RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 RINT1Q6NUQ1 792 aa11.32□□□□□ -0.6
SMPD4-201ENST00000351288 TXLNBQ8N3L3 684 aa11.32□□□□□ -0.6
SMPD4-201ENST00000351288 CNKSR2Q8WXI2 1034 aa11.32□□□□□ -0.6
SMPD4-201ENST00000351288 FAM107BQ9H098 131 aa11.32□□□□□ -0.6
SMPD4-201ENST00000351288 CTTNBP2NLQ9P2B4 639 aa11.32□□□□□ -0.6
SMPD4-201ENST00000351288 DNAH12Q6ZR08 3092 aa11.31□□□□□ -0.6
SMPD4-201ENST00000351288 GOLGA6BA6NDN3 693 aa11.31□□□□□ -0.6
SMPD4-201ENST00000351288 VGLL3A8MV65 326 aa11.31□□□□□ -0.6
SMPD4-201ENST00000351288 VIL1P09327 827 aaKnown RBP11.31□□□□□ -0.6
SMPD4-201ENST00000351288 SRGAP2CP0DJJ0 459 aa11.31□□□□□ -0.6
SMPD4-201ENST00000351288 SLC12A3P55017 1021 aa11.31□□□□□ -0.6
SMPD4-201ENST00000351288 IQCEQ6IPM2 695 aa11.31□□□□□ -0.6
SMPD4-201ENST00000351288 DAAM2Q86T65 1068 aa11.31□□□□□ -0.6
SMPD4-201ENST00000351288 CDR2LQ86X02 465 aaPredicted RBP11.31□□□□□ -0.6
SMPD4-201ENST00000351288 GMCL1Q96IK5 515 aa11.31□□□□□ -0.6
SMPD4-201ENST00000351288 IFT74Q96LB3 600 aa11.31□□□□□ -0.6
SMPD4-201ENST00000351288 WDR18Q9BV38 432 aa11.31□□□□□ -0.6
SMPD4-201ENST00000351288 ACBD3Q9H3P7 528 aa11.31□□□□□ -0.6
SMPD4-201ENST00000351288 UBE2TQ9NPD8 197 aaPredicted RBP11.31□□□□□ -0.6
SMPD4-201ENST00000351288 MYH4Q9Y623 1939 aa11.31□□□□□ -0.6
SMPD4-201ENST00000351288 KLRG2A4D1S0 409 aaPredicted RBP11.31□□□□□ -0.6
SMPD4-201ENST00000351288 PSMC2P35998 433 aaKnown RBP11.31□□□□□ -0.6
SMPD4-201ENST00000351288 SREBF1P36956 1147 aa11.31□□□□□ -0.6
SMPD4-201ENST00000351288 IRX5P78411 483 aaPredicted RBP11.31□□□□□ -0.6
SMPD4-201ENST00000351288 PSMD2Q13200 908 aa11.31□□□□□ -0.6
SMPD4-201ENST00000351288 SEZ6Q53EL9 994 aa11.31□□□□□ -0.6
SMPD4-201ENST00000351288 ZBTB33Q86T24 672 aa11.31□□□□□ -0.6
SMPD4-201ENST00000351288 KCTD10Q9H3F6 313 aa11.31□□□□□ -0.6
SMPD4-201ENST00000351288 KMT5AQ9NQR1 393 aa11.31□□□□□ -0.6
SMPD4-201ENST00000351288 AGPSO00116 658 aa11.31□□□□□ -0.6
SMPD4-201ENST00000351288 NT5C2P49902 561 aa11.31□□□□□ -0.6
SMPD4-201ENST00000351288 WDR93Q6P2C0 686 aa11.31□□□□□ -0.6
SMPD4-201ENST00000351288 ZNF571Q7Z3V5 609 aaPredicted RBP11.31□□□□□ -0.6
SMPD4-201ENST00000351288 TRIM59Q8IWR1 403 aa11.31□□□□□ -0.6
SMPD4-201ENST00000351288 ARL8AQ96BM9 186 aa11.31□□□□□ -0.6
SMPD4-201ENST00000351288 CCDC113Q9H0I3 377 aa11.31□□□□□ -0.6
SMPD4-201ENST00000351288 PCDHA2Q9Y5H9 948 aa11.31□□□□□ -0.6
SMPD4-201ENST00000351288 MAST2Q6P0Q8 1798 aa11.3□□□□□ -0.6
SMPD4-201ENST00000351288 A0A1W2PQJ5 194 aa11.3□□□□□ -0.6
SMPD4-201ENST00000351288 OPLAHO14841 1288 aa11.3□□□□□ -0.6
SMPD4-201ENST00000351288 NR3C2P08235 984 aa11.3□□□□□ -0.6
SMPD4-201ENST00000351288 TATDN1Q6P1N9 297 aa11.3□□□□□ -0.6
SMPD4-201ENST00000351288 MAATS1Q7Z4T9 603 aa11.3□□□□□ -0.6
SMPD4-201ENST00000351288 DHX37Q8IY37 1157 aaKnown RBP11.3□□□□□ -0.6
SMPD4-201ENST00000351288 ZNF280CQ8ND82 737 aa11.3□□□□□ -0.6
SMPD4-201ENST00000351288 AGBL3Q8NEM8 1001 aa11.3□□□□□ -0.6
SMPD4-201ENST00000351288 RBM46Q8TBY0 533 aaKnown RBP11.3□□□□□ -0.6
SMPD4-201ENST00000351288 PPP1R13LQ8WUF5 828 aa11.3□□□□□ -0.6
SMPD4-201ENST00000351288 COL24A1Q17RW2 1714 aa11.3□□□□□ -0.6
SMPD4-201ENST00000351288 HEXIM1O94992 359 aaKnown RBP11.3□□□□□ -0.6
SMPD4-201ENST00000351288 EYA4O95677 639 aa11.3□□□□□ -0.6
SMPD4-201ENST00000351288 KRT19P08727 400 aa11.3□□□□□ -0.6
SMPD4-201ENST00000351288 QARSP47897 775 aaKnown RBP11.3□□□□□ -0.6
SMPD4-201ENST00000351288 LIG4P49917 911 aa11.3□□□□□ -0.6
SMPD4-201ENST00000351288 MYL7Q01449 175 aa11.3□□□□□ -0.6
SMPD4-201ENST00000351288 DMP1Q13316 513 aaPredicted RBP11.3□□□□□ -0.6
SMPD4-201ENST00000351288 TUBB2AQ13885 445 aa11.3□□□□□ -0.6
SMPD4-201ENST00000351288 PEX26Q7Z412 305 aa11.3□□□□□ -0.6
SMPD4-201ENST00000351288 TRPM4Q8TD43 1214 aa11.3□□□□□ -0.6
SMPD4-201ENST00000351288 AFAP1L1Q8TED9 768 aa11.3□□□□□ -0.6
SMPD4-201ENST00000351288 EXOC4Q96A65 974 aa11.3□□□□□ -0.6
SMPD4-201ENST00000351288 TMEM143Q96AN5 459 aa11.3□□□□□ -0.6
SMPD4-201ENST00000351288 TUBB2BQ9BVA1 445 aa11.3□□□□□ -0.6
SMPD4-201ENST00000351288 TSGA10Q9BZW7 698 aa11.3□□□□□ -0.6
SMPD4-201ENST00000351288 KCNMB3Q9NPA1 279 aa11.3□□□□□ -0.6
SMPD4-201ENST00000351288 TRPC6Q9Y210 931 aa11.3□□□□□ -0.6
SMPD4-201ENST00000351288 RBAK-RBAKDNI3L0D1 243 aa11.3□□□□□ -0.6
SMPD4-201ENST00000351288 GNA14O95837 355 aa11.3□□□□□ -0.6
SMPD4-201ENST00000351288 ACTN2P35609 894 aa11.3□□□□□ -0.6
SMPD4-201ENST00000351288 GNPTABQ3T906 1256 aa11.3□□□□□ -0.6
SMPD4-201ENST00000351288 SUPT20HL1Q3ZLR7 823 aa11.3□□□□□ -0.6
SMPD4-201ENST00000351288 ZNF394Q53GI3 561 aa11.3□□□□□ -0.6
SMPD4-201ENST00000351288 GLYCTKQ8IVS8 523 aa11.3□□□□□ -0.6
SMPD4-201ENST00000351288 LENG9Q96B70 501 aa11.3□□□□□ -0.6
SMPD4-201ENST00000351288 CEP72Q9P209 647 aa11.3□□□□□ -0.6
SMPD4-201ENST00000351288 USTQ9Y2C2 406 aa11.3□□□□□ -0.6
SMPD4-201ENST00000351288 TAF1LQ8IZX4 1826 aa11.3□□□□□ -0.6
SMPD4-201ENST00000351288 ZEB2O60315 1214 aa11.29□□□□□ -0.6
SMPD4-201ENST00000351288 UCHL3P15374 230 aa11.29□□□□□ -0.6
SMPD4-201ENST00000351288 NOVP48745 357 aa11.29□□□□□ -0.6
SMPD4-201ENST00000351288 SPIRE1Q08AE8 756 aa11.29□□□□□ -0.6
SMPD4-201ENST00000351288 MAP9Q49MG5 647 aa11.29□□□□□ -0.6
SMPD4-201ENST00000351288 ALKBH5Q6P6C2 394 aaKnown RBP11.29□□□□□ -0.6
SMPD4-201ENST00000351288 OR2W6PQ8NHA6 318 aa11.29□□□□□ -0.6
SMPD4-201ENST00000351288 DEPTORQ8TB45 409 aa11.29□□□□□ -0.6
SMPD4-201ENST00000351288 ETNPPLQ8TBG4 499 aa11.29□□□□□ -0.6
SMPD4-201ENST00000351288 WNK4Q96J92 1243 aa11.29□□□□□ -0.6
SMPD4-201ENST00000351288 ACP6Q9NPH0 428 aa11.29□□□□□ -0.6
SMPD4-201ENST00000351288 WRAP73Q9P2S5 460 aaPredicted RBP11.29□□□□□ -0.6
SMPD4-201ENST00000351288 DNAJC12Q9UKB3 198 aa11.29□□□□□ -0.6
SMPD4-201ENST00000351288 DENND3A2RUS2 1198 aa11.29□□□□□ -0.6
SMPD4-201ENST00000351288 ADM5C9JUS6 153 aa11.29□□□□□ -0.6
SMPD4-201ENST00000351288 SLITRK3O94933 977 aa11.29□□□□□ -0.6
SMPD4-201ENST00000351288 SERPING1P05155 500 aa11.29□□□□□ -0.6
SMPD4-201ENST00000351288 YWHABP31946 246 aaKnown RBP11.29□□□□□ -0.6
SMPD4-201ENST00000351288 STRN3Q13033 797 aa11.29□□□□□ -0.6
SMPD4-201ENST00000351288 ASTE1Q2TB18 679 aaPredicted RBP11.29□□□□□ -0.6
SMPD4-201ENST00000351288 EPC2Q52LR7 807 aa11.29□□□□□ -0.6
SMPD4-201ENST00000351288 FIGNQ5HY92 759 aa11.29□□□□□ -0.6
SMPD4-201ENST00000351288 FAM71BQ8TC56 605 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms