RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 THEMISQ8N1K5 641 aaPredicted RBP2.02□□□□□ -2.09
BRCA1-202ENST00000354071 DAGLBQ8NCG7 672 aa2.02□□□□□ -2.09
BRCA1-202ENST00000354071 TTC17Q96AE7 1141 aa2.02□□□□□ -2.09
BRCA1-202ENST00000354071 MFSD14AQ96MC6 490 aa2.02□□□□□ -2.09
BRCA1-202ENST00000354071 TBC1D32Q96NH3 1257 aa2.02□□□□□ -2.09
BRCA1-202ENST00000354071 JMJD8Q96S16 334 aa2.02□□□□□ -2.09
BRCA1-202ENST00000354071 C22orf23Q9BZE7 217 aa2.02□□□□□ -2.09
BRCA1-202ENST00000354071 WDR12Q9GZL7 423 aaKnown RBP2.02□□□□□ -2.09
BRCA1-202ENST00000354071 GRHPRQ9UBQ7 328 aa2.02□□□□□ -2.09
BRCA1-202ENST00000354071 EVLQ9UI08 416 aaPredicted RBP2.02□□□□□ -2.09
BRCA1-202ENST00000354071 L1RE1Q9UN81 338 aa2.02□□□□□ -2.09
BRCA1-202ENST00000354071 PLAGL2Q9UPG8 496 aa2.02□□□□□ -2.09
BRCA1-202ENST00000354071 PCDHB1Q9Y5F3 818 aa2.02□□□□□ -2.09
BRCA1-202ENST00000354071 SLC4A7Q9Y6M7 1214 aa2.02□□□□□ -2.09
BRCA1-202ENST00000354071 DGKBQ9Y6T7 804 aa2.02□□□□□ -2.09
BRCA1-202ENST00000354071 VWDEQ8N2E2 1590 aa2.02□□□□□ -2.09
BRCA1-202ENST00000354071 DYRK3O43781 588 aa2.02□□□□□ -2.09
BRCA1-202ENST00000354071 PCDH8O95206 1070 aa2.02□□□□□ -2.09
BRCA1-202ENST00000354071 PTPN1P18031 435 aaKnown RBP2.02□□□□□ -2.09
BRCA1-202ENST00000354071 PPM1AP35813 382 aa2.02□□□□□ -2.09
BRCA1-202ENST00000354071 MAPK9P45984 424 aa2.02□□□□□ -2.09
BRCA1-202ENST00000354071 OCRLQ01968 901 aa2.02□□□□□ -2.09
BRCA1-202ENST00000354071 TAF5Q15542 800 aa2.02□□□□□ -2.09
BRCA1-202ENST00000354071 ZNF174Q15697 407 aa2.02□□□□□ -2.09
BRCA1-202ENST00000354071 PRR23CQ6ZRP0 262 aa2.02□□□□□ -2.09
BRCA1-202ENST00000354071 BEND4Q6ZU67 534 aa2.02□□□□□ -2.09
BRCA1-202ENST00000354071 CBLL1Q75N03 491 aa2.02□□□□□ -2.09
BRCA1-202ENST00000354071 DENND1CQ8IV53 801 aa2.02□□□□□ -2.09
BRCA1-202ENST00000354071 PRR18Q8N4B5 295 aa2.02□□□□□ -2.09
BRCA1-202ENST00000354071 OXR1Q8N573 874 aa2.02□□□□□ -2.09
BRCA1-202ENST00000354071 SH2D3CQ8N5H7 860 aa2.02□□□□□ -2.09
BRCA1-202ENST00000354071 NAT16Q8N8M0 369 aa2.02□□□□□ -2.09
BRCA1-202ENST00000354071 ZSCAN18Q8TBC5 510 aaPredicted RBP2.02□□□□□ -2.09
BRCA1-202ENST00000354071 FOXRED1Q96CU9 486 aaPredicted RBP2.02□□□□□ -2.09
BRCA1-202ENST00000354071 MMP19Q99542 508 aa2.02□□□□□ -2.09
BRCA1-202ENST00000354071 CSRNP2Q9H175 543 aa2.02□□□□□ -2.09
BRCA1-202ENST00000354071 ITM2CQ9NQX7 267 aa2.02□□□□□ -2.09
BRCA1-202ENST00000354071 RIC8BQ9NVN3 520 aa2.02□□□□□ -2.09
BRCA1-202ENST00000354071 UCKL1Q9NWZ5 548 aa2.02□□□□□ -2.09
BRCA1-202ENST00000354071 DSEQ9UL01 958 aa2.02□□□□□ -2.09
BRCA1-202ENST00000354071 ZNF652Q9Y2D9 606 aa2.02□□□□□ -2.09
BRCA1-202ENST00000354071 PRAMEF25A6NGN4 478 aa2.01□□□□□ -2.09
BRCA1-202ENST00000354071 M0R3H8 397 aa2.01□□□□□ -2.09
BRCA1-202ENST00000354071 LDHCP07864 332 aa2.01□□□□□ -2.09
BRCA1-202ENST00000354071 ZNF865P0CJ78 1059 aaPredicted RBP2.01□□□□□ -2.09
BRCA1-202ENST00000354071 VEGFAP15692 232 aaPredicted RBP2.01□□□□□ -2.09
BRCA1-202ENST00000354071 LSP1P33241 339 aa2.01□□□□□ -2.09
BRCA1-202ENST00000354071 GPR19Q15760 415 aa2.01□□□□□ -2.09
BRCA1-202ENST00000354071 FAM209BQ5JX69 171 aa2.01□□□□□ -2.09
BRCA1-202ENST00000354071 CIAPIN1Q6FI81 312 aa2.01□□□□□ -2.09
BRCA1-202ENST00000354071 WAPLQ7Z5K2 1190 aa2.01□□□□□ -2.09
BRCA1-202ENST00000354071 TSPYL5Q86VY4 417 aaPredicted RBP2.01□□□□□ -2.09
BRCA1-202ENST00000354071 PLD6Q8N2A8 252 aaKnown RBP2.01□□□□□ -2.09
BRCA1-202ENST00000354071 BEND7Q8N7W2 519 aaPredicted RBP2.01□□□□□ -2.09
BRCA1-202ENST00000354071 PPIL4Q8WUA2 492 aaKnown RBP eCLIP2.01□□□□□ -2.09
BRCA1-202ENST00000354071 NRG4Q8WWG1 115 aa2.01□□□□□ -2.09
BRCA1-202ENST00000354071 ATXN2LQ8WWM7 1075 aaKnown RBP2.01□□□□□ -2.09
BRCA1-202ENST00000354071 ASCC2Q9H1I8 757 aaPredicted RBP2.01□□□□□ -2.09
BRCA1-202ENST00000354071 CERS4Q9HA82 394 aa2.01□□□□□ -2.09
BRCA1-202ENST00000354071 STK32BQ9NY57 414 aa2.01□□□□□ -2.09
BRCA1-202ENST00000354071 NOL12Q9UGY1 213 aaKnown RBP eCLIP2.01□□□□□ -2.09
BRCA1-202ENST00000354071 CFAP69A5D8W1 941 aa2.01□□□□□ -2.09
BRCA1-202ENST00000354071 RASA4BC9J798 803 aa2.01□□□□□ -2.09
BRCA1-202ENST00000354071 RASA4O43374 803 aa2.01□□□□□ -2.09
BRCA1-202ENST00000354071 GDF11O95390 407 aa2.01□□□□□ -2.09
BRCA1-202ENST00000354071 H2AFB1P0C5Y9 115 aa2.01□□□□□ -2.09
BRCA1-202ENST00000354071 H2AFB2P0C5Z0 115 aa2.01□□□□□ -2.09
BRCA1-202ENST00000354071 KITP10721 976 aa2.01□□□□□ -2.09
BRCA1-202ENST00000354071 LTKP29376 864 aa2.01□□□□□ -2.09
BRCA1-202ENST00000354071 MAP2K6P52564 334 aa2.01□□□□□ -2.09
BRCA1-202ENST00000354071 RAC1P63000 192 aa2.01□□□□□ -2.09
BRCA1-202ENST00000354071 GAB4Q2WGN9 574 aa2.01□□□□□ -2.09
BRCA1-202ENST00000354071 HABP4Q5JVS0 413 aaKnown RBP2.01□□□□□ -2.09
BRCA1-202ENST00000354071 GJC2Q5T442 439 aaPredicted RBP2.01□□□□□ -2.09
BRCA1-202ENST00000354071 RNF220Q5VTB9 566 aa2.01□□□□□ -2.09
BRCA1-202ENST00000354071 CILP2Q8IUL8 1156 aa2.01□□□□□ -2.09
BRCA1-202ENST00000354071 KIAA0319LQ8IZA0 1049 aa2.01□□□□□ -2.09
BRCA1-202ENST00000354071 ARRDC4Q8NCT1 418 aa2.01□□□□□ -2.09
BRCA1-202ENST00000354071 ASB15Q8WXK1 588 aa2.01□□□□□ -2.09
BRCA1-202ENST00000354071 DLG3Q92796 817 aa2.01□□□□□ -2.09
BRCA1-202ENST00000354071 NAP1L4Q99733 375 aaKnown RBP2.01□□□□□ -2.09
BRCA1-202ENST00000354071 PLCD4Q9BRC7 762 aa2.01□□□□□ -2.09
BRCA1-202ENST00000354071 ITGB1BP2Q9UKP3 347 aa2.01□□□□□ -2.09
BRCA1-202ENST00000354071 EYA2O00167 538 aa2.01□□□□□ -2.09
BRCA1-202ENST00000354071 BUB1BO60566 1050 aaPredicted RBP2.01□□□□□ -2.09
BRCA1-202ENST00000354071 ESR1P03372 595 aa2.01□□□□□ -2.09
BRCA1-202ENST00000354071 C4BPAP04003 597 aaKnown RBP2.01□□□□□ -2.09
BRCA1-202ENST00000354071 SPINK2P20155 84 aa2.01□□□□□ -2.09
BRCA1-202ENST00000354071 PDIA3P30101 505 aaKnown RBP2.01□□□□□ -2.09
BRCA1-202ENST00000354071 MAPK10P53779 464 aa2.01□□□□□ -2.09
BRCA1-202ENST00000354071 GEMIN4P57678 1058 aaKnown RBP2.01□□□□□ -2.09
BRCA1-202ENST00000354071 RPL11P62913 178 aaKnown RBP2.01□□□□□ -2.09
BRCA1-202ENST00000354071 KRT85P78386 507 aa2.01□□□□□ -2.09
BRCA1-202ENST00000354071 DUSP4Q13115 394 aa2.01□□□□□ -2.09
BRCA1-202ENST00000354071 UGT8Q16880 541 aa2.01□□□□□ -2.09
BRCA1-202ENST00000354071 LIN54Q6MZP7 749 aa2.01□□□□□ -2.09
BRCA1-202ENST00000354071 HIBCHQ6NVY1 386 aaPredicted RBP2.01□□□□□ -2.09
BRCA1-202ENST00000354071 LRSAM1Q6UWE0 723 aa2.01□□□□□ -2.09
BRCA1-202ENST00000354071 FAM20CQ8IXL6 584 aa2.01□□□□□ -2.09
BRCA1-202ENST00000354071 FAM43AQ8N2R8 423 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms