RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 PCDHA6Q9UN73 950 aa9.22□□□□□ -0.93
CD44-205ENST00000352818 SORCS3Q9UPU3 1222 aa9.22□□□□□ -0.93
CD44-205ENST00000352818 PCDHA8Q9Y5H6 950 aa9.22□□□□□ -0.93
CD44-205ENST00000352818 TRIP12Q14669 1992 aaPredicted RBP9.21□□□□□ -0.93
CD44-205ENST00000352818 MICAL3Q7RTP6 2002 aa9.21□□□□□ -0.93
CD44-205ENST00000352818 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.21□□□□□ -0.94
CD44-205ENST00000352818 WNT7AO00755 349 aa9.21□□□□□ -0.94
CD44-205ENST00000352818 POLR2DO15514 142 aaKnown RBP9.21□□□□□ -0.94
CD44-205ENST00000352818 AMHP03971 560 aa9.21□□□□□ -0.94
CD44-205ENST00000352818 RB1P06400 928 aa9.21□□□□□ -0.94
CD44-205ENST00000352818 SLFN14P0C7P3 912 aa9.21□□□□□ -0.94
CD44-205ENST00000352818 TPM4P67936 248 aa9.21□□□□□ -0.94
CD44-205ENST00000352818 ICA1Q05084 483 aa9.21□□□□□ -0.94
CD44-205ENST00000352818 PTGDRQ13258 359 aa9.21□□□□□ -0.94
CD44-205ENST00000352818 SEMA3FQ13275 785 aa9.21□□□□□ -0.94
CD44-205ENST00000352818 PNOCQ13519 176 aa9.21□□□□□ -0.94
CD44-205ENST00000352818 MTMR3Q13615 1198 aa9.21□□□□□ -0.94
CD44-205ENST00000352818 DHX8Q14562 1220 aaKnown RBP9.21□□□□□ -0.94
CD44-205ENST00000352818 ZNF174Q15697 407 aa9.21□□□□□ -0.94
CD44-205ENST00000352818 ZBTB33Q86T24 672 aa9.21□□□□□ -0.94
CD44-205ENST00000352818 CPXCR1Q8N123 301 aa9.21□□□□□ -0.94
CD44-205ENST00000352818 ATP8B4Q8TF62 1192 aa9.21□□□□□ -0.94
CD44-205ENST00000352818 DCAF4Q8WV16 495 aa9.21□□□□□ -0.94
CD44-205ENST00000352818 PURBQ96QR8 312 aaKnown RBP9.21□□□□□ -0.94
CD44-205ENST00000352818 TRIM5Q9C035 493 aa9.21□□□□□ -0.94
CD44-205ENST00000352818 RTN4Q9NQC3 1192 aaKnown RBP9.21□□□□□ -0.94
CD44-205ENST00000352818 IGSF5Q9NSI5 407 aa9.21□□□□□ -0.94
CD44-205ENST00000352818 DACH1Q9UI36 760 aa9.21□□□□□ -0.94
CD44-205ENST00000352818 BAZ2BQ9UIF8 2168 aaKnown RBP9.21□□□□□ -0.94
CD44-205ENST00000352818 CNOT1A5YKK6 2376 aaKnown RBP9.2□□□□□ -0.94
CD44-205ENST00000352818 SMC2O95347 1197 aa9.2□□□□□ -0.94
CD44-205ENST00000352818 ASGR2P07307 311 aa9.2□□□□□ -0.94
CD44-205ENST00000352818 GOLGA8HP0CJ92 632 aa9.2□□□□□ -0.94
CD44-205ENST00000352818 EEF2P13639 858 aaKnown RBP9.2□□□□□ -0.94
CD44-205ENST00000352818 ATP2B1P20020 1258 aa9.2□□□□□ -0.94
CD44-205ENST00000352818 NRIP1P48552 1158 aa9.2□□□□□ -0.94
CD44-205ENST00000352818 NAPAP54920 295 aa9.2□□□□□ -0.94
CD44-205ENST00000352818 MYL5Q02045 173 aa9.2□□□□□ -0.94
CD44-205ENST00000352818 MORC3Q14149 939 aa9.2□□□□□ -0.94
CD44-205ENST00000352818 NCAPHQ15003 741 aa9.2□□□□□ -0.94
CD44-205ENST00000352818 NONOQ15233 471 aaKnown RBP eCLIP9.2□□□□□ -0.94
CD44-205ENST00000352818 ZNF618Q5T7W0 954 aa9.2□□□□□ -0.94
CD44-205ENST00000352818 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.2□□□□□ -0.94
CD44-205ENST00000352818 TEX2Q8IWB9 1127 aa9.2□□□□□ -0.94
CD44-205ENST00000352818 MLKLQ8NB16 471 aa9.2□□□□□ -0.94
CD44-205ENST00000352818 FLCNQ8NFG4 579 aa9.2□□□□□ -0.94
CD44-205ENST00000352818 MORC4Q8TE76 937 aa9.2□□□□□ -0.94
CD44-205ENST00000352818 PIBF1Q8WXW3 757 aa9.2□□□□□ -0.94
CD44-205ENST00000352818 RIN2Q8WYP3 895 aaPredicted RBP9.2□□□□□ -0.94
CD44-205ENST00000352818 ERCC4Q92889 916 aaPredicted RBP9.2□□□□□ -0.94
CD44-205ENST00000352818 CLP1Q92989 425 aaKnown RBP9.2□□□□□ -0.94
CD44-205ENST00000352818 SMARCE1Q969G3 411 aa9.2□□□□□ -0.94
CD44-205ENST00000352818 SLF1Q9BQI6 1058 aa9.2□□□□□ -0.94
CD44-205ENST00000352818 C11orf84Q9BUA3 381 aaPredicted RBP9.2□□□□□ -0.94
CD44-205ENST00000352818 GLT8D2Q9H1C3 349 aa9.2□□□□□ -0.94
CD44-205ENST00000352818 KANSL2Q9H9L4 492 aa9.2□□□□□ -0.94
CD44-205ENST00000352818 RC3H2Q9HBD1 1191 aaKnown RBP9.2□□□□□ -0.94
CD44-205ENST00000352818 A1CFQ9NQ94 594 aaKnown RBP9.2□□□□□ -0.94
CD44-205ENST00000352818 SERTAD1Q9UHV2 236 aa9.2□□□□□ -0.94
CD44-205ENST00000352818 MAN1B1Q9UKM7 699 aa9.2□□□□□ -0.94
CD44-205ENST00000352818 PLAGL2Q9UPG8 496 aa9.2□□□□□ -0.94
CD44-205ENST00000352818 NOD1Q9Y239 953 aa9.2□□□□□ -0.94
CD44-205ENST00000352818 PCDHA5Q9Y5H7 936 aa9.2□□□□□ -0.94
CD44-205ENST00000352818 ITPR1Q14643 2758 aa9.2□□□□□ -0.94
CD44-205ENST00000352818 PNMA6FA0A0J9YX94 578 aa9.19□□□□□ -0.94
CD44-205ENST00000352818 VWA3AA6NCI4 1184 aa9.19□□□□□ -0.94
CD44-205ENST00000352818 A6NJR5 290 aa9.19□□□□□ -0.94
CD44-205ENST00000352818 C2CD4DB7Z1M9 353 aa9.19□□□□□ -0.94
CD44-205ENST00000352818 ADAMTS3O15072 1205 aa9.19□□□□□ -0.94
CD44-205ENST00000352818 NEMFO60524 1076 aa9.19□□□□□ -0.94
CD44-205ENST00000352818 UPP2O95045 317 aa9.19□□□□□ -0.94
CD44-205ENST00000352818 PARNO95453 639 aaKnown RBP9.19□□□□□ -0.94
CD44-205ENST00000352818 PMLP29590 882 aa9.19□□□□□ -0.94
CD44-205ENST00000352818 MCM7P33993 719 aa9.19□□□□□ -0.94
CD44-205ENST00000352818 TXLNAP40222 546 aa9.19□□□□□ -0.94
CD44-205ENST00000352818 PLCB2Q00722 1185 aa9.19□□□□□ -0.94
CD44-205ENST00000352818 HIC1Q14526 733 aa9.19□□□□□ -0.94
CD44-205ENST00000352818 E2F4Q16254 413 aa9.19□□□□□ -0.94
CD44-205ENST00000352818 PPM1JQ5JR12 505 aa9.19□□□□□ -0.94
CD44-205ENST00000352818 SPECC1Q5M775 1068 aa9.19□□□□□ -0.94
CD44-205ENST00000352818 RASGRP2Q7LDG7 609 aa9.19□□□□□ -0.94
CD44-205ENST00000352818 RBM23Q86U06 439 aaKnown RBP9.19□□□□□ -0.94
CD44-205ENST00000352818 SESTD1Q86VW0 696 aa9.19□□□□□ -0.94
CD44-205ENST00000352818 LRRC47Q8N1G4 583 aaKnown RBP9.19□□□□□ -0.94
CD44-205ENST00000352818 IQUBQ8NA54 791 aa9.19□□□□□ -0.94
CD44-205ENST00000352818 GMCL1P1Q8NEA9 526 aa9.19□□□□□ -0.94
CD44-205ENST00000352818 CHST13Q8NET6 341 aa9.19□□□□□ -0.94
CD44-205ENST00000352818 KAT2BQ92831 832 aa9.19□□□□□ -0.94
CD44-205ENST00000352818 GSDMAQ96QA5 445 aa9.19□□□□□ -0.94
CD44-205ENST00000352818 PIGSQ96S52 555 aa9.19□□□□□ -0.94
CD44-205ENST00000352818 RTKNQ9BST9 563 aa9.19□□□□□ -0.94
CD44-205ENST00000352818 CCSER1Q9C0I3 900 aa9.19□□□□□ -0.94
CD44-205ENST00000352818 MAGEF1Q9HAY2 307 aa9.19□□□□□ -0.94
CD44-205ENST00000352818 SLC38A10Q9HBR0 1119 aa9.19□□□□□ -0.94
CD44-205ENST00000352818 ARHGEF10LQ9HCE6 1279 aa9.19□□□□□ -0.94
CD44-205ENST00000352818 SPTLC3Q9NUV7 552 aa9.19□□□□□ -0.94
CD44-205ENST00000352818 IMPACTQ9P2X3 320 aa9.19□□□□□ -0.94
CD44-205ENST00000352818 CLIP2Q9UDT6 1046 aa9.19□□□□□ -0.94
CD44-205ENST00000352818 A0A087X0B3 334 aa9.18□□□□□ -0.94
CD44-205ENST00000352818 RBM47A0AV96 593 aaKnown RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms