RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 CCDC74BQ96LY2 380 aa6.47□□□□□ -1.37
RFC1-201ENST00000349703 AKAP7Q9P0M2 348 aaPredicted RBP6.47□□□□□ -1.37
RFC1-201ENST00000349703 MSH6P52701 1360 aa6.46□□□□□ -1.37
RFC1-201ENST00000349703 PSMD14O00487 310 aa6.46□□□□□ -1.37
RFC1-201ENST00000349703 SRGAP3O43295 1099 aa6.46□□□□□ -1.37
RFC1-201ENST00000349703 TIMM44O43615 452 aa6.46□□□□□ -1.37
RFC1-201ENST00000349703 SBK2P0C263 348 aa6.46□□□□□ -1.37
RFC1-201ENST00000349703 RBP3P10745 1247 aa6.46□□□□□ -1.37
RFC1-201ENST00000349703 RAC2P15153 192 aa6.46□□□□□ -1.37
RFC1-201ENST00000349703 VARSP26640 1264 aaKnown RBP6.46□□□□□ -1.37
RFC1-201ENST00000349703 MAGEA9P43362 315 aa6.46□□□□□ -1.37
RFC1-201ENST00000349703 CEBPZQ03701 1054 aaKnown RBP6.46□□□□□ -1.37
RFC1-201ENST00000349703 CBLBQ13191 982 aa6.46□□□□□ -1.37
RFC1-201ENST00000349703 ERCC6LQ2NKX8 1250 aa6.46□□□□□ -1.37
RFC1-201ENST00000349703 AMOTQ4VCS5 1084 aa6.46□□□□□ -1.37
RFC1-201ENST00000349703 TMEM67Q5HYA8 995 aa6.46□□□□□ -1.37
RFC1-201ENST00000349703 AKNAD1Q5T1N1 836 aa6.46□□□□□ -1.37
RFC1-201ENST00000349703 FAM192AQ9GZU8 254 aa6.46□□□□□ -1.37
RFC1-201ENST00000349703 STARD7Q9NQZ5 370 aa6.46□□□□□ -1.37
RFC1-201ENST00000349703 C14orf119Q9NWQ9 140 aa6.46□□□□□ -1.37
RFC1-201ENST00000349703 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.46□□□□□ -1.37
RFC1-201ENST00000349703 ZSWIM5Q9P217 1185 aa6.46□□□□□ -1.37
RFC1-201ENST00000349703 ARPP21Q9UBL0 812 aaPredicted RBP6.46□□□□□ -1.37
RFC1-201ENST00000349703 R3HDM2Q9Y2K5 976 aaKnown RBP6.46□□□□□ -1.37
RFC1-201ENST00000349703 ZNF839A8K0R7 811 aa6.46□□□□□ -1.38
RFC1-201ENST00000349703 SCAMP1O15126 338 aa6.46□□□□□ -1.38
RFC1-201ENST00000349703 GPR182O15218 404 aa6.46□□□□□ -1.38
RFC1-201ENST00000349703 ACTN1P12814 892 aa6.46□□□□□ -1.38
RFC1-201ENST00000349703 RENBPP51606 427 aa6.46□□□□□ -1.38
RFC1-201ENST00000349703 SLC5A3P53794 718 aa6.46□□□□□ -1.38
RFC1-201ENST00000349703 RBM6P78332 1123 aaKnown RBP6.46□□□□□ -1.38
RFC1-201ENST00000349703 PIN1Q13526 163 aaPredicted RBP6.46□□□□□ -1.38
RFC1-201ENST00000349703 MORN1Q5T089 497 aa6.46□□□□□ -1.38
RFC1-201ENST00000349703 RUFY4Q6ZNE9 571 aa6.46□□□□□ -1.38
RFC1-201ENST00000349703 SAMD3Q8N6K7 520 aa6.46□□□□□ -1.38
RFC1-201ENST00000349703 CEP120Q8N960 986 aa6.46□□□□□ -1.38
RFC1-201ENST00000349703 BCAS4Q8TDM0 211 aa6.46□□□□□ -1.38
RFC1-201ENST00000349703 EYA1Q99502 592 aa6.46□□□□□ -1.38
RFC1-201ENST00000349703 GTPBP2Q9BX10 602 aaKnown RBP6.46□□□□□ -1.38
RFC1-201ENST00000349703 DDX21Q9NR30 783 aaKnown RBP eCLIP6.46□□□□□ -1.38
RFC1-201ENST00000349703 AGTPBP1Q9UPW5 1226 aa6.46□□□□□ -1.38
RFC1-201ENST00000349703 DHDHQ9UQ10 334 aa6.46□□□□□ -1.38
RFC1-201ENST00000349703 JRKLQ9Y4A0 524 aa6.46□□□□□ -1.38
RFC1-201ENST00000349703 KIAA1210Q9ULL0 1709 aa6.46□□□□□ -1.38
RFC1-201ENST00000349703 STXBP3O00186 592 aa6.46□□□□□ -1.38
RFC1-201ENST00000349703 EBAG9O00559 213 aa6.46□□□□□ -1.38
RFC1-201ENST00000349703 PRPF4O43172 522 aaKnown RBP eCLIP6.46□□□□□ -1.385e-7■■■■□ 24.4
RFC1-201ENST00000349703 ZNF862O60290 1169 aa6.46□□□□□ -1.38
RFC1-201ENST00000349703 NOL3O60936 208 aaKnown RBP6.46□□□□□ -1.38
RFC1-201ENST00000349703 PYGLP06737 847 aa6.46□□□□□ -1.38
RFC1-201ENST00000349703 PRKAR1BP31321 381 aa6.46□□□□□ -1.38
RFC1-201ENST00000349703 MAP2K2P36507 400 aa6.46□□□□□ -1.38
RFC1-201ENST00000349703 CYP27A1Q02318 531 aa6.46□□□□□ -1.38
RFC1-201ENST00000349703 WTAPQ15007 396 aa6.46□□□□□ -1.38
RFC1-201ENST00000349703 RUFY3Q7L099 469 aa6.46□□□□□ -1.38
RFC1-201ENST00000349703 AFAP1L1Q8TED9 768 aa6.46□□□□□ -1.38
RFC1-201ENST00000349703 NSMCE1Q8WV22 266 aa6.46□□□□□ -1.38
RFC1-201ENST00000349703 MEIS3Q99687 375 aa6.46□□□□□ -1.38
RFC1-201ENST00000349703 FAM118BQ9BPY3 351 aa6.46□□□□□ -1.38
RFC1-201ENST00000349703 SLC35C2Q9NQQ7 365 aa6.46□□□□□ -1.38
RFC1-201ENST00000349703 AASSQ9UDR5 926 aa6.46□□□□□ -1.38
RFC1-201ENST00000349703 SNX14Q9Y5W7 946 aa6.46□□□□□ -1.38
RFC1-201ENST00000349703 KIF1CO43896 1103 aaKnown RBP6.45□□□□□ -1.38
RFC1-201ENST00000349703 TNFRSF21O75509 655 aa6.45□□□□□ -1.38
RFC1-201ENST00000349703 ENDOUP21128 410 aaKnown RBP6.45□□□□□ -1.38
RFC1-201ENST00000349703 GUCY2CP25092 1073 aa6.45□□□□□ -1.38
RFC1-201ENST00000349703 PLA2G7Q13093 441 aa6.45□□□□□ -1.38
RFC1-201ENST00000349703 CAMK2DQ13557 499 aa6.45□□□□□ -1.38
RFC1-201ENST00000349703 KIF22Q14807 665 aa6.45□□□□□ -1.38
RFC1-201ENST00000349703 LRRC41Q15345 812 aa6.45□□□□□ -1.38
RFC1-201ENST00000349703 DUOXA2Q1HG44 320 aa6.45□□□□□ -1.38
RFC1-201ENST00000349703 KIF4BQ2VIQ3 1234 aa6.45□□□□□ -1.38
RFC1-201ENST00000349703 KIF6Q6ZMV9 814 aa6.45□□□□□ -1.38
RFC1-201ENST00000349703 PIP4P2Q8N4L2 257 aa6.45□□□□□ -1.38
RFC1-201ENST00000349703 SLC43A3Q8NBI5 491 aa6.45□□□□□ -1.38
RFC1-201ENST00000349703 OR6J1Q8NGC5 347 aa6.45□□□□□ -1.38
RFC1-201ENST00000349703 ZSCAN18Q8TBC5 510 aaPredicted RBP6.45□□□□□ -1.38
RFC1-201ENST00000349703 CCDC12Q8WUD4 166 aaPredicted RBP6.45□□□□□ -1.38
RFC1-201ENST00000349703 ATP2A3Q93084 1043 aa6.45□□□□□ -1.38
RFC1-201ENST00000349703 TDP1Q9NUW8 608 aa6.45□□□□□ -1.38
RFC1-201ENST00000349703 RNF19AQ9NV58 838 aa6.45□□□□□ -1.38
RFC1-201ENST00000349703 C9orf78Q9NZ63 289 aaPredicted RBP6.45□□□□□ -1.38
RFC1-201ENST00000349703 MRPL15Q9P015 296 aaKnown RBP6.45□□□□□ -1.38
RFC1-201ENST00000349703 MTMR6Q9Y217 621 aa6.45□□□□□ -1.38
RFC1-201ENST00000349703 TRAF6Q9Y4K3 522 aa6.45□□□□□ -1.38
RFC1-201ENST00000349703 CAPN7Q9Y6W3 813 aa6.45□□□□□ -1.38
RFC1-201ENST00000349703 ZSCAN9O15535 394 aaPredicted RBP6.45□□□□□ -1.38
RFC1-201ENST00000349703 ETV3P41162 512 aa6.45□□□□□ -1.38
RFC1-201ENST00000349703 GFPT1Q06210 699 aaPredicted RBP6.45□□□□□ -1.38
RFC1-201ENST00000349703 BFSP1Q12934 665 aa6.45□□□□□ -1.38
RFC1-201ENST00000349703 SPIDRQ14159 915 aa6.45□□□□□ -1.38
RFC1-201ENST00000349703 BRAPQ7Z569 592 aa6.45□□□□□ -1.38
RFC1-201ENST00000349703 SCUBE1Q8IWY4 988 aa6.45□□□□□ -1.38
RFC1-201ENST00000349703 CACTINQ8WUQ7 758 aaKnown RBP6.45□□□□□ -1.38
RFC1-201ENST00000349703 CFAP57Q96MR6 1250 aa6.45□□□□□ -1.38
RFC1-201ENST00000349703 THUMPD2Q9BTF0 503 aaKnown RBP6.45□□□□□ -1.38
RFC1-201ENST00000349703 C12orf65Q9H3J6 166 aaKnown RBP6.45□□□□□ -1.38
RFC1-201ENST00000349703 CTAGE15A4D2H0 777 aa6.45□□□□□ -1.38
RFC1-201ENST00000349703 CTAGE8P0CG41 777 aa6.45□□□□□ -1.38
RFC1-201ENST00000349703 MTHFD2P13995 350 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms