NPHP1-202ENST00000355301 CBFA2T2O43439 604 aa10.58□□□□□ -0.72
NPHP1-202ENST00000355301 DUSP11O75319 330 aaKnown RBP10.58□□□□□ -0.72
NPHP1-202ENST00000355301 FGFR1OPO95684 399 aaKnown RBP10.58□□□□□ -0.72
NPHP1-202ENST00000355301 ZNF286BP0CG31 522 aa10.58□□□□□ -0.72
NPHP1-202ENST00000355301 CPT1AP50416 773 aa10.58□□□□□ -0.72
NPHP1-202ENST00000355301 KCNJ12Q14500 433 aa10.58□□□□□ -0.72
NPHP1-202ENST00000355301 ZNF484Q5JVG2 852 aa10.58□□□□□ -0.72
NPHP1-202ENST00000355301 LRRC55Q6ZSA7 311 aa10.58□□□□□ -0.72
NPHP1-202ENST00000355301 HAUS6Q7Z4H7 955 aa10.58□□□□□ -0.72
NPHP1-202ENST00000355301 FAM114A1Q8IWE2 563 aa10.58□□□□□ -0.72
NPHP1-202ENST00000355301 TMEM161BQ8NDZ6 487 aa10.58□□□□□ -0.72
NPHP1-202ENST00000355301 ANKRD20A12PQ8NF67 263 aa10.58□□□□□ -0.72
NPHP1-202ENST00000355301 BSNDQ8WZ55 320 aa10.58□□□□□ -0.72
NPHP1-202ENST00000355301 KCNN1Q92952 543 aa10.58□□□□□ -0.72
NPHP1-202ENST00000355301 NAP1L5Q96NT1 182 aaPredicted RBP10.58□□□□□ -0.72
NPHP1-202ENST00000355301 JPH2Q9BR39 696 aaPredicted RBP10.58□□□□□ -0.72
NPHP1-202ENST00000355301 POLR3FQ9H1D9 316 aaPredicted RBP10.58□□□□□ -0.72
NPHP1-202ENST00000355301 ZMYM2Q9UBW7 1377 aa10.58□□□□□ -0.72
NPHP1-202ENST00000355301 BRCA2P51587 3418 aa10.58□□□□□ -0.72
NPHP1-202ENST00000355301 A0A1B0GTH6 734 aa10.58□□□□□ -0.72
NPHP1-202ENST00000355301 SEPT4O43236 478 aa10.58□□□□□ -0.72
NPHP1-202ENST00000355301 TGFB1I1O43294 461 aa10.58□□□□□ -0.72
NPHP1-202ENST00000355301 CALUO43852 315 aaPredicted RBP10.58□□□□□ -0.72
NPHP1-202ENST00000355301 FKTNO75072 461 aa10.58□□□□□ -0.72
NPHP1-202ENST00000355301 F2P00734 622 aa10.58□□□□□ -0.72
NPHP1-202ENST00000355301 TPM3P06753 285 aa10.58□□□□□ -0.72
NPHP1-202ENST00000355301 SCP2P22307 547 aa10.58□□□□□ -0.72
NPHP1-202ENST00000355301 ABCD1P33897 745 aa10.58□□□□□ -0.72
NPHP1-202ENST00000355301 KRT31Q15323 416 aa10.58□□□□□ -0.72
NPHP1-202ENST00000355301 NFIL3Q16649 462 aa10.58□□□□□ -0.72
NPHP1-202ENST00000355301 BRDTQ58F21 947 aaPredicted RBP10.58□□□□□ -0.72
NPHP1-202ENST00000355301 TMEM143Q96AN5 459 aa10.58□□□□□ -0.72
NPHP1-202ENST00000355301 LENG1Q96BZ8 264 aaPredicted RBP10.58□□□□□ -0.72
NPHP1-202ENST00000355301 HVCN1Q96D96 273 aa10.58□□□□□ -0.72
NPHP1-202ENST00000355301 EEF2KMTQ96G04 330 aa10.58□□□□□ -0.72
NPHP1-202ENST00000355301 ERO1AQ96HE7 468 aa10.58□□□□□ -0.72
NPHP1-202ENST00000355301 IFT74Q96LB3 600 aa10.58□□□□□ -0.72
NPHP1-202ENST00000355301 CEP63Q96MT8 703 aa10.58□□□□□ -0.72
NPHP1-202ENST00000355301 AP5M1Q9H0R1 490 aa10.58□□□□□ -0.72
NPHP1-202ENST00000355301 TMEM206Q9H813 350 aa10.58□□□□□ -0.72
NPHP1-202ENST00000355301 KMT5AQ9NQR1 393 aa10.58□□□□□ -0.72
NPHP1-202ENST00000355301 COL1A2P08123 1366 aa10.58□□□□□ -0.72
NPHP1-202ENST00000355301 CCDC169A6NNP5 214 aa10.57□□□□□ -0.72
NPHP1-202ENST00000355301 H0YCG3 227 aa10.57□□□□□ -0.72
NPHP1-202ENST00000355301 SLC16A4O15374 487 aa10.57□□□□□ -0.72
NPHP1-202ENST00000355301 INSRRP14616 1297 aa10.57□□□□□ -0.72
NPHP1-202ENST00000355301 CACNB2Q08289 660 aaPredicted RBP10.57□□□□□ -0.72
NPHP1-202ENST00000355301 NR1I3Q14994 352 aa10.57□□□□□ -0.72
NPHP1-202ENST00000355301 ARHGEF6Q15052 776 aa10.57□□□□□ -0.72
NPHP1-202ENST00000355301 PPP2R5AQ15172 486 aa10.57□□□□□ -0.72
NPHP1-202ENST00000355301 IER5Q5VY09 327 aa10.57□□□□□ -0.72
NPHP1-202ENST00000355301 GOLGA5Q8TBA6 731 aa10.57□□□□□ -0.72
NPHP1-202ENST00000355301 PXYLP1Q8TE99 480 aa10.57□□□□□ -0.72
NPHP1-202ENST00000355301 ZNF296Q8WUU4 475 aaPredicted RBP10.57□□□□□ -0.72
NPHP1-202ENST00000355301 TMEM174Q8WUU8 243 aa10.57□□□□□ -0.72
NPHP1-202ENST00000355301 TCP11Q8WWU5 503 aa10.57□□□□□ -0.72
NPHP1-202ENST00000355301 CNOT6LQ96LI5 555 aaKnown RBP10.57□□□□□ -0.72
NPHP1-202ENST00000355301 GBP3Q9H0R5 595 aa10.57□□□□□ -0.72
NPHP1-202ENST00000355301 INTS13Q9NVM9 706 aa10.57□□□□□ -0.72
NPHP1-202ENST00000355301 ARHGAP28Q9P2N2 729 aa10.57□□□□□ -0.72
NPHP1-202ENST00000355301 MAGEC2Q9UBF1 373 aaPredicted RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms