RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 SARSP49591 514 aaKnown RBP17.59■□□□□ 0.41
TSPAN4-201ENST00000346501 BTG3Q14201 252 aaPredicted RBP17.59■□□□□ 0.41
TSPAN4-201ENST00000346501 FAM228AQ86W67 206 aa17.59■□□□□ 0.41
TSPAN4-201ENST00000346501 FBXO22Q8NEZ5 403 aa17.59■□□□□ 0.41
TSPAN4-201ENST00000346501 SP7Q8TDD2 431 aaPredicted RBP17.59■□□□□ 0.41
TSPAN4-201ENST00000346501 TMEM40Q8WWA1 233 aa17.59■□□□□ 0.41
TSPAN4-201ENST00000346501 NLRP4Q96MN2 994 aa17.59■□□□□ 0.41
TSPAN4-201ENST00000346501 NACC1Q96RE7 527 aa17.59■□□□□ 0.41
TSPAN4-201ENST00000346501 ADAMTS10Q9H324 1103 aa17.59■□□□□ 0.41
TSPAN4-201ENST00000346501 DACT1Q9NYF0 836 aa17.59■□□□□ 0.41
TSPAN4-201ENST00000346501 MTUS1Q9ULD2 1270 aa17.59■□□□□ 0.41
TSPAN4-201ENST00000346501 ADGRA3Q8IWK6 1321 aa17.58■□□□□ 0.4
TSPAN4-201ENST00000346501 DGAT1O75907 488 aa17.58■□□□□ 0.4
TSPAN4-201ENST00000346501 MUTP22033 750 aa17.58■□□□□ 0.4
TSPAN4-201ENST00000346501 NCBP1Q09161 790 aaKnown RBP17.58■□□□□ 0.4
TSPAN4-201ENST00000346501 PTGDRQ13258 359 aa17.58■□□□□ 0.4
TSPAN4-201ENST00000346501 TFDP1Q14186 410 aa17.58■□□□□ 0.4
TSPAN4-201ENST00000346501 PDIA5Q14554 519 aa17.58■□□□□ 0.4
TSPAN4-201ENST00000346501 MXD4Q14582 209 aaPredicted RBP17.58■□□□□ 0.4
TSPAN4-201ENST00000346501 EMC2Q15006 297 aa17.58■□□□□ 0.4
TSPAN4-201ENST00000346501 MICALL1Q8N3F8 863 aa17.58■□□□□ 0.4
TSPAN4-201ENST00000346501 PPM1EQ8WY54 764 aa17.58■□□□□ 0.4
TSPAN4-201ENST00000346501 ZNF668Q96K58 619 aaPredicted RBP17.58■□□□□ 0.4
TSPAN4-201ENST00000346501 POLR3CQ9BUI4 534 aaPredicted RBP17.58■□□□□ 0.4
TSPAN4-201ENST00000346501 DHX33Q9H6R0 707 aaKnown RBP17.58■□□□□ 0.4
TSPAN4-201ENST00000346501 ATP6V0A4Q9HBG4 840 aa17.58■□□□□ 0.4
TSPAN4-201ENST00000346501 RGS18Q9NS28 235 aa17.58■□□□□ 0.4
TSPAN4-201ENST00000346501 WRAP73Q9P2S5 460 aaPredicted RBP17.58■□□□□ 0.4
TSPAN4-201ENST00000346501 LRWD1Q9UFC0 647 aa17.58■□□□□ 0.4
TSPAN4-201ENST00000346501 COL4A3BPQ9Y5P4 624 aa17.58■□□□□ 0.4
TSPAN4-201ENST00000346501 SIP14410 1827 aa17.57■□□□□ 0.4
TSPAN4-201ENST00000346501 A0A087WZ62 844 aa17.57■□□□□ 0.4
TSPAN4-201ENST00000346501 HOXA2O43364 376 aa17.57■□□□□ 0.4
TSPAN4-201ENST00000346501 RPA1P27694 616 aa17.57■□□□□ 0.4
TSPAN4-201ENST00000346501 FXR2P51116 673 aaKnown RBP eCLIP17.57■□□□□ 0.4
TSPAN4-201ENST00000346501 CUL4AQ13619 759 aa17.57■□□□□ 0.4
TSPAN4-201ENST00000346501 PTPROQ16827 1216 aa17.57■□□□□ 0.4
TSPAN4-201ENST00000346501 DTHD1Q6ZMT9 781 aa17.57■□□□□ 0.4
TSPAN4-201ENST00000346501 CEP89Q96ST8 783 aa17.57■□□□□ 0.4
TSPAN4-201ENST00000346501 FDXACB1Q9BRP7 624 aaPredicted RBP17.57■□□□□ 0.4
TSPAN4-201ENST00000346501 CHST12Q9NRB3 414 aa17.57■□□□□ 0.4
TSPAN4-201ENST00000346501 LMCD1Q9NZU5 365 aa17.57■□□□□ 0.4
TSPAN4-201ENST00000346501 PCDHB6Q9Y5E3 794 aa17.57■□□□□ 0.4
TSPAN4-201ENST00000346501 VPS37CA5D8V6 355 aaPredicted RBP17.56■□□□□ 0.4
TSPAN4-201ENST00000346501 K7ELQ4 463 aaPredicted RBP17.56■□□□□ 0.4
TSPAN4-201ENST00000346501 DGKIO75912 1065 aa17.56■□□□□ 0.4
TSPAN4-201ENST00000346501 BMP15O95972 392 aa17.56■□□□□ 0.4
TSPAN4-201ENST00000346501 HSP90AA1P07900 732 aaKnown RBP17.56■□□□□ 0.4
TSPAN4-201ENST00000346501 SKIP12755 728 aa17.56■□□□□ 0.4
TSPAN4-201ENST00000346501 CCT6AP40227 531 aaKnown RBP17.56■□□□□ 0.4
TSPAN4-201ENST00000346501 PRPHP41219 470 aa17.56■□□□□ 0.4
TSPAN4-201ENST00000346501 PHKA2P46019 1235 aa17.56■□□□□ 0.4
TSPAN4-201ENST00000346501 DRP2Q13474 957 aa17.56■□□□□ 0.4
TSPAN4-201ENST00000346501 KRT79Q5XKE5 535 aa17.56■□□□□ 0.4
TSPAN4-201ENST00000346501 CATSPER4Q7RTX7 472 aa17.56■□□□□ 0.4
TSPAN4-201ENST00000346501 BRAPQ7Z569 592 aa17.56■□□□□ 0.4
TSPAN4-201ENST00000346501 SRGAP1Q7Z6B7 1085 aa17.56■□□□□ 0.4
TSPAN4-201ENST00000346501 RTN4RL1Q86UN2 441 aaPredicted RBP17.56■□□□□ 0.4
TSPAN4-201ENST00000346501 CMTR2Q8IYT2 770 aaKnown RBP17.56■□□□□ 0.4
TSPAN4-201ENST00000346501 ABI1Q8IZP0 508 aa17.56■□□□□ 0.4
TSPAN4-201ENST00000346501 TMEM143Q96AN5 459 aa17.56■□□□□ 0.4
TSPAN4-201ENST00000346501 INTS4Q96HW7 963 aaKnown RBP17.56■□□□□ 0.4
TSPAN4-201ENST00000346501 TMX1Q9H3N1 280 aa17.56■□□□□ 0.4
TSPAN4-201ENST00000346501 ELAC1Q9H777 363 aaKnown RBP17.56■□□□□ 0.4
TSPAN4-201ENST00000346501 BMP2KQ9NSY1 1161 aaPredicted RBP17.56■□□□□ 0.4
TSPAN4-201ENST00000346501 PTPRSQ13332 1948 aa17.55■□□□□ 0.4
TSPAN4-201ENST00000346501 LOXHD1Q8IVV2 1947 aa17.55■□□□□ 0.4
TSPAN4-201ENST00000346501 ARHGEF35A5YM69 484 aa17.55■□□□□ 0.4
TSPAN4-201ENST00000346501 RB1P06400 928 aa17.55■□□□□ 0.4
TSPAN4-201ENST00000346501 SRGAP2CP0DJJ0 459 aa17.55■□□□□ 0.4
TSPAN4-201ENST00000346501 CTNNB1P35222 781 aa17.55■□□□□ 0.4
TSPAN4-201ENST00000346501 RARRES1P49788 294 aa17.55■□□□□ 0.4
TSPAN4-201ENST00000346501 GRB10Q13322 594 aa17.55■□□□□ 0.4
TSPAN4-201ENST00000346501 ADGRE1Q14246 886 aa17.55■□□□□ 0.4
TSPAN4-201ENST00000346501 NBR1Q14596 966 aa17.55■□□□□ 0.4
TSPAN4-201ENST00000346501 SKIV2LQ15477 1246 aaKnown RBP17.55■□□□□ 0.4
TSPAN4-201ENST00000346501 SPOUT1Q5T280 376 aaKnown RBP17.55■□□□□ 0.4
TSPAN4-201ENST00000346501 CATSPER3Q86XQ3 398 aa17.55■□□□□ 0.4
TSPAN4-201ENST00000346501 HSCBQ8IWL3 235 aa17.55■□□□□ 0.4
TSPAN4-201ENST00000346501 TMEM192Q8IY95 271 aa17.55■□□□□ 0.4
TSPAN4-201ENST00000346501 MCPH1Q8NEM0 835 aa17.55■□□□□ 0.4
TSPAN4-201ENST00000346501 PIGOQ8TEQ8 1089 aa17.55■□□□□ 0.4
TSPAN4-201ENST00000346501 PRPF31Q8WWY3 499 aaKnown RBP17.55■□□□□ 0.4
TSPAN4-201ENST00000346501 LINC01599Q8WXQ3 324 aa17.55■□□□□ 0.4
TSPAN4-201ENST00000346501 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.55■□□□□ 0.4
TSPAN4-201ENST00000346501 AAASQ9NRG9 546 aa17.55■□□□□ 0.4
TSPAN4-201ENST00000346501 TMEM161AQ9NX61 479 aa17.55■□□□□ 0.4
TSPAN4-201ENST00000346501 DBR1Q9UK59 544 aaKnown RBP17.55■□□□□ 0.4
TSPAN4-201ENST00000346501 TTC3P53804 2025 aa17.55■□□□□ 0.4
TSPAN4-201ENST00000346501 C9IYK1 514 aa17.54■□□□□ 0.4
TSPAN4-201ENST00000346501 RFXAPO00287 272 aa17.54■□□□□ 0.4
TSPAN4-201ENST00000346501 ERLIN2O94905 339 aa17.54■□□□□ 0.4
TSPAN4-201ENST00000346501 ARHGEF15O94989 841 aa17.54■□□□□ 0.4
TSPAN4-201ENST00000346501 POU3F3P20264 500 aaPredicted RBP17.54■□□□□ 0.4
TSPAN4-201ENST00000346501 TOB1P50616 345 aaPredicted RBP17.54■□□□□ 0.4
TSPAN4-201ENST00000346501 LAMTOR4Q0VGL1 99 aa17.54■□□□□ 0.4
TSPAN4-201ENST00000346501 PCBP1Q15365 356 aaKnown RBP eCLIP17.54■□□□□ 0.4
TSPAN4-201ENST00000346501 CCDC85BQ15834 202 aaPredicted RBP17.54■□□□□ 0.4
TSPAN4-201ENST00000346501 EPC2Q52LR7 807 aa17.54■□□□□ 0.4
TSPAN4-201ENST00000346501 TWF2Q6IBS0 349 aaKnown RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms