RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 DNAJC10Q8IXB1 793 aa8.24□□□□□ -1.09
BRCA1-201ENST00000352993 VGLL2Q8N8G2 317 aa8.24□□□□□ -1.09
BRCA1-201ENST00000352993 CTNNBL1Q8WYA6 563 aaPredicted RBP8.24□□□□□ -1.09
BRCA1-201ENST00000352993 PITPNM3Q9BZ71 974 aa8.24□□□□□ -1.09
BRCA1-201ENST00000352993 RNPEPL1Q9HAU8 725 aa8.24□□□□□ -1.09
BRCA1-201ENST00000352993 ARMCX3Q9UH62 379 aaPredicted RBP8.24□□□□□ -1.09
BRCA1-201ENST00000352993 SMCO2A6NFE2 343 aa8.24□□□□□ -1.09
BRCA1-201ENST00000352993 CETN3O15182 167 aa8.24□□□□□ -1.09
BRCA1-201ENST00000352993 CALB2P22676 271 aa8.24□□□□□ -1.09
BRCA1-201ENST00000352993 CALCOCO2Q13137 446 aa8.24□□□□□ -1.09
BRCA1-201ENST00000352993 TNIP1Q15025 636 aa8.24□□□□□ -1.09
BRCA1-201ENST00000352993 CALCRLQ16602 461 aa8.24□□□□□ -1.09
BRCA1-201ENST00000352993 C10orf76Q5T2E6 689 aa8.24□□□□□ -1.09
BRCA1-201ENST00000352993 SEPT14Q6ZU15 432 aa8.24□□□□□ -1.09
BRCA1-201ENST00000352993 ARHGAP22Q7Z5H3 698 aa8.24□□□□□ -1.09
BRCA1-201ENST00000352993 NEK8Q86SG6 692 aa8.24□□□□□ -1.09
BRCA1-201ENST00000352993 C18orf8Q96DM3 657 aa8.24□□□□□ -1.09
BRCA1-201ENST00000352993 EPAS1Q99814 870 aa8.24□□□□□ -1.09
BRCA1-201ENST00000352993 MKNK2Q9HBH9 465 aa8.24□□□□□ -1.09
BRCA1-201ENST00000352993 MROH5Q6ZUA9 1318 aa8.24□□□□□ -1.09
BRCA1-201ENST00000352993 CES2O00748 559 aa8.23□□□□□ -1.09
BRCA1-201ENST00000352993 PDE8AO60658 829 aa8.23□□□□□ -1.09
BRCA1-201ENST00000352993 CNGA1P29973 690 aa8.23□□□□□ -1.09
BRCA1-201ENST00000352993 GYG1P46976 350 aa8.23□□□□□ -1.09
BRCA1-201ENST00000352993 ZRSR2Q15696 482 aaKnown RBP8.23□□□□□ -1.09
BRCA1-201ENST00000352993 AADACL2Q6P093 401 aa8.23□□□□□ -1.09
BRCA1-201ENST00000352993 EXOC3L1Q86VI1 746 aa8.23□□□□□ -1.09
BRCA1-201ENST00000352993 NLRP10Q86W26 655 aa8.23□□□□□ -1.09
BRCA1-201ENST00000352993 TBCKQ8TEA7 893 aa8.23□□□□□ -1.09
BRCA1-201ENST00000352993 STK32AQ8WU08 396 aa8.23□□□□□ -1.09
BRCA1-201ENST00000352993 RAB34Q9BZG1 259 aa8.23□□□□□ -1.09
BRCA1-201ENST00000352993 ERVK-5Q9HDB9 667 aa8.23□□□□□ -1.09
BRCA1-201ENST00000352993 FLT1P17948 1338 aa8.23□□□□□ -1.09
BRCA1-201ENST00000352993 PVALEFA0A1B0GWK0 134 aa8.23□□□□□ -1.09
BRCA1-201ENST00000352993 GSTTP1A0A1W2PQM5 241 aa8.23□□□□□ -1.09
BRCA1-201ENST00000352993 MAP3K13O43283 966 aa8.23□□□□□ -1.09
BRCA1-201ENST00000352993 ENTPD5O75356 428 aa8.23□□□□□ -1.09
BRCA1-201ENST00000352993 NUDT17P0C025 328 aa8.23□□□□□ -1.09
BRCA1-201ENST00000352993 GCLCP48506 637 aaPredicted RBP8.23□□□□□ -1.09
BRCA1-201ENST00000352993 PEX5P50542 639 aa8.23□□□□□ -1.09
BRCA1-201ENST00000352993 GALCP54803 685 aa8.23□□□□□ -1.09
BRCA1-201ENST00000352993 AUHQ13825 339 aaKnown RBP8.23□□□□□ -1.09
BRCA1-201ENST00000352993 EXOC3L4Q17RC7 722 aa8.23□□□□□ -1.09
BRCA1-201ENST00000352993 SRRM1Q8IYB3 904 aaKnown RBP8.23□□□□□ -1.09
BRCA1-201ENST00000352993 GALNT15Q8N3T1 639 aa8.23□□□□□ -1.09
BRCA1-201ENST00000352993 TTC8Q8TAM2 541 aa8.23□□□□□ -1.09
BRCA1-201ENST00000352993 MOV10L1Q9BXT6 1211 aaKnown RBP8.23□□□□□ -1.09
BRCA1-201ENST00000352993 C6orf50Q9HD87 102 aa8.23□□□□□ -1.09
BRCA1-201ENST00000352993 KCNMB3Q9NPA1 279 aa8.23□□□□□ -1.09
BRCA1-201ENST00000352993 SUCLA2Q9P2R7 463 aaPredicted RBP8.23□□□□□ -1.09
BRCA1-201ENST00000352993 NFAT5O94916 1531 aa8.23□□□□□ -1.09
BRCA1-201ENST00000352993 CHD4Q14839 1912 aa8.23□□□□□ -1.09
BRCA1-201ENST00000352993 GH1P01241 217 aa8.23□□□□□ -1.09
BRCA1-201ENST00000352993 ATP6V1C1P21283 382 aa8.23□□□□□ -1.09
BRCA1-201ENST00000352993 NR2F2P24468 414 aa8.23□□□□□ -1.09
BRCA1-201ENST00000352993 PTDSS1P48651 473 aaKnown RBP8.23□□□□□ -1.09
BRCA1-201ENST00000352993 GRB10Q13322 594 aa8.23□□□□□ -1.09
BRCA1-201ENST00000352993 KRT25Q7Z3Z0 450 aa8.23□□□□□ -1.09
BRCA1-201ENST00000352993 APBB1IPQ7Z5R6 666 aaPredicted RBP8.23□□□□□ -1.09
BRCA1-201ENST00000352993 NT5DC3Q86UY8 548 aa8.23□□□□□ -1.09
BRCA1-201ENST00000352993 LRRC57Q8N9N7 239 aa8.23□□□□□ -1.09
BRCA1-201ENST00000352993 LRRC8CQ8TDW0 803 aa8.23□□□□□ -1.09
BRCA1-201ENST00000352993 ATP8B4Q8TF62 1192 aa8.23□□□□□ -1.09
BRCA1-201ENST00000352993 GORASP1Q9BQQ3 440 aa8.23□□□□□ -1.09
BRCA1-201ENST00000352993 MCM9Q9NXL9 1143 aa8.23□□□□□ -1.09
BRCA1-201ENST00000352993 AIPL1Q9NZN9 384 aa8.23□□□□□ -1.09
BRCA1-201ENST00000352993 CTNNAL1Q9UBT7 734 aa8.23□□□□□ -1.09
BRCA1-201ENST00000352993 HDAC9Q9UKV0 1011 aa8.23□□□□□ -1.09
BRCA1-201ENST00000352993 INTUQ9ULD6 942 aa8.23□□□□□ -1.09
BRCA1-201ENST00000352993 PPP1R9AQ9ULJ8 1098 aa8.23□□□□□ -1.09
BRCA1-201ENST00000352993 JAG2Q9Y219 1238 aa8.23□□□□□ -1.09
BRCA1-201ENST00000352993 NVLO15381 856 aaKnown RBP8.22□□□□□ -1.09
BRCA1-201ENST00000352993 UCHL3P15374 230 aa8.22□□□□□ -1.09
BRCA1-201ENST00000352993 SP100P23497 879 aaPredicted RBP8.22□□□□□ -1.09
BRCA1-201ENST00000352993 EPHB2P29323 1055 aa8.22□□□□□ -1.09
BRCA1-201ENST00000352993 SERPINB4P48594 390 aa8.22□□□□□ -1.09
BRCA1-201ENST00000352993 VPS41P49754 854 aa8.22□□□□□ -1.09
BRCA1-201ENST00000352993 COASYQ13057 564 aa8.22□□□□□ -1.09
BRCA1-201ENST00000352993 GJB7Q6PEY0 223 aa8.22□□□□□ -1.09
BRCA1-201ENST00000352993 BICDL1Q6ZP65 573 aa8.22□□□□□ -1.09
BRCA1-201ENST00000352993 UCMAQ8WVF2 138 aa8.22□□□□□ -1.09
BRCA1-201ENST00000352993 MRRFQ96E11 262 aaKnown RBP8.22□□□□□ -1.09
BRCA1-201ENST00000352993 LRRC37BQ96QE4 947 aa8.22□□□□□ -1.09
BRCA1-201ENST00000352993 METTL5Q9NRN9 209 aaKnown RBP8.22□□□□□ -1.09
BRCA1-201ENST00000352993 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.22□□□□□ -1.094e-6■■■■■ 27.4
BRCA1-201ENST00000352993 ANKIB1Q9P2G1 1089 aa8.22□□□□□ -1.09
BRCA1-201ENST00000352993 SEC63Q9UGP8 760 aaKnown RBP8.22□□□□□ -1.09
BRCA1-201ENST00000352993 BZW2Q9Y6E2 419 aaKnown RBP8.22□□□□□ -1.09
BRCA1-201ENST00000352993 AKAP11Q9UKA4 1901 aa8.22□□□□□ -1.09
BRCA1-201ENST00000352993 RNF8O76064 485 aa8.22□□□□□ -1.09
BRCA1-201ENST00000352993 UNC5CO95185 931 aa8.22□□□□□ -1.09
BRCA1-201ENST00000352993 KCNA3P22001 575 aa8.22□□□□□ -1.09
BRCA1-201ENST00000352993 ATP5DP30049 168 aa8.22□□□□□ -1.09
BRCA1-201ENST00000352993 RPL21P46778 160 aaKnown RBP8.22□□□□□ -1.09
BRCA1-201ENST00000352993 KCNJ1P48048 391 aa8.22□□□□□ -1.09
BRCA1-201ENST00000352993 GNAQP50148 359 aa8.22□□□□□ -1.09
BRCA1-201ENST00000352993 ERFP50548 548 aa8.22□□□□□ -1.09
BRCA1-201ENST00000352993 PTENP60484 403 aa8.22□□□□□ -1.09
BRCA1-201ENST00000352993 GALNTL6Q49A17 601 aa8.22□□□□□ -1.09
BRCA1-201ENST00000352993 DUPD1Q68J44 220 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms