RNA–Protein interactions for RNA: ENST00000355119.8

LIMS2-202, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,045 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-202ENST00000355119 PCNX4Q63HM2 1172 aa23.74■■□□□ 1.39
LIMS2-202ENST00000355119 EMBQ6PCB8 327 aa23.74■■□□□ 1.39
LIMS2-202ENST00000355119 SND1Q7KZF4 910 aaKnown RBP eCLIP23.74■■□□□ 1.39
LIMS2-202ENST00000355119 PBKQ96KB5 322 aa23.74■■□□□ 1.39
LIMS2-202ENST00000355119 AGO4Q9HCK5 861 aaKnown RBP23.74■■□□□ 1.39
LIMS2-202ENST00000355119 RNF40O75150 1001 aa23.74■■□□□ 1.39
LIMS2-202ENST00000355119 NBPF9Q3BBW0 867 aa23.74■■□□□ 1.39
LIMS2-202ENST00000355119 TKFCQ3LXA3 575 aa23.74■■□□□ 1.39
LIMS2-202ENST00000355119 IFT20Q8IY31 132 aa23.74■■□□□ 1.39
LIMS2-202ENST00000355119 DAW1Q8N136 415 aa23.74■■□□□ 1.39
LIMS2-202ENST00000355119 GOLGA6L1Q8N7Z2 621 aa23.74■■□□□ 1.39
LIMS2-202ENST00000355119 GDAP1L1Q96MZ0 367 aa23.74■■□□□ 1.39
LIMS2-202ENST00000355119 KIAA1683Q9H0B3 1180 aa23.74■■□□□ 1.39
LIMS2-202ENST00000355119 INTS2Q9H0H0 1204 aaKnown RBP23.74■■□□□ 1.39
LIMS2-202ENST00000355119 MYOZ2Q9NPC6 264 aa23.74■■□□□ 1.39
LIMS2-202ENST00000355119 LARSQ9P2J5 1176 aaKnown RBP23.74■■□□□ 1.39
LIMS2-202ENST00000355119 F8VZ95 297 aa23.73■■□□□ 1.39
LIMS2-202ENST00000355119 KIF4AO95239 1232 aa23.73■■□□□ 1.39
LIMS2-202ENST00000355119 CCDC172P0C7W6 258 aa23.73■■□□□ 1.39
LIMS2-202ENST00000355119 CAVIN3Q969G5 261 aa23.73■■□□□ 1.39
LIMS2-202ENST00000355119 TMEM206Q9H813 350 aa23.73■■□□□ 1.39
LIMS2-202ENST00000355119 DNAJC12Q9UKB3 198 aa23.73■■□□□ 1.39
LIMS2-202ENST00000355119 K7ENM7 598 aa23.72■■□□□ 1.39
LIMS2-202ENST00000355119 DDX3XO00571 662 aaKnown RBP eCLIP23.72■■□□□ 1.39
LIMS2-202ENST00000355119 DHX15O43143 795 aaKnown RBP23.72■■□□□ 1.39
LIMS2-202ENST00000355119 EXOC3O60645 756 aa23.72■■□□□ 1.39
LIMS2-202ENST00000355119 LMNB1P20700 586 aa23.72■■□□□ 1.39
LIMS2-202ENST00000355119 DNA2P51530 1060 aa23.72■■□□□ 1.39
LIMS2-202ENST00000355119 MYL7Q01449 175 aa23.72■■□□□ 1.39
LIMS2-202ENST00000355119 NNTQ13423 1086 aa23.72■■□□□ 1.39
LIMS2-202ENST00000355119 CIAPIN1Q6FI81 312 aa23.72■■□□□ 1.39
LIMS2-202ENST00000355119 LRRC57Q8N9N7 239 aa23.72■■□□□ 1.39
LIMS2-202ENST00000355119 IL31RAQ8NI17 732 aa23.72■■□□□ 1.39
LIMS2-202ENST00000355119 PKD2L1Q9P0L9 805 aa23.72■■□□□ 1.39
LIMS2-202ENST00000355119 PNMA2Q9UL42 364 aa23.72■■□□□ 1.39
LIMS2-202ENST00000355119 GOLGA6BA6NDN3 693 aa23.72■■□□□ 1.39
LIMS2-202ENST00000355119 EVI5O60447 810 aa23.72■■□□□ 1.39
LIMS2-202ENST00000355119 PHACTR2O75167 634 aa23.72■■□□□ 1.39
LIMS2-202ENST00000355119 LYPLA2O95372 231 aa23.72■■□□□ 1.39
LIMS2-202ENST00000355119 ALAS1P13196 640 aa23.72■■□□□ 1.39
LIMS2-202ENST00000355119 NPEPPSP55786 919 aa23.72■■□□□ 1.39
LIMS2-202ENST00000355119 TNNC1P63316 161 aa23.72■■□□□ 1.39
LIMS2-202ENST00000355119 RASA3Q14644 834 aa23.72■■□□□ 1.39
LIMS2-202ENST00000355119 TPCN2Q8NHX9 752 aa23.72■■□□□ 1.39
LIMS2-202ENST00000355119 U2AF1L4Q8WU68 220 aaKnown RBP23.72■■□□□ 1.39
LIMS2-202ENST00000355119 TMEM174Q8WUU8 243 aa23.72■■□□□ 1.39
LIMS2-202ENST00000355119 PACSIN2Q9UNF0 486 aaPredicted RBP23.72■■□□□ 1.39
LIMS2-202ENST00000355119 KRT13P13646 458 aa23.71■■□□□ 1.39
LIMS2-202ENST00000355119 RFX1P22670 979 aa23.71■■□□□ 1.39
LIMS2-202ENST00000355119 BFSP1Q12934 665 aa23.71■■□□□ 1.39
LIMS2-202ENST00000355119 DRAP1Q14919 205 aaPredicted RBP23.71■■□□□ 1.39
LIMS2-202ENST00000355119 CBWD6Q4V339 395 aa23.71■■□□□ 1.39
LIMS2-202ENST00000355119 CBWD3Q5JTY5 395 aa23.71■■□□□ 1.39
LIMS2-202ENST00000355119 CBWD5Q5RIA9 395 aa23.71■■□□□ 1.39
LIMS2-202ENST00000355119 USP38Q8NB14 1042 aa23.71■■□□□ 1.39
LIMS2-202ENST00000355119 SLC30A5Q8TAD4 765 aa23.71■■□□□ 1.39
LIMS2-202ENST00000355119 SYTL5Q8TDW5 730 aaPredicted RBP23.71■■□□□ 1.39
LIMS2-202ENST00000355119 ZBTB9Q96C00 473 aa23.71■■□□□ 1.39
LIMS2-202ENST00000355119 ACCSQ96QU6 501 aa23.71■■□□□ 1.39
LIMS2-202ENST00000355119 TIPINQ9BVW5 301 aa23.71■■□□□ 1.39
LIMS2-202ENST00000355119 SLC38A10Q9HBR0 1119 aa23.71■■□□□ 1.39
LIMS2-202ENST00000355119 GDF3Q9NR23 364 aa23.71■■□□□ 1.39
LIMS2-202ENST00000355119 TBC1D22BQ9NU19 505 aa23.71■■□□□ 1.39
LIMS2-202ENST00000355119 TRIM49P0CI25 452 aa23.71■■□□□ 1.39
LIMS2-202ENST00000355119 TRIM49CP0CI26 452 aa23.71■■□□□ 1.39
LIMS2-202ENST00000355119 GGCXP38435 758 aa23.71■■□□□ 1.39
LIMS2-202ENST00000355119 QARSP47897 775 aaKnown RBP23.71■■□□□ 1.39
LIMS2-202ENST00000355119 ITGB3BPQ13352 177 aaPredicted RBP23.71■■□□□ 1.39
LIMS2-202ENST00000355119 SYCE1Q8N0S2 351 aa23.71■■□□□ 1.39
LIMS2-202ENST00000355119 PDGFDQ9GZP0 370 aaPredicted RBP23.71■■□□□ 1.39
LIMS2-202ENST00000355119 FAM204AQ9H8W3 233 aa23.71■■□□□ 1.39
LIMS2-202ENST00000355119 APEX2Q9UBZ4 518 aa23.71■■□□□ 1.39
LIMS2-202ENST00000355119 ZHX2Q9Y6X8 837 aa23.71■■□□□ 1.39
LIMS2-202ENST00000355119 MYH11P35749 1972 aa23.71■■□□□ 1.39
LIMS2-202ENST00000355119 KCNK3O14649 394 aa23.7■■□□□ 1.38
LIMS2-202ENST00000355119 CLSTN1O94985 981 aa23.7■■□□□ 1.38
LIMS2-202ENST00000355119 MRPS25P82663 173 aaKnown RBP23.7■■□□□ 1.38
LIMS2-202ENST00000355119 TNFAIP1Q13829 316 aa23.7■■□□□ 1.38
LIMS2-202ENST00000355119 SLFN11Q7Z7L1 901 aa23.7■■□□□ 1.38
LIMS2-202ENST00000355119 C12orf56Q8IXR9 622 aa23.7■■□□□ 1.38
LIMS2-202ENST00000355119 AFAP1L1Q8TED9 768 aa23.7■■□□□ 1.38
LIMS2-202ENST00000355119 HINFPQ9BQA5 517 aa23.7■■□□□ 1.38
LIMS2-202ENST00000355119 RAVER2Q9HCJ3 691 aaKnown RBP23.7■■□□□ 1.38
LIMS2-202ENST00000355119 AGPSO00116 658 aa23.69■■□□□ 1.38
LIMS2-202ENST00000355119 PLS3P13797 630 aa23.69■■□□□ 1.38
LIMS2-202ENST00000355119 RARRES1P49788 294 aa23.69■■□□□ 1.38
LIMS2-202ENST00000355119 PAK2Q13177 524 aa23.69■■□□□ 1.38
LIMS2-202ENST00000355119 MTMR1Q13613 665 aa23.69■■□□□ 1.38
LIMS2-202ENST00000355119 CPXCR1Q8N123 301 aa23.69■■□□□ 1.38
LIMS2-202ENST00000355119 LNX1Q8TBB1 728 aaPredicted RBP23.69■■□□□ 1.38
LIMS2-202ENST00000355119 VTI1AQ96AJ9 217 aa23.69■■□□□ 1.38
LIMS2-202ENST00000355119 HEXIM1O94992 359 aaKnown RBP23.69■■□□□ 1.38
LIMS2-202ENST00000355119 MRPS9P82933 396 aaKnown RBP23.69■■□□□ 1.38
LIMS2-202ENST00000355119 ALS2CLQ60I27 953 aa23.69■■□□□ 1.38
LIMS2-202ENST00000355119 INTS8Q75QN2 995 aaKnown RBP23.69■■□□□ 1.38
LIMS2-202ENST00000355119 ACTRT1Q8TDG2 376 aa23.69■■□□□ 1.38
LIMS2-202ENST00000355119 KRT12Q99456 494 aa23.69■■□□□ 1.38
LIMS2-202ENST00000355119 SUCLA2Q9P2R7 463 aaPredicted RBP23.69■■□□□ 1.38
LIMS2-202ENST00000355119 TMEM59LQ9UK28 342 aa23.69■■□□□ 1.38
LIMS2-202ENST00000355119 SAMM50Q9Y512 469 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms