RNA–Protein interactions for RNA: ENST00000354473.4

VPS72-201, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 3

Gene VPS72, Length 1,347 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-201ENST00000354473 BRAPQ7Z569 592 aa21■□□□□ 0.95
VPS72-201ENST00000354473 RTN4RL1Q86UN2 441 aaPredicted RBP21■□□□□ 0.95
VPS72-201ENST00000354473 FERMT3Q86UX7 667 aa21■□□□□ 0.95
VPS72-201ENST00000354473 RHPN2Q8IUC4 686 aa21■□□□□ 0.95
VPS72-201ENST00000354473 TMEM143Q96AN5 459 aa21■□□□□ 0.95
VPS72-201ENST00000354473 YME1L1Q96TA2 773 aa21■□□□□ 0.95
VPS72-201ENST00000354473 LRWD1Q9UFC0 647 aa21■□□□□ 0.95
VPS72-201ENST00000354473 DARSP14868 501 aaKnown RBP20.99■□□□□ 0.95
VPS72-201ENST00000354473 FOSL2P15408 326 aa20.99■□□□□ 0.95
VPS72-201ENST00000354473 SYT1P21579 422 aa20.99■□□□□ 0.95
VPS72-201ENST00000354473 EIF4BP23588 611 aaKnown RBP20.99■□□□□ 0.95
VPS72-201ENST00000354473 RPA1P27694 616 aa20.99■□□□□ 0.95
VPS72-201ENST00000354473 ATP2C1P98194 919 aaPredicted RBP20.99■□□□□ 0.95
VPS72-201ENST00000354473 CDC42EP1Q00587 391 aa20.99■□□□□ 0.95
VPS72-201ENST00000354473 HAUS3Q68CZ6 603 aa20.99■□□□□ 0.95
VPS72-201ENST00000354473 POTEGQ6S5H5 508 aa20.99■□□□□ 0.95
VPS72-201ENST00000354473 NLRP4Q96MN2 994 aa20.99■□□□□ 0.95
VPS72-201ENST00000354473 RAB34Q9BZG1 259 aa20.99■□□□□ 0.95
VPS72-201ENST00000354473 CERS4Q9HA82 394 aa20.99■□□□□ 0.95
VPS72-201ENST00000354473 A0A087WZ62 844 aa20.98■□□□□ 0.95
VPS72-201ENST00000354473 DENND3A2RUS2 1198 aa20.98■□□□□ 0.95
VPS72-201ENST00000354473 LINC01553A4QN01 128 aa20.98■□□□□ 0.95
VPS72-201ENST00000354473 GAS2O43903 313 aaKnown RBP20.98■□□□□ 0.95
VPS72-201ENST00000354473 MGEA5O60502 916 aa20.98■□□□□ 0.95
VPS72-201ENST00000354473 CCT6AP40227 531 aaKnown RBP20.98■□□□□ 0.95
VPS72-201ENST00000354473 RARRES1P49788 294 aa20.98■□□□□ 0.95
VPS72-201ENST00000354473 IL17AQ16552 155 aa20.98■□□□□ 0.95
VPS72-201ENST00000354473 DTHD1Q6ZMT9 781 aa20.98■□□□□ 0.95
VPS72-201ENST00000354473 SPRED2Q7Z698 418 aa20.98■□□□□ 0.95
VPS72-201ENST00000354473 ZNF410Q86VK4 478 aa20.98■□□□□ 0.95
VPS72-201ENST00000354473 KSR1Q8IVT5 923 aa20.98■□□□□ 0.95
VPS72-201ENST00000354473 IGSF22Q8N9C0 903 aa20.98■□□□□ 0.95
VPS72-201ENST00000354473 PRPF31Q8WWY3 499 aaKnown RBP20.98■□□□□ 0.95
VPS72-201ENST00000354473 PSPC1Q8WXF1 523 aaKnown RBP20.98■□□□□ 0.95
VPS72-201ENST00000354473 MTRQ99707 1265 aa20.98■□□□□ 0.95
VPS72-201ENST00000354473 ADAM2Q99965 735 aa20.98■□□□□ 0.95
VPS72-201ENST00000354473 FDXACB1Q9BRP7 624 aaPredicted RBP20.98■□□□□ 0.95
VPS72-201ENST00000354473 GCOM2Q9BZD3 368 aaPredicted RBP20.98■□□□□ 0.95
VPS72-201ENST00000354473 COL4A3BPQ9Y5P4 624 aa20.98■□□□□ 0.95
VPS72-201ENST00000354473 CHD7Q9P2D1 2997 aa20.97■□□□□ 0.95
VPS72-201ENST00000354473 CDH23Q9H251 3354 aa20.97■□□□□ 0.95
VPS72-201ENST00000354473 CSDE1O75534 798 aaKnown RBP20.97■□□□□ 0.95
VPS72-201ENST00000354473 IBSPP21815 317 aaPredicted RBP20.97■□□□□ 0.95
VPS72-201ENST00000354473 PDIA5Q14554 519 aa20.97■□□□□ 0.95
VPS72-201ENST00000354473 FAM43BQ6ZT52 329 aaPredicted RBP20.97■□□□□ 0.95
VPS72-201ENST00000354473 TCP11Q8WWU5 503 aa20.97■□□□□ 0.95
VPS72-201ENST00000354473 NACC1Q96RE7 527 aa20.97■□□□□ 0.95
VPS72-201ENST00000354473 GAS2L1Q99501 681 aaPredicted RBP20.97■□□□□ 0.95
VPS72-201ENST00000354473 ATP6V0A4Q9HBG4 840 aa20.97■□□□□ 0.95
VPS72-201ENST00000354473 XPNPEP1Q9NQW7 623 aa20.97■□□□□ 0.95
VPS72-201ENST00000354473 COL4A6Q14031 1691 aa20.96■□□□□ 0.95
VPS72-201ENST00000354473 USO1O60763 962 aaKnown RBP20.96■□□□□ 0.95
VPS72-201ENST00000354473 DGAT1O75907 488 aa20.96■□□□□ 0.95
VPS72-201ENST00000354473 XRCC6P12956 609 aaKnown RBP eCLIP20.96■□□□□ 0.95
VPS72-201ENST00000354473 FGFR4P22455 802 aa20.96■□□□□ 0.95
VPS72-201ENST00000354473 NPAS4Q8IUM7 802 aa20.96■□□□□ 0.95
VPS72-201ENST00000354473 SP7Q8TDD2 431 aaPredicted RBP20.96■□□□□ 0.95
VPS72-201ENST00000354473 ARNTL2Q8WYA1 636 aa20.96■□□□□ 0.95
VPS72-201ENST00000354473 RGS18Q9NS28 235 aa20.96■□□□□ 0.95
VPS72-201ENST00000354473 DBR1Q9UK59 544 aaKnown RBP20.96■□□□□ 0.95
VPS72-201ENST00000354473 MTUS1Q9ULD2 1270 aa20.96■□□□□ 0.95
VPS72-201ENST00000354473 COL4A4P53420 1690 aaPredicted RBP20.95■□□□□ 0.94
VPS72-201ENST00000354473 EPOPA6NHQ4 379 aa20.95■□□□□ 0.94
VPS72-201ENST00000354473 PP2D1A8MPX8 630 aa20.95■□□□□ 0.94
VPS72-201ENST00000354473 HSP90AA1P07900 732 aaKnown RBP20.95■□□□□ 0.94
VPS72-201ENST00000354473 LAMTOR4Q0VGL1 99 aa20.95■□□□□ 0.94
VPS72-201ENST00000354473 CRIPAKQ8N1N5 446 aa20.95■□□□□ 0.94
VPS72-201ENST00000354473 SNX29Q8TEQ0 813 aa20.95■□□□□ 0.94
VPS72-201ENST00000354473 TGS1Q96RS0 853 aaKnown RBP20.95■□□□□ 0.94
VPS72-201ENST00000354473 C1orf112Q9NSG2 853 aa20.95■□□□□ 0.94
VPS72-201ENST00000354473 STK24Q9Y6E0 443 aa20.95■□□□□ 0.94
VPS72-201ENST00000354473 STAG3L1P0CL83 205 aa20.94■□□□□ 0.94
VPS72-201ENST00000354473 SRGAP2CP0DJJ0 459 aa20.94■□□□□ 0.94
VPS72-201ENST00000354473 MUTP22033 750 aa20.94■□□□□ 0.94
VPS72-201ENST00000354473 SFPQP23246 707 aaKnown RBP eCLIP20.94■□□□□ 0.94
VPS72-201ENST00000354473 SARSP49591 514 aaKnown RBP20.94■□□□□ 0.94
VPS72-201ENST00000354473 RESTQ13127 1097 aa20.94■□□□□ 0.94
VPS72-201ENST00000354473 DSC3Q14574 896 aa20.94■□□□□ 0.94
VPS72-201ENST00000354473 ECM1Q16610 540 aa20.94■□□□□ 0.94
VPS72-201ENST00000354473 SLC24A5Q71RS6 500 aa20.94■□□□□ 0.94
VPS72-201ENST00000354473 INO80BQ9C086 356 aaPredicted RBP20.94■□□□□ 0.94
VPS72-201ENST00000354473 IFT122Q9HBG6 1241 aa20.94■□□□□ 0.94
VPS72-201ENST00000354473 LRFN2Q9ULH4 789 aa20.94■□□□□ 0.94
VPS72-201ENST00000354473 ADGRA3Q8IWK6 1321 aa20.94■□□□□ 0.94
VPS72-201ENST00000354473 NLRC5Q86WI3 1866 aa20.93■□□□□ 0.94
VPS72-201ENST00000354473 ARHGEF35A5YM69 484 aa20.93■□□□□ 0.94
VPS72-201ENST00000354473 VWA3AA6NCI4 1184 aa20.93■□□□□ 0.94
VPS72-201ENST00000354473 C9IYK1 514 aa20.93■□□□□ 0.94
VPS72-201ENST00000354473 RFXAPO00287 272 aa20.93■□□□□ 0.94
VPS72-201ENST00000354473 DGKIO75912 1065 aa20.93■□□□□ 0.94
VPS72-201ENST00000354473 ZSCAN20P17040 1043 aaPredicted RBP20.93■□□□□ 0.94
VPS72-201ENST00000354473 CDC25AP30304 524 aa20.93■□□□□ 0.94
VPS72-201ENST00000354473 ERVK-21P61565 698 aa20.93■□□□□ 0.94
VPS72-201ENST00000354473 ADGRE1Q14246 886 aa20.93■□□□□ 0.94
VPS72-201ENST00000354473 KRT79Q5XKE5 535 aa20.93■□□□□ 0.94
VPS72-201ENST00000354473 ARL6IP4Q66PJ3 421 aaKnown RBP20.93■□□□□ 0.94
VPS72-201ENST00000354473 MAFAQ8NHW3 353 aaPredicted RBP20.93■□□□□ 0.94
VPS72-201ENST00000354473 RC3H2Q9HBD1 1191 aaKnown RBP20.93■□□□□ 0.94
VPS72-201ENST00000354473 DDX19AQ9NUU7 478 aaKnown RBP20.93■□□□□ 0.94
VPS72-201ENST00000354473 KIAA1024Q9UPX6 916 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms