RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 MAP3K10Q02779 954 aa24.11■■□□□ 1.45
UPF3A-201ENST00000351487 NIPA1Q7RTP0 329 aa24.11■■□□□ 1.45
UPF3A-201ENST00000351487 LMBR1Q8WVP7 490 aa24.11■■□□□ 1.45
UPF3A-201ENST00000351487 ZFP91Q96JP5 570 aaPredicted RBP24.11■■□□□ 1.45
UPF3A-201ENST00000351487 SYT11Q9BT88 431 aa24.11■■□□□ 1.45
UPF3A-201ENST00000351487 EPB41L5Q9HCM4 733 aa24.11■■□□□ 1.45
UPF3A-201ENST00000351487 PGAP2Q9UHJ9 254 aa24.11■■□□□ 1.45
UPF3A-201ENST00000351487 ZNF536O15090 1300 aa24.1■■□□□ 1.45
UPF3A-201ENST00000351487 GOLGA6CA6NDK9 693 aa24.1■■□□□ 1.45
UPF3A-201ENST00000351487 GOLGA8KD6RF30 607 aa24.1■■□□□ 1.45
UPF3A-201ENST00000351487 HIP1RO75146 1068 aa24.1■■□□□ 1.45
UPF3A-201ENST00000351487 ASNSP08243 561 aa24.1■■□□□ 1.45
UPF3A-201ENST00000351487 GOLGA6DP0CG33 693 aa24.1■■□□□ 1.45
UPF3A-201ENST00000351487 CARSP49589 748 aaKnown RBP24.1■■□□□ 1.45
UPF3A-201ENST00000351487 GHRHRQ02643 423 aa24.1■■□□□ 1.45
UPF3A-201ENST00000351487 CBWD6Q4V339 395 aa24.1■■□□□ 1.45
UPF3A-201ENST00000351487 CBWD3Q5JTY5 395 aa24.1■■□□□ 1.45
UPF3A-201ENST00000351487 CBWD5Q5RIA9 395 aa24.1■■□□□ 1.45
UPF3A-201ENST00000351487 LARGE2Q8N3Y3 721 aa24.1■■□□□ 1.45
UPF3A-201ENST00000351487 MREGQ8N565 214 aa24.1■■□□□ 1.45
UPF3A-201ENST00000351487 BANK1Q8NDB2 785 aa24.1■■□□□ 1.45
UPF3A-201ENST00000351487 FAM76AQ8TAV0 307 aa24.1■■□□□ 1.45
UPF3A-201ENST00000351487 LNX1Q8TBB1 728 aaPredicted RBP24.1■■□□□ 1.45
UPF3A-201ENST00000351487 CALR3Q96L12 384 aaKnown RBP24.1■■□□□ 1.45
UPF3A-201ENST00000351487 GOLGA6AQ9NYA3 693 aa24.1■■□□□ 1.45
UPF3A-201ENST00000351487 OPA1O60313 960 aa24.1■■□□□ 1.45
UPF3A-201ENST00000351487 CYP2J2P51589 502 aa24.1■■□□□ 1.45
UPF3A-201ENST00000351487 GUCY2DQ02846 1103 aa24.1■■□□□ 1.45
UPF3A-201ENST00000351487 MIGA2Q7L4E1 593 aa24.1■■□□□ 1.45
UPF3A-201ENST00000351487 SYCE1Q8N0S2 351 aa24.1■■□□□ 1.45
UPF3A-201ENST00000351487 TTLL6Q8N841 843 aa24.1■■□□□ 1.45
UPF3A-201ENST00000351487 SCFD2Q8WU76 684 aa24.1■■□□□ 1.45
UPF3A-201ENST00000351487 TMEM174Q8WUU8 243 aa24.1■■□□□ 1.45
UPF3A-201ENST00000351487 STXBP5LQ9Y2K9 1186 aa24.1■■□□□ 1.45
UPF3A-201ENST00000351487 ZBTB12Q9Y330 459 aaPredicted RBP24.1■■□□□ 1.45
UPF3A-201ENST00000351487 NCANO14594 1321 aa24.09■■□□□ 1.45
UPF3A-201ENST00000351487 LMNB1P20700 586 aa24.09■■□□□ 1.45
UPF3A-201ENST00000351487 DRAP1Q14919 205 aaPredicted RBP24.09■■□□□ 1.45
UPF3A-201ENST00000351487 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.09■■□□□ 1.45
UPF3A-201ENST00000351487 EIF1ADQ8N9N8 165 aaKnown RBP24.09■■□□□ 1.45
UPF3A-201ENST00000351487 GPR88Q9GZN0 384 aa24.09■■□□□ 1.45
UPF3A-201ENST00000351487 SUCLA2Q9P2R7 463 aaPredicted RBP24.09■■□□□ 1.45
UPF3A-201ENST00000351487 APEX2Q9UBZ4 518 aa24.09■■□□□ 1.45
UPF3A-201ENST00000351487 DNAJC12Q9UKB3 198 aa24.09■■□□□ 1.45
UPF3A-201ENST00000351487 CCPG1Q9ULG6 757 aa24.09■■□□□ 1.45
UPF3A-201ENST00000351487 ZSCAN5CA6NGD5 496 aaPredicted RBP24.08■■□□□ 1.45
UPF3A-201ENST00000351487 SHOX2O60902 331 aaPredicted RBP24.08■■□□□ 1.45
UPF3A-201ENST00000351487 MAPTP10636 758 aaKnown RBP24.08■■□□□ 1.45
UPF3A-201ENST00000351487 RFX1P22670 979 aa24.08■■□□□ 1.45
UPF3A-201ENST00000351487 BFSP1Q12934 665 aa24.08■■□□□ 1.45
UPF3A-201ENST00000351487 PPFIA1Q13136 1202 aa24.08■■□□□ 1.45
UPF3A-201ENST00000351487 DNAAF5Q86Y56 855 aa24.08■■□□□ 1.45
UPF3A-201ENST00000351487 U2AF1L4Q8WU68 220 aaKnown RBP24.08■■□□□ 1.45
UPF3A-201ENST00000351487 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP24.08■■□□□ 1.451e-6■■□□□ 11.4
UPF3A-201ENST00000351487 INTS2Q9H0H0 1204 aaKnown RBP24.08■■□□□ 1.45
UPF3A-201ENST00000351487 GOLPH3Q9H4A6 298 aa24.08■■□□□ 1.45
UPF3A-201ENST00000351487 NFU1Q9UMS0 254 aa24.08■■□□□ 1.45
UPF3A-201ENST00000351487 HSF2BPO75031 334 aa24.08■■□□□ 1.45
UPF3A-201ENST00000351487 MYL7Q01449 175 aa24.08■■□□□ 1.45
UPF3A-201ENST00000351487 ALCAMQ13740 583 aa24.08■■□□□ 1.45
UPF3A-201ENST00000351487 PADI6Q6TGC4 694 aa24.08■■□□□ 1.45
UPF3A-201ENST00000351487 AGBL1Q96MI9 1066 aa24.08■■□□□ 1.45
UPF3A-201ENST00000351487 KCNH7Q9NS40 1196 aa24.08■■□□□ 1.45
UPF3A-201ENST00000351487 COL20A1Q9P218 1284 aa24.08■■□□□ 1.45
UPF3A-201ENST00000351487 RAD51CO43502 376 aa24.07■■□□□ 1.44
UPF3A-201ENST00000351487 TRIM49P0CI25 452 aa24.07■■□□□ 1.44
UPF3A-201ENST00000351487 TRIM49CP0CI26 452 aa24.07■■□□□ 1.44
UPF3A-201ENST00000351487 LRRC31Q6UY01 552 aa24.07■■□□□ 1.44
UPF3A-201ENST00000351487 MIER3Q7Z3K6 550 aa24.07■■□□□ 1.44
UPF3A-201ENST00000351487 AGBL3Q8NEM8 1001 aa24.07■■□□□ 1.44
UPF3A-201ENST00000351487 CASKIN2Q8WXE0 1202 aa24.07■■□□□ 1.44
UPF3A-201ENST00000351487 ZBED3Q96IU2 234 aaPredicted RBP24.07■■□□□ 1.44
UPF3A-201ENST00000351487 DBR1Q9UK59 544 aaKnown RBP24.07■■□□□ 1.44
UPF3A-201ENST00000351487 PGRMC1O00264 195 aaKnown RBP24.07■■□□□ 1.44
UPF3A-201ENST00000351487 DHX15O43143 795 aaKnown RBP24.07■■□□□ 1.44
UPF3A-201ENST00000351487 P4HBP07237 508 aaKnown RBP24.07■■□□□ 1.44
UPF3A-201ENST00000351487 CCDC172P0C7W6 258 aa24.07■■□□□ 1.44
UPF3A-201ENST00000351487 GALCP54803 685 aa24.07■■□□□ 1.44
UPF3A-201ENST00000351487 PEX26Q7Z412 305 aa24.07■■□□□ 1.44
UPF3A-201ENST00000351487 RASGEF1CQ8N431 466 aa24.07■■□□□ 1.44
UPF3A-201ENST00000351487 METTL13Q8N6R0 699 aa24.07■■□□□ 1.44
UPF3A-201ENST00000351487 WHAMMQ8TF30 809 aa24.07■■□□□ 1.44
UPF3A-201ENST00000351487 CLEC4DQ8WXI8 215 aa24.07■■□□□ 1.44
UPF3A-201ENST00000351487 ZNF277Q9NRM2 450 aaPredicted RBP24.07■■□□□ 1.44
UPF3A-201ENST00000351487 FER1L6Q2WGJ9 1857 aa24.07■■□□□ 1.44
UPF3A-201ENST00000351487 ESYT3A0FGR9 886 aa24.06■■□□□ 1.44
UPF3A-201ENST00000351487 EXOC3O60645 756 aa24.06■■□□□ 1.44
UPF3A-201ENST00000351487 INPP5BP32019 993 aa24.06■■□□□ 1.44
UPF3A-201ENST00000351487 RNASE9P60153 205 aaKnown RBP24.06■■□□□ 1.44
UPF3A-201ENST00000351487 SF3B2Q13435 895 aaKnown RBP24.06■■□□□ 1.44
UPF3A-201ENST00000351487 SAMD1Q6SPF0 538 aaPredicted RBP24.06■■□□□ 1.44
UPF3A-201ENST00000351487 NT5DC3Q86UY8 548 aa24.06■■□□□ 1.44
UPF3A-201ENST00000351487 SYCP3Q8IZU3 236 aa24.06■■□□□ 1.44
UPF3A-201ENST00000351487 VPS33BQ9H267 617 aa24.06■■□□□ 1.44
UPF3A-201ENST00000351487 LARSQ9P2J5 1176 aaKnown RBP24.06■■□□□ 1.44
UPF3A-201ENST00000351487 K7ENM7 598 aa24.06■■□□□ 1.44
UPF3A-201ENST00000351487 TULP2O00295 520 aa24.06■■□□□ 1.44
UPF3A-201ENST00000351487 CEP104O60308 925 aa24.06■■□□□ 1.44
UPF3A-201ENST00000351487 TMEM253P0C7T8 217 aa24.06■■□□□ 1.44
UPF3A-201ENST00000351487 TNIP1Q15025 636 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms